CV884704

Overview
NameCV884704
Unique NameCV884704
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7852 contig Csv1_Contig7852:253..1098. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP5_ARATH (Serine carboxypeptidase-like 5 OS=Arabidopsis thaliana GN=SCPL5 PE=2 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 1.943e-34
Identity = 66/140 (47.14%), Postives = 89/140 (63.57%), Query Frame = -2
Query:  153 VATLWLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 572
            + T W+ND  VR A+    ESI G W  C   I + HD  S + YH N ++ GYR+LI+SGDHD+ VPF  ++AW RS+ Y I+D WRPW    Q+ GYT+ Y N +TF T++G GHT  EYKP E    + R++ G+PL
Sbjct:  301 LTTYWVNDVNVRKALQINKESI-GEWVRCYFGIPYTHDIKSSVPYHMNNSINGYRSLIYSGDHDLNVPFLATQAWVRSLNYSIIDNWRPWMIKDQIGGYTKTYANKMTFATVRGGGHTA-EYKPYETYIMFHRWINGQPL 438          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP4_ARATH (Serine carboxypeptidase-like 4 OS=Arabidopsis thaliana GN=SCPL4 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.537e-34
Identity = 66/140 (47.14%), Postives = 88/140 (62.86%), Query Frame = -2
Query:  153 VATLWLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 572
            + T W ND  VR A+    ESI G W  C   I + HD  S + YH N ++ GYR+LI+SGDHD+ VPF G++AW RS+ Y I+D WRPW    Q+AGYT  Y N +TF T+ G GHT  E+ P+E    + R++ G+PL
Sbjct:  304 LTTYWANDETVRKALQINKESI-GEWTRCYRGIPYNHDIKSSVPYHMNNSIDGYRSLIYSGDHDIQVPFLGTQAWIRSLNYSIIDDWRPWMIKDQIAGYTTSYVNKMTFATVTGGGHTA-EFTPKETFMMFQRWINGQPL 441          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP1_ARATH (Serine carboxypeptidase-like 1 OS=Arabidopsis thaliana GN=SCPL1 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.537e-34
Identity = 69/140 (49.29%), Postives = 90/140 (64.29%), Query Frame = -2
Query:  153 VATLWLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 572
            + T W NDA VR A+    ESI G W  C   I + +D  S + YH N ++ GYR+LI+SGDHD  VP+ G++AW RS+ Y I+D WRPW    Q+AGYT+ Y N +TF TIKG GHT  E KP EA   + R++ G+PL
Sbjct:  304 LTTYWANDATVREALQINKESI-GEWVRCYYSIPYNNDIKSSMPYHVNNSISGYRSLIYSGDHDFEVPYLGTQAWIRSLNYSIIDDWRPWMVKNQIAGYTRTYANKMTFATIKGGGHTA-ESKPEEASIMFQRWINGQPL 441          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP17_ARATH (Serine carboxypeptidase-like 17 OS=Arabidopsis thaliana GN=SCPL17 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.652e-34
Identity = 67/136 (49.26%), Postives = 86/136 (63.24%), Query Frame = -2
Query:  153 WLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 560
            W N+ +VR A+    E     W  C   I +  D  S + YHK +++ GYR+L+FSGDHDM VPF G++AW RS+ Y IVD WRPW    QVAGYT+ Y N +TF T+KG GHT  EYKP E      R+L+G+PL
Sbjct:  304 WANEKSVRKALLVN-EGTVRKWIRCNTEIAYNKDIRSSVPYHKYISIEGYRSLVFSGDHDMLVPFLGTQAWIRSLNYSIVDDWRPWMVQNQVAGYTRTYANKMTFATVKGGGHT-SEYKPVETYIMIKRWLSGQPL 437          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP18_ARATH (Serine carboxypeptidase-like 18 OS=Arabidopsis thaliana GN=SCPL18 PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 7.382e-34
