CV884704

Overview
NameCV884704
Unique NameCV884704
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7852 contig Csv1_Contig7852:253..1098. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP29_ARATH (Serine carboxypeptidase-like 29 OS=Arabidopsis thaliana GN=SCPL29 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.305e-19
Identity = 50/149 (33.56%), Postives = 82/149 (55.03%), Query Frame = -2
Query:  153 PCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRILFEH---DAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 590
            PCT+    T++ N   V+ A+H  P      W+ C+D ++ EH      S++  +  L   G R  +FSGD D  VP T +     ++  + +  + PW  +GQV G++Q Y   L F+T++GAGH VP ++P++AL  +  F++G PL
Sbjct:  316 PCTEKHT-TVYFNLPEVQKALHVPPGLAPSKWDTCSD-VVSEHWNDSPSSVLNIYHELIAAGLRIWVFSGDADAVVPVTSTRYSIDALNLRPLSAYGPWYLDGQVGGWSQQYAG-LNFVTVRGAGHEVPLHRPKQALALFKAFISGTPL 461          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP25_ARATH (Serine carboxypeptidase-like 25 OS=Arabidopsis thaliana GN=SCPL25 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.305e-19
Identity = 53/150 (35.33%), Postives = 79/150 (52.67%), Query Frame = -2
Query:  147 PCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRIL--FEHDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL*K 590
            PCT+ R A ++ N   V+ A+HA    I   W  C++ +   +     +++  ++ +   G R  +FSGD D  VP T +      +       W PW    QV G+T+ YE  LTF+T++GAGH VP +KPR A + +  FL GKPL K
Sbjct:  325 PCTE-RYAEIYYNRPDVQKALHANTTKIPYKWTACSEVLNRNWNDTDSTVLPIYREMIAGGIRVWVFSGDVDSVVPVTATRYSLARLSLSTKLPWYPWYVKKQVGGWTEVYEG-LTFVTVRGAGHEVPLFKPRAAFELFKYFLRGKPLPK 472          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: CBP2_HORVU (Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CBP2 PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 3.011e-19
Identity = 57/150 (38.00%), Postives = 85/150 (56.67%), Query Frame = -2
Query:  153 PCTDDRVATLWLNDAAVRTAIHAEPESIAG-SWELCTDRILFE-HDAG-SMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQ-VAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 590
            PCT+ R +T + N   V+TA+HA        +W  C+D I    HDA  SM+  ++ L   G R  +FSGD D  VP T +     ++G      W PW  + Q V G++Q Y+  LT ++++GAGH VP ++PR+AL  + +FL GKP+
Sbjct:  319 PCTE-RYSTAYYNRRDVQTALHANVTGAMNYTWTNCSDTINTHWHDAPRSMLPIYRELIAAGLRIWVFSGDTDAVVPLTATRYSIGALGLATTTSWYPWYDDLQEVGGWSQVYKG-LTLVSVRGAGHEVPLHRPRQALILFQQFLQGKPM 466          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP31_ARATH (Serine carboxypeptidase-like 31 OS=Arabidopsis thaliana GN=SCPL31 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.708e-19
Identity = 59/162 (36.42%), Postives = 83/162 (51.23%), Query Frame = -2
Query:  156 IVPSWPQLLNSNSVPCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDAGS---MIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKP 632
            I  S P  L     PC DD  A ++ N A V+ ++HA       +W +C   I F +  GS   ++  ++ L   G R  ++SGD D  VP   +     ++   I   WRPW    QV+G+ Q YE  LTF T +GAGH VP +KP  +L F+S FL+G P
Sbjct:  302 IYTSMPPRLMGGYDPCLDD-YARVFYNRADVQKSLHASDGVNLKNWSICNMEI-FNNWTGSNPSVLPIYEKLIAGGLRIWVYSGDTDGRVPVLATRYSLNALELPIKTAWRPWYHEKQVSGWLQEYEG-LTFATFRGAGHAVPCFKPSSSLAFFSAFLSGVP 460          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: CBP21_HORVU (Serine carboxypeptidase II-1 (Fragment) OS=Hordeum vulgare GN=CXP;2-1 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.708e-19
Identity = 56/155 (36.13%), Postives = 83/155 (53.55%), Query Frame = -2
