EY679003

Overview
NameEY679003
Unique NameEY679003
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS1_STRP8 (Formate--tetrahydrofolate ligase 1 OS=Streptococcus pyogenes serotype M18 GN=fhs1 PE=3 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 9.101e-13
Identity = 34/101 (33.66%), Postives = 57/101 (56.44%), Query Frame = 2
Query:   35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEK-IDTIARSYGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRD 334
            G +G + L     R  +      K LY  + +++EK I+ + + YG   V++  +A+ Q++ +   G+  LP+CMA TQYSFS + +  GAPT F + IR+
Sbjct:  412 GAEGGLALAKTAVRVIDQEAADYKRLYSDEDTLEEKVINIVTQIYGGKAVQFGPKAKTQLKQFAEFGWDKLPVCMAKTQYSFSDNPSLLGAPTDFDITIRE 512          

HSP 2 Score: 30.8018 bits (68), Expect = 9.101e-13
Identity = 14/25 (56.00%), Postives = 16/25 (64.00%), Query Frame = 3
Query:  351 GAGFIYPLVGTMSTMPGLPIRPCLL 425
            GAGFI  L G + TMPGLP  P  +
Sbjct:  518 GAGFIVGLTGDVMTMPGLPKVPAAM 542          
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_BART1 (Formate--tetrahydrofolate ligase OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=fhs PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.950e-13
Identity = 42/103 (40.78%), Postives = 56/103 (54.37%), Query Frame = 2
Query:   35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTI-ARSYGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDVK 340
            GGKGAV L   +    E      K LY  D+ + +KI+ I  + YG  G   S    KQ+E +  +GF   PICMA T YSFS D  + GAP  F +P+R+V+
Sbjct:  413 GGKGAVALAQELVTLIEKQDSDFKVLYQDDIPLVQKINCIITKLYGGRGAIISATILKQLESWEKEGFGTYPICMAKTPYSFSADPKQYGAPVDFEIPVREVR 515          
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS1_STRPF (Formate--tetrahydrofolate ligase 1 OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=fhs1 PE=3 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 1.182e-12
Identity = 34/101 (33.66%), Postives = 57/101 (56.44%), Query Frame = 2
Query:   35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEK-IDTIARSYGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRD 334
            G +G + L   V R  +      K LY  + +++EK I+ + + Y    V++  +A+ Q++ +   G+  LP+CMA TQYSFS + +  GAPT F + IR+
Sbjct:  412 GAEGGIALAKTVVRVIDQEAADYKRLYSDEDTLEEKVINIVTQIYDGKAVQFGPKAKTQLKQFAEFGWDKLPVCMAKTQYSFSDNPSLLGAPTDFDITIRE 512          

HSP 2 Score: 30.8018 bits (68), Expect = 1.182e-12
Identity = 14/25 (56.00%), Postives = 16/25 (64.00%), Query Frame = 3
Query:  351 GAGFIYPLVGTMSTMPGLPIRPCLL 425
            GAGFI  L G + TMPGLP  P  +
Sbjct:  518 GAGFIVGLTGDVMTMPGLPKVPAAM 542          
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_THESQ (Formate--tetrahydrofolate ligase OS=Thermotoga sp. (strain RQ2) GN=fhs PE=3 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 1.183e-12
Identity = 35/102 (34.31%), Postives = 62/102 (60.78%), Query Frame = 2
Query:   35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDV 337
            G +G V+L  AV  A ++V +P+ +LY ++  +++KI+ +A+  Y A  VE+S+ A+  ++     GF  LP+ +A T  S SHD + +GAP G+   + D+
Sbjct:  400 GSEGGVELAKAVTEAVKDV-KPV-YLYEMNDPVEKKIEILAKEIYRAGRVEFSDTAKNALKFIKKHGFDELPVIVAKTPKSISHDPSLRGAPEGYTFVVSDL 499          

HSP 2 Score: 32.3426 bits (72), Expect = 1.183e-12
Identity = 14/24 (58.33%), Postives = 17/24 (70.83%), Query Frame = 3
Query:  345 SIGAGFIYPLVGTMSTMPGLPIRP 416
            S GAGF+  L G ++ MPGLP RP
Sbjct:  502 SAGAGFVVALSGDINLMPGLPERP 525          
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_THEP1 (Formate--tetrahydrofolate ligase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=fhs PE=3 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 1.183e-12
Identity = 35/102 (34.31%), Postives = 62/102 (60.78%), Query Frame = 2
Query:   35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDV 337
            G +G V+L  AV  A ++V +P+ +LY ++  +++KI+ +A+  Y A  VE+S+ A+  ++     GF  LP+ +A T  S SHD + +GAP G+   + D+
Sbjct:  400 GSEGGVELAKAVTEAVKDV-KPV-YLYEMNDPVEKKIEILAKEIYRAGRVEFSDTAKNALKFIKKHGFDELPVIVAKTPKSISHDPSLRGAPEGYTFVVSDL 499          

