CV884651
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884651 vs. ExPASy Swiss-Prot
Match: EFTU_AZOPC (Elongation factor Tu OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=tuf PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.096e-13 Identity = 60/218 (27.52%), Postives = 104/218 (47.71%), Query Frame = -3 Query: 206 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 847 L+DA+DN I P+R DK +P++DV+ I G GTV GR+ETG+++ G ++ +G + V VEM + L E GDNVG ++ V ++KRG V ++ + + ++V I+ + G + P + + V+ ++ +I G E+ + GD + + P+ RFA+R+ +TV G I + Sbjct: 192 LMDAIDNWIPLPQRDIDKSFLMPVEDVFSITGRGTVATGRIETGLVRTGDEVQIIGLDANGKKSVVTGVEMFRKILDEGQAGDNVGLLLRGVDKDEVKRGMVITH--PNKVKPHTKVKAEVYILKK--EEGGRHTPFHNKYRPQFYVRTLDVTGEITLPEGTEM------VMPGDNVTITIELIYPVACNEGL------RFAIREGGRTVGAGQITEI 393
BLAST of CV884651 vs. ExPASy Swiss-Prot
Match: EFTUB_NICSY (Elongation factor TuB, chloroplastic OS=Nicotiana sylvestris GN=TUFB PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.096e-13 Identity = 62/218 (28.44%), Postives = 105/218 (48.17%), Query Frame = -3 Query: 206 LDNINE----PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 835 +DN++E P+R ++ P + ++DV+ I G GTV GRVE G +K G +V GL T V VEM + L EA+ GDNVG ++ + D++RG V +K F + V ++ + G ++P + ++ +++ K+ + E E K + GD + + P+ E RFA+R+ +TV GVI+ + Sbjct: 279 MDNVDEYIPIPQRQTELPFLMAIEDVFSITGRGTVATGRVERGTVKVGEIVDI--VGLKDTRNTTVTGVEMFQKILDEAMAGDNVGLLLRGIQKIDIQRGMVL--AKPGTITPHTKFEALVYVLKK--EEGGRHSPFFAGYRPQFYMRTTDVTGKVTVIMSDKGE-ESKMVMPGDRVNMVVELIMPVACEQGM------RFAIREGGKTVGAGVIQKI 483
BLAST of CV884651 vs. ExPASy Swiss-Prot
Match: EFTU2_SHISS (Elongation factor Tu 2 OS=Shigella sonnei (strain Ss046) GN=tuf2 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.096e-13 Identity = 64/213 (30.05%), Postives = 103/213 (48.36%), Query Frame = -3 Query: 206 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 826 I EP+R DKP LP++DV+ I G GTV GRVE G++K G V G+ KS VEM + L E G+NVG ++ + ++++RG V +K + F S+V I++ G + P + + +++ I+ G E+ + GD +KM+ T P+ ++ RFA+R+ +TV GV+ V Sbjct: 200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NIKMVVTLIHPIAMDDGL------RFAIREGGRTVGAGVVAKV 392
BLAST of CV884651 vs. ExPASy Swiss-Prot
Match: EFTU2_SHIF8 (Elongation factor Tu 2 OS=Shigella flexneri serotype 5b (strain 8401) GN=tuf2 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.096e-13 Identity = 64/213 (30.05%), Postives = 103/213 (48.36%), Query Frame = -3 Query: 206 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 826 I EP+R DKP LP++DV+ I G GTV GRVE G++K G V G+ KS VEM + L E G+NVG ++ + ++++RG V +K + F S+V I++ G + P + + +++ I+ G E+ + GD +KM+ T P+ ++ RFA+R+ +TV GV+ V Sbjct: 200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NIKMVVTLIHPIAMDDGL------RFAIREGGRTVGAGVVAKV 392
BLAST of CV884651 vs. ExPASy Swiss-Prot
Match: EFTU2_SHESR (Elongation factor Tu 2 OS=Shewanella sp. (strain MR-7) GN=tuf2 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.096e-13 Identity = 64/219 (29.22%), Postives = 105/219 (47.95%), Query Frame = -3 Query: 206 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEV--KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTK--PMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 847 L +ALD+ I EP+R DKP +P++DV+ I G GTV GRVE G+++ G V TT+ VEM + L E G+N G ++ D++RG V SK F S+V +++ + G + P + + +++ I+ G E+ + GD +KM+ T P+ ++ RFA+R+ +TV GV+ + Sbjct: 192 LAEALDSYIPEPERDIDKPFLMPIEDVFSISGRGTVVTGRVERGIVRVGDEVEIVGIRTTTKTTCTGVEMFRKLLDEGRAGENCGILLRGTKRDDVERGQVL--SKPGSINPHTTFESEVYVLSK--EEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NIKMVVTLICPIAMDEGL------RFAIREGGRTVGAGVVAKI 392
BLAST of CV884651 vs. ExPASy Swiss-Prot