Query:  135 PCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRILFEH---DAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL*KGAMS 590
            PCT+ + +T + N   V+ A  A    I  SW  C+D +L +H      SM+  ++ L   G R  +FSGD D  VP T +     ++    V  W PW    +VAG+ Q Y+  LT +TI+GAGH VP ++P++AL  +  FL  KP+ + A S
Sbjct:  169 PCTE-QYSTKYYNLPEVQKAFRANVTGIPYSWTACSD-VLSDHWKDSPRSMLPIYRELIAAGIRIWVFSGDADSVVPLTATRYSIDALYLPTVTNWYPWYDEEEVAGWCQVYK-GLTLVTIRGAGHEVPLHRPQQALKLFEHFLQDKPMPRPAHS 320          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: PPGB_HUMAN (Lysosomal protective protein OS=Homo sapiens GN=CTSA PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 4.348e-18
Identity = 77/245 (31.43%), Postives = 122/245 (49.80%), Query Frame = -2
Query:  156 LSEVEKDI--AGLNMYDILEPCYHGNETWEIAAANIRLPSSFRQLGETDRPLPVRIRMFGRAWPLRAPVRDGIVPSWPQ-LLNSNSV-----PCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDA---GSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWT-----SNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKP 842
            L EV + +  +GLN+Y++  PC  G            +PS FR   +T     V ++  G  +  R P++      W Q LL S        PCT+   A+ +LN+  VR A++  PE +   W++C   +  ++         +Y K L+ + Y+ L+++GD DM   F G E +  S+  K+  + RPW      S  Q+AG+ + + +++ FLTIKGAGH VP  KP  A   +SRFL  +P
Sbjct:  260 LQEVARIVGNSGLNIYNLYAPCAGG------------VPSHFRYEKDT-----VVVQDLGNIFT-RLPLKR----MWHQALLRSGDKVRMDPPCTNTTAASTYLNNPYVRKALNI-PEQLP-QWDMCNFLVNLQYRRLYRSMNSQYLKLLSSQKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEF-SHIAFLTIKGAGHMVPTDKPLAAFTMFSRFLNKQP 479          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP35_ARATH (Serine carboxypeptidase-like 35 OS=Arabidopsis thaliana GN=SCPL35 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.678e-18
Identity = 52/147 (35.37%), Postives = 76/147 (51.70%), Query Frame = -2
Query:  153 PCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDAGS-MIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 590
            PCT+   A  + N   V+ A+HA   ++   +  C+  I    DA S MI   + L   G R  I+SGD D  VP T +    + +G K+   WR W    QVAG+ + Y   L F+T++GAGH VP   P ++L  +S F++  PL
Sbjct:  330 PCTES-YAENYFNRKDVQVALHANVTNLPYPYSPCSGVIKRWSDAPSTMIPIIQKLLTGGLRIWIYSGDTDGRVPVTSTRYSIKKMGLKVESPWRSWFHKSQVAGWVETYAGGLNFVTVRGAGHQVPALAPAQSLTLFSHFISSVPL 475          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: PPGB_MOUSE (Lysosomal protective protein OS=Mus musculus GN=Ctsa PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.652e-17
Identity = 57/153 (37.25%), Postives = 86/153 (56.21%), Query Frame = -2
Query:  156 PCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDA---GSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWT-----SNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKP 590
            PCT+    + +LN+  VR A+H  PES+   W++C   +  ++         +Y K L+ + Y+ L+++GD DM   F G E +  S+  K+  + RPW      S  QVAG+ +   +++TFLTIKGAGH VP  KPR A   +SRFL  +P
Sbjct:  324 PCTNTTAPSNYLNNPYVRKALHI-PESLP-RWDMCNFLVNLQYRRLYQSMNSQYLKLLSSQKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVDYGESGEQVAGFVKEC-SHITFLTIKGAGHMVPTDKPRAAFTMFSRFLNKEP 473          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: CBP22_HORVU (Serine carboxypeptidase II-2 (Fragment) OS=Hordeum vulgare GN=CXP;2-2 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.652e-17
Identity = 50/149 (33.56%), Postives = 81/149 (54.36%), Query Frame = -2