HSP 2 Score: 32.3426 bits (72), Expect = 1.183e-12
Identity = 14/24 (58.33%), Postives = 17/24 (70.83%), Query Frame = 3
Query:  345 SIGAGFIYPLVGTMSTMPGLPIRP 416
            S GAGF+  L G ++ MPGLP RP
Sbjct:  502 SAGAGFVVALSGDINLMPGLPERP 525          
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_CLOCE (Formate--tetrahydrofolate ligase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=fhs PE=3 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 1.535e-12
Identity = 35/103 (33.98%), Postives = 53/103 (51.46%), Query Frame = 2
Query:   35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTI-ARSYGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDVK 340
            GG+G ++L   +    ++       +Y   + IKEK+  I ++ YG   V Y+  AEK I      G   LPICMA TQYS S + A  G P  F + +++V+
Sbjct:  412 GGEGGIELAEKLVALTDSTVSNFAPIYDEKLPIKEKVQQIVSKIYGGRNVIYNAAAEKSIAKIEEMGLDRLPICMAKTQYSLSDNPALLGRPQDFDVTVKEVR 514          

HSP 2 Score: 32.7278 bits (73), Expect = 1.535e-12
Identity = 16/30 (53.33%), Postives = 18/30 (60.00%), Query Frame = 3
Query:  339 RASIGAGFIYPLVGTMSTMPGLPIRPCLLR 428
            R S GAGF+  L G + TMPGLP  P   R
Sbjct:  514 RISAGAGFLVVLTGDIMTMPGLPKVPAAER 543          
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_THEMA (Formate--tetrahydrofolate ligase OS=Thermotoga maritima GN=fhs PE=1 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 2.589e-12
Identity = 34/102 (33.33%), Postives = 59/102 (57.84%), Query Frame = 2
Query:   35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDV 337
            G +G V+L  AV  A ++V     +LY ++  +++KI+ +A+  Y A  VE+S+ A+  ++     GF  LP+ +A T  S SHD + +GAP G+   + D+
Sbjct:  400 GSEGGVELAKAVAEAAKDVEPA--YLYEMNDPVEKKIEILAKEIYRAGRVEFSDTAKNALKFIKKHGFDELPVIVAKTPKSISHDPSLRGAPEGYTFVVSDL 499          

