EY679003
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_SHESW (Formate--tetrahydrofolate ligase OS=Shewanella sp. (strain W3-18-1) GN=fhs PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 5.743e-21 Identity = 44/100 (44.00%), Postives = 65/100 (65.00%), Query Frame = 2 Query: 35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIAR-SYGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIR 331 G GA++L V RA + +Q + LYP D S++ K+ T+A YGA+G+ S+EA++Q+ +T G++ LP+CMA T S SHD +KG P FI+PIR Sbjct: 427 GEAGAIELAYTVVRAADTQSQ-FRLLYPDDASLEAKLSTLAEVGYGAAGISLSDEAKQQVREFTSLGYAYLPVCMAKTPLSISHDPMQKGVPKDFIVPIR 525 HSP 2 Score: 33.8834 bits (76), Expect = 5.743e-21 Identity = 15/26 (57.69%), Postives = 19/26 (73.08%), Query Frame = 3 Query: 351 GAGFIYPLVGTMSTMPGLPIRPCLLR 428 GAGF+ LVG + TMPGL I+P L+ Sbjct: 532 GAGFVTALVGNVMTMPGLGIKPGYLK 557
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_SACEN (Formate--tetrahydrofolate ligase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=fhs PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 5.744e-21 Identity = 45/104 (43.27%), Postives = 62/104 (59.62%), Query Frame = 2 Query: 35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIA-RSYGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDVKS 343 GGKGA++L V A E + + LYP ++ KI+TIA R YGA GV Y A + + Y GF LP+C+A T S S D + GAPTG+ LP+R+V++ Sbjct: 422 GGKGALELAEVVVEAAEEPNR-FRLLYPDSADLRTKIETIATRVYGADGVSYQPAAARALADYEAIGFGSLPVCIAKTHLSLSSDPSLLGAPTGWTLPVREVRA 524 HSP 2 Score: 39.2762 bits (90), Expect = 5.744e-21 Identity = 19/30 (63.33%), Postives = 20/30 (66.67%), Query Frame = 3 Query: 339 RASIGAGFIYPLVGTMSTMPGLPIRPCLLR 428 RASIGAGFIY + G M TMPGL P R Sbjct: 523 RASIGAGFIYAICGEMRTMPGLGSHPAAER 552
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_SHEPC (Formate--tetrahydrofolate ligase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=fhs PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 7.470e-21 Identity = 44/100 (44.00%), Postives = 65/100 (65.00%), Query Frame = 2 Query: 35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIAR-SYGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIR 331 G GA++L V RA + +Q + LYP D S++ K+ T+A YGA+G+ S+EA++Q+ +T G++ LP+CMA T S SHD +KG P FI+PIR Sbjct: 427 GEAGAIELAHTVVRAADTQSQ-FRLLYPDDASLEAKLSTLAEVGYGAAGISLSDEAKQQVREFTSLGYAHLPVCMAKTPLSISHDPIQKGVPKDFIVPIR 525 HSP 2 Score: 33.8834 bits (76), Expect = 7.470e-21 Identity = 15/26 (57.69%), Postives = 19/26 (73.08%), Query Frame = 3 Query: 351 GAGFIYPLVGTMSTMPGLPIRPCLLR 428 GAGF+ LVG + TMPGL I+P L+ Sbjct: 532 GAGFVTALVGNVMTMPGLGIKPGYLK 557
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_HALOH (Formate--tetrahydrofolate ligase OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=fhs PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.265e-20 Identity = 45/102 (44.12%), Postives = 62/102 (60.78%), Query Frame = 2 Query: 35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDV 337 GG+G +DL + EN +LY ++ I +KI+ IA+ YGA GV Y+ +A KQI+ YT G+ LPICMA TQ S S D + KG P GF + +R+V Sbjct: 410 GGEGGLDLARKLVDVLENTPGQFSYLYDVNFPITDKIEKIAKEIYGADGVNYTSKALKQIDKYTELGYDKLPICMAKTQSSISDDPSLKGRPRGFRINVREV 511 HSP 2 Score: 36.5798 bits (83), Expect = 1.265e-20 Identity = 16/24 (66.67%), Postives = 18/24 (75.00%), Query Frame = 3 Query: 345 SIGAGFIYPLVGTMSTMPGLPIRP 416 S GAGFI PL G + TMPGLP +P Sbjct: 514 SAGAGFIIPLTGPVLTMPGLPKKP 537
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_LACPL (Formate--tetrahydrofolate ligase OS=Lactobacillus plantarum GN=fhs PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.645e-20 Identity = 47/103 (45.63%), Postives = 62/103 (60.19%), Query Frame = 2 Query: 35 GGKGAVDLGIAVQRACENVTQPLKF--LYPLDVSIKEKI-DTIARSYGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRD 334 GG GA DL AV C QP F L P D +K KI D + ++YG + VEYS +A++Q+ + QG+ LP+CMA TQYS S D GAPTGF + +R+ Sbjct: 408 GGDGATDLAAAVVDLC---AQPSHFQPLSPADADLKTKINDIVTKTYGGANVEYSAKAQRQLRTFAKQGWDHLPVCMAKTQYSLSDDPKRLGAPTGFTINVRE 507 HSP 2 Score: 33.8834 bits (76), Expect = 1.645e-20 Identity = 15/26 (57.69%), Postives = 17/26 (65.38%), Query Frame = 3 Query: 348 IGAGFIYPLVGTMSTMPGLPIRPCLL 425 +GAGFI L G + TMPGLP P L Sbjct: 512 LGAGFIVALTGNVLTMPGLPKHPAAL 537