Identity = 68/141 (48.23%), Postives = 92/141 (65.25%), Query Frame = -2
Query:  153 VATLWLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDAGSMIKYHKNLTLRG-YRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 572
            +A+ W ND  VR  +H    SI G W  C   + +E D  S + YH+N ++ G YR+L++S DHDM VP+ G+EAW +S+ Y I D WRPW  N QV GYT+ Y NN+TF TIKG GHT  EYKP E+   + R+++G+PL
Sbjct:  326 LASHWANDEDVRRELHVVKGSI-GKWMRCNWDLPYEKDIKSSVPYHRNNSIIGDYRSLVYSSDHDMMVPYIGTEAWIKSLNYSITDDWRPWFVNNQVIGYTRTYANNMTFATIKGGGHTA-EYKPEESFMMFQRWISGRPL 464          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP9_ARATH (Serine carboxypeptidase-like 9 OS=Arabidopsis thaliana GN=SCPL9 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 8.162e-33
Identity = 64/136 (47.06%), Postives = 90/136 (66.18%), Query Frame = -2
Query:  153 WLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 560
            W N+ +VR A+H +  SI G W      I ++ D  S I YH N ++ GYR+LIFSGDHD+ +PF  ++AW +S+ Y I+D WRPW   GQ+AGYT+ Y N +TF T+KG GHT  EY P E+   + R+++G+PL
Sbjct:  304 WANNESVREALHVDKGSI-GEWIRDHRGIPYKSDIRSSIPYHMNNSINGYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTA-EYLPEESSIMFQRWISGQPL 437          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP15_ARATH (Serine carboxypeptidase-like 15 OS=Arabidopsis thaliana GN=SCPL15 PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 8.162e-33
Identity = 65/136 (47.79%), Postives = 89/136 (65.44%), Query Frame = -2
Query:  153 WLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 560
            W ++  VR A+     S  G+WE C  R+L   D  S I +H N ++RGYR+L+ SGDHDM +PF G++AW RS+ Y I +KWRPW    QVAGYT+ Y N +T  T+KG GHT+ EYKP E    + R+++G+PL
Sbjct:  303 WADNETVRRALKVVKGS-KGTWERCDYRVLSNQDIKSSIPFHINNSIRGYRSLVISGDHDMTIPFLGTQAWIRSLNYSITEKWRPWMILDQVAGYTKTYANKMTLATVKGGGHTL-EYKPEENSVLFKRWISGQPL 436          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP13_ARATH (Serine carboxypeptidase-like 13 OS=Arabidopsis thaliana GN=SCPL13 PE=2 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 1.392e-32
Identity = 64/139 (46.04%), Postives = 90/139 (64.75%), Query Frame = -2
Query:  153 TLWLNDAAVRTAIHAEPESIAGSWELCTDR-ILFEHDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 566
            T W N+ +VR A+     SI G W  C  + I + +D  S + YH   ++ GYR+LI++GDHDM VPF  ++AW RS+ Y I D W+PW  N Q+AGYT+ Y N +TF TIKG+GHT  EYKP+E    + R+++ +PL
Sbjct:  294 TFWANNKSVREALQVNKGSI-GKWVQCNYKNISYNYDIKSSVAYHMKNSIDGYRSLIYNGDHDMMVPFLATQAWIRSLNYSITDDWKPWMINDQIAGYTRSYSNKMTFATIKGSGHTA-EYKPKETSIMFKRWISAQPL 430          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP11_ARATH (Serine carboxypeptidase-like 11 OS=Arabidopsis thaliana GN=SCPL11 PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 2.375e-32
Identity = 63/139 (45.32%), Postives = 90/139 (64.75%), Query Frame = -2
Query:  153 TLWLNDAAVRTAIHAEPESIAGSWELCTDRIL-FEHDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 566
            + W ND +VR A+H    SI G WE C      +  D  S + YH N ++ GYR+LI+SGDHD+ VPF  ++AW +S+ Y I+D+WRPW    Q+ GYT+ Y N +TF T+KG+GHT  E KP+E+   + R++ G+PL
