CV884662

Overview
NameCV884662
Unique NameCV884662
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length619
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_STAAC (Probable manganese transport protein mntH OS=Staphylococcus aureus (strain COL) GN=mntH PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.297e-18
Identity = 42/105 (40.00%), Postives = 69/105 (65.71%), Query Frame = 2 
Query:  305 KKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAIAI 619
            +K   F GPG L+++ ++DPGN    +Q GA  GY+LL++++ ++L  +L+Q ++ R+G+ATG  LA++ R         + W +AE+A+I  D  EVIGSAIA+
Sbjct:   31 QKFLSFLGPGLLVAVGYMDPGNWITSMQGGAQYGYTLLFVILISSLSAMLLQSMTVRLGIATGMDLAQMTRHYLSRPIAIIFWIIAELAIIATDIAEVIGSAIAL 135
[Close]
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_STAAB (Probable manganese transport protein mntH OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=mntH PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.297e-18
Identity = 42/105 (40.00%), Postives = 69/105 (65.71%), Query Frame = 2 
Query:  305 KKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAIAI 619
            +K   F GPG L+++ ++DPGN    +Q GA  GY+LL++++ ++L  +L+Q ++ R+G+ATG  LA++ R         + W +AE+A+I  D  EVIGSAIA+
Sbjct:   31 QKFLSFLGPGLLVAVGYMDPGNWITSMQGGAQYGYTLLFVILISSLSAMLLQSMTVRLGIATGMDLAQMTRHYLSRPIAIIFWIIAELAIIATDIAEVIGSAIAL 135
[Close]
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_STAA9 (Probable manganese transport protein mntH OS=Staphylococcus aureus (strain JH9) GN=mntH PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.297e-18
Identity = 42/105 (40.00%), Postives = 69/105 (65.71%), Query Frame = 2 
Query:  305 KKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAIAI 619
            +K   F GPG L+++ ++DPGN    +Q GA  GY+LL++++ ++L  +L+Q ++ R+G+ATG  LA++ R         + W +AE+A+I  D  EVIGSAIA+
Sbjct:   31 QKFLSFLGPGLLVAVGYMDPGNWITSMQGGAQYGYTLLFVILISSLSAMLLQSMTVRLGIATGMDLAQMTRHYLSRPIAIIFWIIAELAIIATDIAEVIGSAIAL 135
[Close]
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_STAA8 (Probable manganese transport protein mntH OS=Staphylococcus aureus (strain NCTC 8325) GN=mntH PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.297e-18
Identity = 42/105 (40.00%), Postives = 69/105 (65.71%), Query Frame = 2 
Query:  305 KKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAIAI 619
            +K   F GPG L+++ ++DPGN    +Q GA  GY+LL++++ ++L  +L+Q ++ R+G+ATG  LA++ R         + W +AE+A+I  D  EVIGSAIA+
Sbjct:   31 QKFLSFLGPGLLVAVGYMDPGNWITSMQGGAQYGYTLLFVILISSLSAMLLQSMTVRLGIATGMDLAQMTRHYLSRPIAIIFWIIAELAIIATDIAEVIGSAIAL 135
[Close]
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_STAA3 (Probable manganese transport protein mntH OS=Staphylococcus aureus (strain USA300) GN=mntH PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.297e-18
Identity = 42/105 (40.00%), Postives = 69/105 (65.71%), Query Frame = 2 
Query:  305 KKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAIAI 619
            +K   F GPG L+++ ++DPGN    +Q GA  GY+LL++++ ++L  +L+Q ++ R+G+ATG  LA++ R         + W +AE+A+I  D  EVIGSAIA+
Sbjct:   31 QKFLSFLGPGLLVAVGYMDPGNWITSMQGGAQYGYTLLFVILISSLSAMLLQSMTVRLGIATGMDLAQMTRHYLSRPIAIIFWIIAELAIIATDIAEVIGSAIAL 135
[Close]
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_STAA2 (Probable manganese transport protein mntH OS=Staphylococcus aureus (strain JH1) GN=mntH PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.297e-18
Identity = 42/105 (40.00%), Postives = 69/105 (65.71%), Query Frame = 2 
Query:  305 KKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAIAI 619
            +K   F GPG L+++ ++DPGN    +Q GA  GY+LL++++ ++L  +L+Q ++ R+G+ATG  LA++ R         + W +AE+A+I  D  EVIGSAIA+
Sbjct:   31 QKFLSFLGPGLLVAVGYMDPGNWITSMQGGAQYGYTLLFVILISSLSAMLLQSMTVRLGIATGMDLAQMTRHYLSRPIAIIFWIIAELAIIATDIAEVIGSAIAL 135
[Close]
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_STAA1 (Probable manganese transport protein mntH OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=mntH PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.297e-18
Identity = 42/105 (40.00%), Postives = 69/105 (65.71%), Query Frame = 2 
