CV884651
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884651 vs. ExPASy Swiss-Prot
Match: EFTU_AQUAE (Elongation factor Tu OS=Aquifex aeolicus GN=tufA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.832e-17 Identity = 66/218 (30.28%), Postives = 110/218 (50.46%), Query Frame = -3 Query: 206 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 847 LL+A+D I P+R DKP +P++DV+ I G GTV GRVE GVL+PG +V L T S+EM + L EALPGDN+G ++ V D++RG V + A + F +QV +++ + G + P + + +++ + +L + + + GD +++ P+ +E RFA+R+ +TV GV+ + Sbjct: 201 LLNAMDEYIPTPQREVDKPFLMPIEDVFSISGRGTVVTGRVERGVLRPGDEVEIVGLREEPLKTVATSIEMFRKVLDEALPGDNIGVLLRGVGKDDVERGQVLAQPGSVKAHK--RFRAQVYVLSK--EEGGRHTPFFVNYRPQFYFRTADVTGTV-----VKLPEGVEMVMPGDNVELEVELIAPVALEEGL------RFAIREGGRTVGAGVVTKI 403
BLAST of CV884651 vs. ExPASy Swiss-Prot
Match: EFTU_AQUPY (Elongation factor Tu OS=Aquifex pyrophilus GN=tuf PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.393e-17 Identity = 66/218 (30.28%), Postives = 109/218 (50.00%), Query Frame = -3 Query: 206 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 847 LL+A+D I P+R DKP +P++DV+ I G GTV GRVE GVL+PG +V L T S+EM + L EALPGDN+G ++ V D++RG V + A F +QV +++ + G + P + + +++ + +L + + + GD +++ P+ +E RFA+R+ +TV GV+ + Sbjct: 201 LLNAMDEYIPTPEREVDKPFLMPIEDVFSISGRGTVVTGRVERGVLRPGDEVEIVGLREEPLKTVATSIEMFRKVLDEALPGDNIGVLLRGVGKDDVERGQVLAQPGSVKAHR--KFRAQVYVLSK--EEGGRHTPFFVNYRPQFYFRTADVTGTV-----VKLPEGVEMVMPGDNVELEVELIAPVALEEGL------RFAIREGGRTVGAGVVTKI 403
BLAST of CV884651 vs. ExPASy Swiss-Prot
Match: EFTU_PROWI (Elongation factor Tu, plastid OS=Prototheca wickerhamii GN=tufA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.126e-17 Identity = 69/225 (30.67%), Postives = 111/225 (49.33%), Query Frame = -3 Query: 200 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMN-----HPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 847 L+D +D+ I PKR +KP + ++DV+ I G GTV GRVE GV+K G +V G + +TT V +EM + L E++ GDNVG ++ + +++RG V + K NF +QV ++N +GY P T+ + K T +G+ + K + GD +K +P+ +E RFA+R+ +TV GV+ + K Sbjct: 202 LMDIVDSYIPTPKRNIEKPFLMAIEDVFSITGRGTVATGRVERGVVKIGDSVEIVGLGATKITT-VTGLEMFQKTLDESIAGDNVGILLRGIQKTEIQRGMVLAKPKS--ITPHTNFEAQVYVLNKEEGGRDTPFFSGYRPQFYVRTTDVTGKIESFCTD----AGEPI----KMVLPGDRIKMKAELIQPIAIERNM------RFAIREGGKTVGAGVVGKILK 409
BLAST of CV884651 vs. ExPASy Swiss-Prot