Sbjct:  297 SFWANDESVRDALHVNKRSI-GKWERCNYLSKPYNKDIKSSVPYHMNNSVSGYRSLIYSGDHDLVVPFLATQAWIKSLNYSIIDEWRPWMIRDQITGYTRTYSNKMTFATVKGSGHTA-ENKPQESFIMFRRWINGQPL 433          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP6_ARATH (Serine carboxypeptidase-like 6 OS=Arabidopsis thaliana GN=SCPL6 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.101e-32
Identity = 66/136 (48.53%), Postives = 85/136 (62.50%), Query Frame = -2
Query:  153 WLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 560
            W+ND  VR A+    ESI   W+ C     +  D  S + YH N ++ GYR+LIFSGDHD  VP  G++ W +S+ Y IVDKWRPW  N QVAGYT+ Y N +TF T+KG GHT  EYKP E    + R++ G+ L
Sbjct:  308 WVNDETVRKALQINKESIR-EWKRCDWSKPYTKDIISSVPYHMNNSINGYRSLIFSGDHDFEVPLIGTQVWIKSLNYAIVDKWRPWMINNQVAGYTRTYANKMTFATVKGGGHTA-EYKPDETFIMFQRWINGQAL 441          
The following BLAST results are available for this feature:
BLAST of CV884704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
SCP5_ARATH1.943e-3447.14Serine carboxypeptidase-like 5 OS=Arabidopsis thal... [more]
SCP4_ARATH2.537e-3447.14Serine carboxypeptidase-like 4 OS=Arabidopsis thal... [more]
SCP1_ARATH2.537e-3449.29Serine carboxypeptidase-like 1 OS=Arabidopsis thal... [more]
SCP17_ARATH5.652e-3449.26Serine carboxypeptidase-like 17 OS=Arabidopsis tha... [more]
SCP18_ARATH7.382e-3448.23Serine carboxypeptidase-like 18 OS=Arabidopsis tha... [more]
SCP9_ARATH8.162e-3347.06Serine carboxypeptidase-like 9 OS=Arabidopsis thal... [more]
SCP15_ARATH8.162e-3347.79Serine carboxypeptidase-like 15 OS=Arabidopsis tha... [more]
SCP13_ARATH1.392e-3246.04Serine carboxypeptidase-like 13 OS=Arabidopsis tha... [more]
SCP11_ARATH2.375e-3245.32Serine carboxypeptidase-like 11 OS=Arabidopsis tha... [more]
SCP6_ARATH3.101e-3248.53Serine carboxypeptidase-like 6 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_010A12_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_010_T7_A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884704 ID=CV884704; Name=CV884704; organism=Citrus sinensis; type=EST; length=846bp
TTGATCATTCTAATCTTAATATAAATTATTGATGTCTCTCATATTCTTTC
AGACACAGATTTTGATGAAGCAAAAGGATGAGTGTAGCAAGACTGCTCTC
TTTCTCAATCAAGCATAATGCACACAAGATCCCAGCTCATAGCACCCTTT
TACAGTGGTTTCCCGGCCAGAAAACGACTGTAAAAATCCAATGCCTCTCG
TGGTTTGTATTCTGGTACTGTATGACCAGCTCCCTTTATGGTTAAAAATG
TGAGGTTGTTTTCATATCCTTGAGTATATCCAGCAACTTGTCCATTGGAA
GTCCAAGGTCTCCATTTATCTACAATCTTATATCCAACCGACCTAGTCCA
TGCTTCACTCCCAGTGAAAGGAACACACATATCATGATCCCCACTGAATA
TGAGTGCCCGATATCCCCTGAGAGTGAGGTTCTTATGGTATTTGATCATG
CTCCCAGCATCATGTTCAAATAAAATCCTGTCTGTACATAATTCCCAACT
TCCAGCAATGCTCTCCGGTTCGGCATGAATTGCTGTCCTAACTGCTGCAT
CATTGAGCCATAGAGTTGCAACTCTATCATCTGTGCATGGCACAGAATTA
CTATTGAGAAGCTGGGGCCAACTTGGAACAATCCCGTCTCTTACAGGAGC
TCTAAGAGGCCAGGCACGACCAAACATCCTTATCCTCACAGGAAGAGGCC
TATCAGTCTCACCCAACTGCCGGAAGCTGGATGGTAACCTAATGTTAGCG
GCTGCAATCTCCCATGTCTCATTGCCATGATAGCACGGCTCTAAAATATC
ATACATGTTTAAACCTGCAATATCCTTCTCAACTTCAGAAAGCTTG
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