Query:  305 KKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAIAI 619
            +K   F GPG L+++ ++DPGN    +Q GA  GY+LL++++ ++L  +L+Q ++ R+G+ATG  LA++ R         + W +AE+A+I  D  EVIGSAIA+
Sbjct:   31 QKFLSFLGPGLLVAVGYMDPGNWITSMQGGAQYGYTLLFVILISSLSAMLLQSMTVRLGIATGMDLAQMTRHYLSRPIAIIFWIIAELAIIATDIAEVIGSAIAL 135
[Close]
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_STAES (Probable manganese transport protein mntH OS=Staphylococcus epidermidis (strain ATCC 12228) GN=mntH PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.611e-18
Identity = 42/105 (40.00%), Postives = 69/105 (65.71%), Query Frame = 2 
Query:  305 KKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAIAI 619
            +K   F GPG L+++ ++DPGN    +Q GA  GY+LL++++ ++L  +L+Q ++ R+G+ATG  LA++ R         + W +AE+A+I  D  EVIGSAIA+
Sbjct:   36 QKFLAFLGPGLLVAVGYMDPGNWITSMQGGAQYGYTLLFIILISSLSAMLLQSMTVRLGIATGMDLAQMTRHFLNKPVAIMFWIIAELAIIATDIAEVIGSAIAL 140
[Close]
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_STAEQ (Probable manganese transport protein mntH OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=mntH PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.611e-18
Identity = 42/105 (40.00%), Postives = 69/105 (65.71%), Query Frame = 2 
Query:  305 KKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAIAI 619
            +K   F GPG L+++ ++DPGN    +Q GA  GY+LL++++ ++L  +L+Q ++ R+G+ATG  LA++ R         + W +AE+A+I  D  EVIGSAIA+
Sbjct:   36 QKFLAFLGPGLLVAVGYMDPGNWITSMQGGAQYGYTLLFIILISSLSAMLLQSMTVRLGIATGMDLAQMTRHFLNKPVAIMFWIIAELAIIATDIAEVIGSAIAL 140
[Close]
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_STAHJ (Probable manganese transport protein mntH OS=Staphylococcus haemolyticus (strain JCSC1435) GN=mntH PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.250e-17
Identity = 41/105 (39.05%), Postives = 69/105 (65.71%), Query Frame = 2 
Query:  305 KKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAIAI 619
            +K   F GPG L+++ ++DPGN    +Q GA  GY+LL++++ ++L  +L+Q ++ R+G+AT + LA++ R         + W +AE+A+I  D  EVIGSAIA+
Sbjct:   29 QKFLAFLGPGLLVAVGYMDPGNWITSMQGGAQFGYTLLFVILISSLSAMLLQSMTVRLGIATDKDLAQMTRHYLNKPTAIIFWVIAELAIIATDIAEVIGSAIAL 133
The following BLAST results are available for this feature:
BLAST of CV884662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
MNTH_STAAC4.297e-1840.00Probable manganese transport protein mntH OS=Staph... [more]
MNTH_STAAB4.297e-1840.00Probable manganese transport protein mntH OS=Staph... [more]
MNTH_STAA94.297e-1840.00Probable manganese transport protein mntH OS=Staph... [more]
MNTH_STAA84.297e-1840.00Probable manganese transport protein mntH OS=Staph... [more]
MNTH_STAA34.297e-1840.00Probable manganese transport protein mntH OS=Staph... [more]
MNTH_STAA24.297e-1840.00Probable manganese transport protein mntH OS=Staph... [more]
MNTH_STAA14.297e-1840.00Probable manganese transport protein mntH OS=Staph... [more]
MNTH_STAES5.611e-1840.00Probable manganese transport protein mntH OS=Staph... [more]
MNTH_STAEQ5.611e-1840.00Probable manganese transport protein mntH OS=Staph... [more]
MNTH_STAHJ1.250e-1739.05Probable manganese transport protein mntH OS=Staph... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008G10_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T3_G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884662 ID=CV884662; Name=CV884662; organism=Citrus sinensis; type=EST; length=619bp
GACCGTTTTCACCAGTCCTCAGAGGTGAGATCTGTGGAACAGAATCTACT
GCCGAGTTTGGAATATTCCGTGCGTAGATAAAACAAAGAAAGTGAAAATG
GACTCCTCCGAAACCCGAGAAGAAGAAAGCGGGTCCAAAGACAGCAATGA
AACCAACCGCCTCCTTCCAATACCGTCACCACCGTCCTCAACGGAGGACG
ACGAGGAAGTCGCGTTCGATTCACGAGAGAAAATCTTGATCGTCGACGCA
GATTCAGCCTCCACGTTGAACGTTGACGGTGACCAAGTGCCGCCTTTTTC
GTGGAAAAAGCTTTGGTTATTCACTGGACCCGGTTTCTTAATGAGCATAG
CGTTTCTGGATCCGGGGAATCTGGAGGGGGATCTCCAATCGGGGGCGATA
GCAGGGTACTCGCTTCTTTGGTTGCTAATGTGGGCCACCCTCATGGGCTT
GCTTATTCAGCTGCTGTCGGCACGAGTAGGGGTGGCCACGGGGCGTCACT
TGGCAGAGCTGTGTAGAGAGGAGTACCCCAATTGGGCGCGATTCGTGTTG
TGGTTCATGGCTGAAGTGGCCTTGATTGGTGCCGATTTTCAGGAAGTAAT
TGGGAGTGCCATTGCTATC
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