Match: EFTU_CAMHC (Elongation factor Tu OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=tuf PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 9.094e-17 Identity = 66/218 (30.28%), Postives = 108/218 (49.54%), Query Frame = -3 Query: 206 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 847 L+DA+D+ I PKR +DK +P++D++ I G GTV GRVE G++K G +V P+ TT V VEM + L E GDNVG ++ A +D++RG V + K F ++V I+ + G + P + + V+ +++ I G E+ + GD + + P+ +E + RFA+R+ TV GV+ + Sbjct: 197 LMDAVDSYIPTPKRDTDKDFLMPIEDIFSISGRGTVVTGRVEKGIVKVGDTVELVGIKPT-QTTTVTGVEMFRKELDEGEAGDNVGVLLRGTAKEDVERGMVLAKPKS--ITPHTKFEAEVYILTK--EEGGRHTPFFNNYRPQFYVRTTDVTGSIQLPEGTEM------VMPGDNVKITVELIHPIALEQGT------RFAIREGGHTVGSGVVSKI 397
BLAST of CV884651 vs. ExPASy Swiss-Prot
Match: EFTU_SPHWW (Elongation factor Tu OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=tuf PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.551e-16 Identity = 65/219 (29.68%), Postives = 114/219 (52.05%), Query Frame = -3 Query: 200 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT--TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 847 L+ A+D+ I +P+RP DKP +P++DV+ I G GTV GRVETG++K G V T T V VEM + L + GDN+G ++ V ++++RG V +K + +F+S+V +++ + G + P + + +++ ++ G E+ +K G VK+I P+ +E RF++R+ +TV GV+ ++ K Sbjct: 194 LMAAVDSYIPQPERPLDKPFLMPIEDVFSISGRGTVVTGRVETGMVKVGEEVEIVGIKDTRKTTVTGVEMFRKLLDQGQAGDNIGALIRGVGREEVERGQVL--AKPGSIKPHTDFSSEVYVLSK--EEGGRHTPFFANYRPQFYFRTTDVTGTVELPEGTEMVMPGDNVKLG----VKLI--APIAMEEGL------RFSIREGGRTVGAGVVSSISK 396
BLAST of CV884651 vs. ExPASy Swiss-Prot
Match: EFTU_ANATD (Elongation factor Tu OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=tuf PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.026e-16 Identity = 64/218 (29.36%), Postives = 105/218 (48.17%), Query Frame = -3 Query: 206 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 847 L+DA+D I P+R DKP +P++DV+ I G GTV GRVE G LK G +V F P T V +EM + L EA+ GDNVG ++ + +++RG V +K + F +QV ++ + G + P + + + +++ I G E+ GD + + P+ +E+ RFA+R+ +TV G + + Sbjct: 197 LMDAVDKYIPTPQRDIDKPFLMPIEDVFSITGRGTVVTGRVERGTLKTGEEVEIVGFAPEPRKTVVTGIEMFRKVLDEAVAGDNVGCLLRGIQKNEVERGQVL--AKPGTIKPHTKFKAQVYVLTK--EEGGRHTPFFNGYRPQFYFRTTDVTGTITLPEGVEM------CMPGDNVEMTVELISPIAIESGL------RFAIREGGRTVGAGSVTTI 398
BLAST of CV884651 vs. ExPASy Swiss-Prot
Match: HBS1_SCHPO (Elongation factor 1 alpha-like protein OS=Schizosaccharomyces pombe GN=hbs1 PE=2 SV=4) HSP 1 Score: 86.2705 bits (212), Expect = 2.646e-16 Identity = 67/233 (28.76%), Postives = 113/233 (48.50%), Query Frame = -3 Query: 206 NMIERSTN--LDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQE-ALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 895 N+I++ ++ WYKGPTLL ALD + P++P KPLRL + DVY+ TV GRVE G ++ V+ S VK+V + + A+ GD V + ++ V L+ G + SN ++P R +F +++ + G I +G VL H S + ++ + + + + L + + P+ + + P LGRF +R TVA G++K + Sbjct: 369 NLIQKDSSDLYKWYKGPTLLSALDQLVPPEKPYRKPLRLSIDDVYRSPRSVTV-TGRVEAGNVQVNQVLYDVSSQEDAYVKNVIRNSDPSSTWAVAGDTVTLQLADIEVNQLRPGDILSN-YENPVRRVRSFVAEIQTFDIHGPILSGSTLVL--HLGRTVTSVSLKIVTVNNKRSRHIASRKRAL----VRISFLDGLFPLCLA--EECPALGRFILRRSGDTVAAGIVKEL 591