HSP 2 Score: 31.187 bits (69), Expect = 2.589e-12
Identity = 13/24 (54.17%), Postives = 17/24 (70.83%), Query Frame = 3
Query:  345 SIGAGFIYPLVGTMSTMPGLPIRP 416
            S GAGF+  L G ++ MPGLP +P
Sbjct:  502 SAGAGFVVALSGDINLMPGLPKKP 525          
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_METSB (Formate--tetrahydrofolate ligase OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=fhs PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.895e-12
Identity = 41/103 (39.81%), Postives = 56/103 (54.37%), Query Frame = 2
Query:   35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIA-RSYGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDVK 340
            GGKGA DL   V    + V     F+Y    S+ +K   +A + YGA+ V    +   QI+     G+   PIC+A TQYSFS DA  +GAPTG  + IR+V+
Sbjct:  414 GGKGAEDLARVVVEMIDKVPSDFHFVYEDSASLWDKATAVATKLYGATKVTADAKVRNQIKKLEESGYGNFPICIAKTQYSFSTDAKLRGAPTGHDINIREVR 516          
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_BACFR (Formate--tetrahydrofolate ligase OS=Bacteroides fragilis GN=fhs PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.895e-12
Identity = 43/103 (41.75%), Postives = 61/103 (59.22%), Query Frame = 2
Query:   35 GGKGAVDLGIAVQRACENV-TQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDV 337
            GG+GAVDL   V    EN  ++PL+F Y  + S+++KI+ +A + YGAS V YS     +I++    G    P+C+A TQYSFS D    GA   F L I+D+
Sbjct:  411 GGEGAVDLANLVVETIENKPSEPLQFTYNDEDSVQQKIEKVATNLYGASVVTYSTLTRNKIKLIEEMGIGHYPVCIAKTQYSFSADPKVYGAVDNFELHIKDI 513          
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_BACFN (Formate--tetrahydrofolate ligase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=fhs PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.895e-12
Identity = 43/103 (41.75%), Postives = 61/103 (59.22%), Query Frame = 2
Query:   35 GGKGAVDLGIAVQRACENV-TQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDV 337
            GG+GAVDL   V    EN  ++PL+F Y  + S+++KI+ +A + YGAS V YS     +I++    G    P+C+A TQYSFS D    GA   F L I+D+
Sbjct:  411 GGEGAVDLANLVVETIENKPSEPLQFTYNDEDSVQQKIEKVATNLYGASVVTYSTLTRNKIKLIEEMGIGHYPVCIAKTQYSFSADPKVYGAVDNFELHIKDI 513          
The following BLAST results are available for this feature:
BLAST of EY679003 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 293
Match NameE-valueIdentityDescription
FTHS1_STRP89.101e-1333.66Formate--tetrahydrofolate ligase 1 OS=Streptococcu... [more]
FTHS_BART19.950e-1340.78Formate--tetrahydrofolate ligase OS=Bartonella tri... [more]
FTHS1_STRPF1.182e-1233.66Formate--tetrahydrofolate ligase 1 OS=Streptococcu... [more]
FTHS_THESQ1.183e-1234.31Formate--tetrahydrofolate ligase OS=Thermotoga sp.... [more]
FTHS_THEP11.183e-1234.31Formate--tetrahydrofolate ligase OS=Thermotoga pet... [more]
FTHS_CLOCE1.535e-1233.98Formate--tetrahydrofolate ligase OS=Clostridium ce... [more]
FTHS_THEMA2.589e-1233.33Formate--tetrahydrofolate ligase OS=Thermotoga mar... [more]
FTHS_METSB2.895e-1239.81Formate--tetrahydrofolate ligase OS=Methylocella s... [more]
FTHS_BACFR2.895e-1241.75Formate--tetrahydrofolate ligase OS=Bacteroides fr... [more]
FTHS_BACFN2.895e-1241.75Formate--tetrahydrofolate ligase OS=Bacteroides fr... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-053-H07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679003 ID=EY679003; Name=EY679003; organism=Citrus sinensis; type=EST; length=876bp
GCCAGTTTAGTTTTCGTTCTCACCATCGCCCATGGGTGGAAAAGGAGCAG
TGGACCTTGGAATTGCAGTTCAAAGAGCCTGTGAGAATGTTACACAGCCA
TTGAAGTTCTTATATCCTTTAGATGTCAGTATTAAAGAGAAAATAGATAC
AATAGCAAGGTCATATGGTGCTAGCGGCGTTGAGTACTCAGAGGAGGCTG
AGAAACAGATCGAAATGTACACCGGGCAAGGGTTTTCTGGCTTACCAATT
TGCATGGCATAAACCCAGTATTCATTTTCACACGATGCCGCCGAGAAGGG
AGCCCCAACTGGGTTTATCTTACCGATAAGGGATGTAAAGAGCTAGCATT
GGGGCTGGATTCATTTATCCTTTGGTTGGAACAATGAGTACAATGCCAGG
TCTCCCAATAAGGCCATGCCTTTTAAGAGAATGGAGTCAACACTGCAACT
GGAAAGGTTGTTGGGGCTGTCTTAAGATCCCACAAAGCACTCCCGTGTGG
GTCCTCAAGAAGCTCTCCTTTAGATGTTCTTAAATGCTCCTGAGCAAACA
ATGAGCTTGAAGGGCTCCCCCCCCCCCCCACTGGCTGATATTCTAACCCC
GATCTGTAACACTTATGGGTACCTCGGGCTATTTGCTGTGGTAAACAAAA
CCCGACACCAAATAGAACCTGGAAAAAAAAAATCTTGGTACTCACCTTGC
GGACTTTAATTTTCCCTATTAATGTGTCCTTACTCCCATTTGATCTTGAA
TCCCGTTACGAAAATTTACCCTATGGGTGGGGGTGTGATATTTGTAAAAT
AAACAAAAAAAAAAAAAAAATAAAATAAAAGCAAAAGGGCGCGGGCGCGG
GTTAATAAATTATGAAAGGTATCAGA
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