Query:  153 PCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRIL--FEHDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPW-TSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 590
            PCT+   + ++ N   V+ A+H  P      WE C++ I   ++    S++  +  L   G R  +FSGD D  +P T +     ++    V  W  W   +G+V G+TQGY+  L F+T++GAGH VP ++P++AL     FLAG+P+
Sbjct:  280 PCTEKH-SIVYFNLHEVQKALHVNPVIGKSKWETCSEVINTNWKDCERSVLHIYHELIQYGLRIWMFSGDTDAVIPVTSTRYSIDALKLPTVTPWHAWYDDDGEVGGWTQGYKG-LNFVTVRGAGHEVPLHRPKQALTLIKSFLAGRPM 426          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP46_ARATH (Serine carboxypeptidase-like 46 OS=Arabidopsis thaliana GN=SCPL46 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.184e-15
Identity = 54/175 (30.86%), Postives = 83/175 (47.43%), Query Frame = -2
Query:  153 IVPSWPQLLNSNSVPCTDDRVATLWLNDAAVRTAIHAEPESIAGS--WELCTDRILFE---------HDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTR----SVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 632
            +V   PQ +      C +D     +LN   V+ A+HA    + G+  W +C+D + +E         +  GS++K        G    ++SGD D  +P TGS    +     +G +    +R W +  QV G+TQ Y N L F T++GA H VP  +P  AL  +  FL G+PL
Sbjct:  298 VVSPQPQQVGETVDVCLEDETVN-YLNRRDVQKALHAR---LVGTRKWTVCSDVLDYEVLDVEVPTINIVGSLVK-------AGVPVFVYSGDQDSVIPLTGSRTLVKRLAEELGLRTTVPYRVWFAGQQVGGWTQVYGNTLAFATVRGAAHEVPFSQPARALVLFKAFLGGRPL 461          
The following BLAST results are available for this feature:
BLAST of CV884704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
SCP29_ARATH2.305e-1933.56Serine carboxypeptidase-like 29 OS=Arabidopsis tha... [more]
SCP25_ARATH2.305e-1935.33Serine carboxypeptidase-like 25 OS=Arabidopsis tha... [more]
CBP2_HORVU3.011e-1938.00Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CB... [more]
SCP31_ARATH6.708e-1936.42Serine carboxypeptidase-like 31 OS=Arabidopsis tha... [more]
CBP21_HORVU6.708e-1936.13Serine carboxypeptidase II-1 (Fragment) OS=Hordeum... [more]
PPGB_HUMAN4.348e-1831.43Lysosomal protective protein OS=Homo sapiens GN=CT... [more]
SCP35_ARATH5.678e-1835.37Serine carboxypeptidase-like 35 OS=Arabidopsis tha... [more]
PPGB_MOUSE1.652e-1737.25Lysosomal protective protein OS=Mus musculus GN=Ct... [more]
CBP22_HORVU1.652e-1733.56Serine carboxypeptidase II-2 (Fragment) OS=Hordeum... [more]
SCP46_ARATH1.184e-1530.86Serine carboxypeptidase-like 46 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_010A12_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_010_T7_A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884704 ID=CV884704; Name=CV884704; organism=Citrus sinensis; type=EST; length=846bp
TTGATCATTCTAATCTTAATATAAATTATTGATGTCTCTCATATTCTTTC
AGACACAGATTTTGATGAAGCAAAAGGATGAGTGTAGCAAGACTGCTCTC
TTTCTCAATCAAGCATAATGCACACAAGATCCCAGCTCATAGCACCCTTT
TACAGTGGTTTCCCGGCCAGAAAACGACTGTAAAAATCCAATGCCTCTCG
TGGTTTGTATTCTGGTACTGTATGACCAGCTCCCTTTATGGTTAAAAATG
TGAGGTTGTTTTCATATCCTTGAGTATATCCAGCAACTTGTCCATTGGAA
GTCCAAGGTCTCCATTTATCTACAATCTTATATCCAACCGACCTAGTCCA
TGCTTCACTCCCAGTGAAAGGAACACACATATCATGATCCCCACTGAATA
TGAGTGCCCGATATCCCCTGAGAGTGAGGTTCTTATGGTATTTGATCATG
CTCCCAGCATCATGTTCAAATAAAATCCTGTCTGTACATAATTCCCAACT
TCCAGCAATGCTCTCCGGTTCGGCATGAATTGCTGTCCTAACTGCTGCAT
CATTGAGCCATAGAGTTGCAACTCTATCATCTGTGCATGGCACAGAATTA
CTATTGAGAAGCTGGGGCCAACTTGGAACAATCCCGTCTCTTACAGGAGC
TCTAAGAGGCCAGGCACGACCAAACATCCTTATCCTCACAGGAAGAGGCC
TATCAGTCTCACCCAACTGCCGGAAGCTGGATGGTAACCTAATGTTAGCG
GCTGCAATCTCCCATGTCTCATTGCCATGATAGCACGGCTCTAAAATATC
ATACATGTTTAAACCTGCAATATCCTTCTCAACTTCAGAAAGCTTG
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