BLAST of CV884651 vs. ExPASy Swiss-Prot
Match: EFTU_THIDA (Elongation factor Tu OS=Thiobacillus denitrificans (strain ATCC 25259) GN=tuf1 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.646e-16 Identity = 63/221 (28.51%), Postives = 113/221 (51.13%), Query Frame = -3 Query: 200 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 847 L +ALD I EP+R DKP +P++DV+ I G GTV GRVE GV+K G + G+T VK+ VEM + L + GDNVG ++ ++++RG V +K + F++++ +++ G + P + + + +++ I+ +G E+ + GD +K+ +P+ ++ RFA+R+ +TV GV+ +E+ Sbjct: 194 LAEALDTYIPEPERAIDKPFLMPVEDVFSISGRGTVVTGRVERGVIKVGEEIEI--VGITPTVKTTCTGVEMFRKLLDQGQAGDNVGVLLRGTKREEVQRGQVL--AKPGSIKPHTKFSAEIYVLSK--DEGGRHTPFFNGYRPQFYFRTTDVTGSIELPAGTEM------VMPGDNVSIKVSLIQPIAMDEGL------RFAIREGGRTVGAGVVAKIEE 396
BLAST of CV884651 vs. ExPASy Swiss-Prot
Match: EFTU_NEPOL (Elongation factor Tu, chloroplastic OS=Nephroselmis olivacea GN=tufA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.646e-16 Identity = 69/223 (30.94%), Postives = 109/223 (48.88%), Query Frame = -3 Query: 206 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLG-----RFAVRDMRQTVAVGVIKNV 847 L+DA+D I PKR +DK + ++DV+ I G GTV GRVE G +K G +V P+ TT V +EM + L +++ GDNVG ++ + +D++RG V + + F SQV ++ + G + P + V+ +++ KID + G+A MV MVVE P+ RFA+R+ +TV GV+ N+ Sbjct: 203 LMDAVDQYIPTPKRDTDKSFLMAVEDVFSITGRGTVATGRVERGSVKLGDTIEIVGLKPTRETT-VTGLEMFQKTLDQSVAGDNVGILLRGIQKEDIQRGMVLAAPR--TITPHTKFESQVYVLTK--EEGGRHTPFFPGYRPQFYVRTTDVTGKIDSFRADD---------GGEATMVMPGDRVKMVVELIQ---PIAIEKGMRFAIREGGRTVGAGVVSNI 408
BLAST of CV884651 vs. ExPASy Swiss-Prot
Match: EFTU_BLOFL (Elongation factor Tu OS=Blochmannia floridanus GN=tuf PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.646e-16 Identity = 70/219 (31.96%), Postives = 107/219 (48.86%), Query Frame = -3 Query: 206 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 847 L LDN I EPKR DKP LP++DV+ I G GTV GRVE+G++K G V G+ VK+ +EM + L E G+NVG ++ +++RG V SK + +NF S+V I+N G + P + + +++ I EL KE + + GD + + P+ ++ RFA+R+ +TV GV+ V Sbjct: 192 LSSILDNYIPEPKRSIDKPFLLPIEDVFSISGRGTVVTGRVESGIIKVGEEVEI--VGIKDTVKTTCTGIEMFRKLLDEGRAGENVGVLLRGTKRDEVERGQVL--SKPGCIKPHSNFESEVYILNK--DEGGRHTPFFKGYRPQFYFRTTDVTGTI------ELPKEVEMVMPGDNIKMVVHLISPIAMDDGL------RFAIREGGRTVGAGVVSRV 392 The following BLAST results are available for this feature:
BLAST of CV884651 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884651 ID=CV884651; Name=CV884651; organism=Citrus sinensis; type=EST; length=900bpback to top |