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS1_DESHY (Formate--tetrahydrofolate ligase 1 OS=Desulfitobacterium hafniense (strain Y51) GN=fhs1 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.707e-20 Identity = 41/103 (39.81%), Postives = 62/103 (60.19%), Query Frame = 2 Query: 35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDVK 340 GG+G ++L AV +N LY LD+ I +KI+TI + YGA GV +++EA ++ Y G+ LPICMA TQYS + D G P+GF + +R+++ Sbjct: 412 GGEGGIELAKAVLNIVDNKESNFHVLYELDLPIAKKIETICKEVYGADGVNFTKEALTSMKKYEELGYGQLPICMAKTQYSLTDDQNVLGRPSGFTITVRELR 514 HSP 2 Score: 38.5058 bits (88), Expect = 4.707e-20 Identity = 17/30 (56.67%), Postives = 20/30 (66.67%), Query Frame = 3 Query: 339 RASIGAGFIYPLVGTMSTMPGLPIRPCLLR 428 R S GAGF+ + G + TMPGLP RP LR Sbjct: 514 RLSAGAGFLVAITGAIMTMPGLPKRPAALR 543
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_ARTS2 (Formate--tetrahydrofolate ligase OS=Arthrobacter sp. (strain FB24) GN=fhs PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.120e-20 Identity = 45/102 (44.12%), Postives = 64/102 (62.75%), Query Frame = 2 Query: 35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDV 337 GG G +L V A E + LYPL++S+++KI TI + YGA GV++S A K++ G++G+P+CMA TQYSFS DA GAP GF + +RD+ Sbjct: 422 GGDGGDELAAKVLAALE-APHSFRHLYPLELSVEDKIRTIVQEMYGADGVDFSVPALKRLAEIEKNGWAGMPVCMAKTQYSFSDDATRLGAPKGFTVHVRDL 522 HSP 2 Score: 34.2686 bits (77), Expect = 6.120e-20 Identity = 16/26 (61.54%), Postives = 17/26 (65.38%), Query Frame = 3 Query: 351 GAGFIYPLVGTMSTMPGLPIRPCLLR 428 GAGFI L G + TMPGLP P LR Sbjct: 527 GAGFIVALTGAVMTMPGLPKVPAALR 552
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_EUBR3 (Formate--tetrahydrofolate ligase OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=fhs PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 6.122e-20 Identity = 45/102 (44.12%), Postives = 63/102 (61.76%), Query Frame = 2 Query: 35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDV 337 GG+G +DL V E+ K LY +S+KEKI+T+A+ YGA GV YS AE++++ T G P+CMA TQYS S DA + G P+GF + +R+V Sbjct: 412 GGEGGIDLANKVLETIEHKESNFKVLYDDSLSLKEKIETVAKEIYGADGVTYSPAAERELKRITDLGMGDFPVCMAKTQYSLSDDAKKLGRPSGFKINVREV 513 HSP 2 Score: 30.4166 bits (67), Expect = 6.122e-20 Identity = 13/25 (52.00%), Postives = 18/25 (72.00%), Query Frame = 3 Query: 342 ASIGAGFIYPLVGTMSTMPGLPIRP 416 AS GAGF+ + G++ TMPGL +P Sbjct: 515 ASAGAGFVVAVNGSIMTMPGLSKKP 539
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_EUBAC (Formate--tetrahydrofolate ligase OS=Eubacterium acidaminophilum GN=fhs PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 6.122e-20 Identity = 44/103 (42.72%), Postives = 64/103 (62.14%), Query Frame = 2 Query: 35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDVK 340 GG+G V+L V E K LYP ++ +K+KI+TIA+ Y A GVE+S +A K+++ + GF LPIC+A TQYSFS + KGAP GF + + + + Sbjct: 412 GGEGGVELAKKVVEVTEKGAAKFKPLYPAEMPLKQKIETIAKEIYRADGVEFSAKASKELDKFEKLGFGNLPICVAKTQYSFSDNPNLKGAPKGFTVSVSNAR 514 HSP 2 Score: 33.113 bits (74), Expect = 6.122e-20 Identity = 16/26 (61.54%), Postives = 17/26 (65.38%), Query Frame = 3 Query: 339 RASIGAGFIYPLVGTMSTMPGLPIRP 416 R S GAGFI L G + TMPGLP P Sbjct: 514 RISAGAGFIVVLTGDIMTMPGLPKVP 539
BLAST of EY679003 vs. ExPASy Swiss-Prot
Match: FTHS_CLOPH (Formate--tetrahydrofolate ligase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=fhs PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 6.122e-20 Identity = 45/102 (44.12%), Postives = 61/102 (59.80%), Query Frame = 2 Query: 35 GGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMA*TQYSFSHDAAEKGAPTGFILPIRDV 337 GG+G +DL V + E LYP ++S+KEK+ TIA+ YGA GV + A K++E T GF LP+CMA QYS S D ++ G PT F + IR+V Sbjct: 412 GGEGGIDLANKVIKTIETKESNYHVLYPNEMSLKEKMGTIAKEIYGADGVTFDSGALKEVERLTELGFGNLPVCMAKNQYSLSDDPSKLGRPTNFTVNIREV 513 HSP 2 Score: 33.113 bits (74), Expect = 6.122e-20 Identity = 14/24 (58.33%), Postives = 17/24 (70.83%), Query Frame = 3 Query: 345 SIGAGFIYPLVGTMSTMPGLPIRP 416 S GAGF+ + GT+ TMPGLP P Sbjct: 516 SAGAGFVVAITGTVMTMPGLPKVP 539 The following BLAST results are available for this feature:
BLAST of EY679003 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 293
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Sequences
The
following sequences are available for this feature:
EST sequence >EY679003 ID=EY679003; Name=EY679003; organism=Citrus sinensis; type=EST; length=876bpback to top |