Match: EFTU2_SHEB9 (Elongation factor Tu 2 OS=Shewanella baltica (strain OS195) GN=tuf2 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.096e-13 Identity = 65/219 (29.68%), Postives = 105/219 (47.95%), Query Frame = -3 Query: 206 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEV--KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTK--PMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 847 L +ALD+ I EP+R DKP LP++DV+ I G GTV GRVE G++K G V TT+ VEM + L E G+N G ++ D++RG V +K F S+V +++ + G + P + + +++ I+ G E+ + GD +KM+ T P+ ++ RFA+R+ +TV GV+ + Sbjct: 192 LANALDSYIPEPQRDIDKPFLLPIEDVFSISGRGTVVTGRVERGIVKVGDEVEIVGVRTTTKTTCTGVEMFRKLLDEGRAGENCGVLLRGTKRDDVERGQVL--AKPGSINPHTTFESEVYVLSK--EEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NIKMVVTLICPIAMDEGL------RFAIREGGRTVGAGVVAKI 392
BLAST of CV884651 vs. ExPASy Swiss-Prot
Match: EFTU2_SHEB5 (Elongation factor Tu 2 OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=tuf2 PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 2.096e-13 Identity = 65/219 (29.68%), Postives = 105/219 (47.95%), Query Frame = -3 Query: 206 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEV--KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTK--PMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 847 L +ALD+ I EP+R DKP LP++DV+ I G GTV GRVE G++K G V TT+ VEM + L E G+N G ++ D++RG V +K F S+V +++ + G + P + + +++ I+ G E+ + GD +KM+ T P+ ++ RFA+R+ +TV GV+ + Sbjct: 192 LANALDSYIPEPQRDIDKPFLLPIEDVFSISGRGTVVTGRVERGIVKVGDEVEIVGVRTTTKTTCTGVEMFRKLLDEGRAGENCGVLLRGTKRDDVERGQVL--AKPGSINPHTTFESEVYVLSK--EEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NIKMVVTLICPIAMDEGL------RFAIREGGRTVGAGVVAKI 392
BLAST of CV884651 vs. ExPASy Swiss-Prot
Match: EFTU2_PHOPR (Elongation factor Tu 2 OS=Photobacterium profundum GN=tuf2 PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 2.096e-13 Identity = 61/217 (28.11%), Postives = 102/217 (47.00%), Query Frame = -3 Query: 206 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG--MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 847 L +ALDN I EP+R D P LP++DV+ I G GTV GRVE G+++ G + + TT VEM + L E G+NVG ++ D++RG V +K F S++ +++ G + P + + +++ I+ G E+ + GD +K+ P+ ++ RFA+R+ +TV GV+ + Sbjct: 192 LAEALDNYIPEPERAIDLPFILPIEDVFSIQGRGTVVTGRVEQGIVRIGEEVAIIGIKETTTTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDDVERGQVL--AKPGSITPHTTFESEIYVLSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGDNIQMKVTLIAPIAMDEGL------RFAIREGGRTVGAGVVAKI 392
BLAST of CV884651 vs. ExPASy Swiss-Prot
Match: EFTU2_ECOUT (Elongation factor Tu 2 OS=Escherichia coli (strain UTI89 / UPEC) GN=tuf2 PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 2.096e-13 Identity = 64/213 (30.05%), Postives = 103/213 (48.36%), Query Frame = -3 Query: 206 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 826 I EP+R DKP LP++DV+ I G GTV GRVE G++K G V G+ KS VEM + L E G+NVG ++ + ++++RG V +K + F S+V I++ G + P + + +++ I+ G E+ + GD +KM+ T P+ ++ RFA+R+ +TV GV+ V Sbjct: 200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NIKMVVTLIHPIAMDDGL------RFAIREGGRTVGAGVVAKV 392
BLAST of CV884651 vs. ExPASy Swiss-Prot
Match: EFTU2_ECOLC (Elongation factor Tu 2 OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=tuf2 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.096e-13 Identity = 64/213 (30.05%), Postives = 103/213 (48.36%), Query Frame = -3 Query: 206 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 826 I EP+R DKP LP++DV+ I G GTV GRVE G++K G V G+ KS VEM + L E G+NVG ++ + ++++RG V +K + F S+V I++ G + P + + +++ I+ G E+ + GD +KM+ T P+ ++ RFA+R+ +TV GV+ V Sbjct: 200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NIKMVVTLIHPIAMDDGL------RFAIREGGRTVGAGVVAKV 392 The following BLAST results are available for this feature:
BLAST of CV884651 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884651 ID=CV884651; Name=CV884651; organism=Citrus sinensis; type=EST; length=900bpback to top |