CV884662
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: NRAM6_ARATH (Metal transporter Nramp6 OS=Arabidopsis thaliana GN=NRAMP6 PE=2 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 5.981e-28 Identity = 57/107 (53.27%), Postives = 77/107 (71.96%), Query Frame = 2 Query: 299 SWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAIAI 619 SWK + + GPGFL+SIA++DPGN E DLQSGA Y LLW+++ A+ L+IQ L+A +GV TG+HLAE CR EY F+LW +AE+A++ D EVIG+A A+ Sbjct: 34 SWKNFFSYLGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALVIQSLAANLGVVTGKHLAEHCRAEYSKVPNFMLWVVAEIAVVACDIPEVIGTAFAL 140
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: NRAM1_ARATH (Metal transporter Nramp1 OS=Arabidopsis thaliana GN=NRAMP1 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 7.812e-28 Identity = 56/107 (52.34%), Postives = 77/107 (71.96%), Query Frame = 2 Query: 299 SWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAIAI 619 SWK + + GPGFL+SIA++DPGN E DLQ+GA Y LLW+++ A+ L+IQ L+A +GV TG+HLAE CR EY F+LW +AE+A++ D EVIG+A A+ Sbjct: 42 SWKNFFAYLGPGFLVSIAYIDPGNFETDLQAGAHYKYELLWIILVASCAALVIQSLAANLGVVTGKHLAEQCRAEYSKVPNFMLWVVAEIAVVACDIPEVIGTAFAL 148
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_RHILO (Probable manganese transport protein mntH OS=Rhizobium loti GN=mntH PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.127e-25 Identity = 52/106 (49.06%), Postives = 77/106 (72.64%), Query Frame = 2 Query: 302 WKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAIAI 619 +++L+ F GPG+++S+ ++DPGN DL GA GY+LL+++M + LM +L+Q L+AR+G+ATGR LA+ CR YP FVLW E+A+I D EVIG+AIA+ Sbjct: 42 FRRLFAFMGPGYMVSVGYMDPGNWATDLAGGAQFGYTLLFVIMLSNLMAILLQALAARLGIATGRDLAQACRAYYPRPVNFVLWIACELAIIACDLAEVIGTAIAL 147
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_PECCP (Probable manganese transport protein mntH OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=mntH PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.291e-22 Identity = 47/96 (48.96%), Postives = 69/96 (71.88%), Query Frame = 2 Query: 326 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAI 613 GP F+ +I ++DPGN ++QSGA GY+LLW+++WA LM +LIQLLSA++G+ATG++LAE R+ +P A + W AE+ + D E IG+AI Sbjct: 23 GPAFIAAIGYIDPGNFATNIQSGAAYGYTLLWVVVWANLMAMLIQLLSAKLGIATGKNLAEHIRDRFPRPAVWAYWVQAEIIAMATDLAEFIGAAI 118
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_BRAJA (Probable manganese transport protein mntH OS=Bradyrhizobium japonicum GN=mntH PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.291e-22 Identity = 48/106 (45.28%), Postives = 71/106 (66.98%), Query Frame = 2 Query: 302 WKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAIAI 619 W++L F GPG+L+S+ ++DPGN DL G+ GY+LL +++ + LM +L+Q L+AR+G+ T R LA+ CR Y F+LW E A+I D EVIG+AIA+ Sbjct: 41 WRRLLAFVGPGYLVSVGYMDPGNWATDLAGGSKFGYTLLSVILLSNLMAILLQSLAARLGIVTDRDLAQACRATYSPAVNFLLWLACEAAIIACDLAEVIGTAIAL 146
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_XANAC (Probable manganese transport protein mntH OS=Xanthomonas axonopodis pv. citri GN=mntH PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.686e-22 Identity = 48/106 (45.28%), Postives = 71/106 (66.98%), Query Frame = 2 Query: 302 WKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAIAI 619 W +L F GPG+++S+ ++DPGN DL G+ GY LL +++ + LM +++Q LSAR+G+ATG LA+ CR YP LW + E+A+I D EVIG+AIA+ Sbjct: 35 WSRLLAFLGPGYMVSVGYMDPGNWATDLAGGSQFGYLLLSVILLSNLMAIVLQGLSARLGIATGLDLAQACRARYPRGVNLALWGICELAIIACDLAEVIGTAIAL 140
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_ACICJ (Probable manganese transport protein mntH OS=Acidiphilium cryptum (strain JF-5) GN=mntH PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.875e-22 Identity = 47/106 (44.34%), Postives = 71/106 (66.98%), Query Frame = 2 Query: 302 WKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAIAI 619 W+ +F GP + SIA++DPGN ++Q+GA GY LLW+++ A+L+ +L Q LSAR+G+ TGR+LAELCR+ P +W ++E+A + D E +G AI I Sbjct: 28 WRNPLIFAGPAVVASIAYMDPGNFATNIQAGARYGYDLLWVVLLASLIAMLFQGLSARLGIVTGRNLAELCRDTLPPALTIPMWIISEIAAMATDLAEFLGGAIGI 133
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_XANCP (Probable manganese transport protein mntH OS=Xanthomonas campestris pv. campestris GN=mntH PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.755e-22 Identity = 48/106 (45.28%), Postives = 71/106 (66.98%), Query Frame = 2 Query: 302 WKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAIAI 619 W +L F GPG+++S+ ++DPGN DL G+ GY LL +++ + LM +++Q LSAR+G+ATG LA+ CR YP LW + E+A+I D EVIG+AIA+ Sbjct: 35 WFRLLAFLGPGYMVSVGYMDPGNWATDLAGGSQFGYLLLSVILLSNLMAIVLQGLSARLGIATGLDLAQACRARYPRGINLALWGLCELAIIACDLAEVIGTAIAL 140
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_ANASP (Probable manganese transport protein mntH OS=Anabaena sp. (strain PCC 7120) GN=mntH PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.755e-22 Identity = 45/106 (42.45%), Postives = 72/106 (67.92%), Query Frame = 2 Query: 302 WKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAIAI 619 W+K+ + GPG+L+S+ ++DPGN D+ G+ GY+LL +++ + LM +L+Q L R+GVATGR LA+ CR+ + F LW + E+A+ D E++GSAIA+ Sbjct: 26 WRKMLAYAGPGYLVSVGYIDPGNWATDIAGGSKFGYTLLTVILLSNLMAILLQSLCVRLGVATGRDLAQACRDYFSPKVSFCLWVLCEIAIAACDLAELLGSAIAL 131
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MNTH_YERPY (Probable manganese transport protein mntH OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=mntH PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 4.905e-22 Identity = 44/96 (45.83%), Postives = 70/96 (72.92%), Query Frame = 2 Query: 326 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAI 613 GP F+ +IA++DPGN ++Q+GA GY+LLW+++WA +M +L+QLLSA++G+ATG++LAE R+ +P + W AE+ ++ D E IG+AI Sbjct: 23 GPAFIAAIAYIDPGNFATNIQAGATFGYTLLWVVVWANVMAMLVQLLSAKLGIATGKNLAEHIRDRFPRPVVWAYWVQAEIIVMATDLAEFIGAAI 118 The following BLAST results are available for this feature:
BLAST of CV884662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 139
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884662 ID=CV884662; Name=CV884662; organism=Citrus sinensis; type=EST; length=619bpback to top |