EY665303

Overview
NameEY665303
Unique NameEY665303
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1019
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665303 vs. ExPASy Swiss-Prot
Match: PTRA_ECO57 (Protease 3 OS=Escherichia coli O157:H7 GN=ptrA PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.682e-15
Identity = 56/198 (28.28%), Postives = 93/198 (46.97%), Query Frame = 3
Query:   12 VTVDLTDSGHEHMQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVATYMETYPPQDWLVGKSLPSNFSPEIIQMTLNELSPKTVRIFWES-KQFEGKTDMVEPWYGTAYSIEKINESIIQDWILSAPEENLHLQAPNVFIPTDLSL-KDAQEAQIPSSVEKGLPIQLCGTSLTQWSSSPK 599
            ++  LTD G  +   VV  +F Y+NLL++ G  K  FDEL+ V ++ F Y      +DYV  +A  M   P +  L   ++   +  + ++  L  ++P+  RI++ S K+   KT     +    Y ++KI+E    DW   A    L L   N +IP D SL K  ++   P  +     +++       +SS PK
Sbjct:  353 ISASLTDKGLANRDQVVAAIFSYLNLLREKGIDKQYFDELANVLDIDFRYPSITRDMDYVEWLADTMIRVPVEHTLDAVNIADRYDAKAVKERLAMMTPQNARIWYISPKEPHNKTAY---FVDAPYQVDKISEQTFADWQQKAANIALSLPELNPYIPDDFSLIKSEKKYDHPELIVDESNLRVVYAPSRYFSSEPK 547          
BLAST of EY665303 vs. ExPASy Swiss-Prot
Match: PTRA_ECOL6 (Protease 3 OS=Escherichia coli O6 GN=ptrA PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.975e-15
Identity = 55/198 (27.78%), Postives = 93/198 (46.97%), Query Frame = 3
Query:   12 VTVDLTDSGHEHMQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVATYMETYPPQDWLVGKSLPSNFSPEIIQMTLNELSPKTVRIFWES-KQFEGKTDMVEPWYGTAYSIEKINESIIQDWILSAPEENLHLQAPNVFIPTDLSL-KDAQEAQIPSSVEKGLPIQLCGTSLTQWSSSPK 599
            ++  LTD G  +   VV  +F Y+NLL++ G  K  FDEL+ V ++ F Y      +DYV  +A  M   P +  L   ++   +  + ++  L  ++P+  RI++ S K+   KT     +    Y ++KI+E    DW   A    L L   N +IP D SL K  ++   P  +     +++       ++S PK
Sbjct:  353 ISASLTDKGLANRDQVVAAIFSYLNLLREKGIDKQYFDELANVLDIDFRYPSITRDMDYVEWLADTMIRVPVEHTLDAVNIADRYDAKAVKERLAMMTPQNARIWYISPKEPHNKTAY---FVDAPYQVDKISEQTFADWQKKAANIALSLPELNPYIPDDFSLIKSEKKYDHPELIVDESNLRVVYAPSRYFASEPK 547          
BLAST of EY665303 vs. ExPASy Swiss-Prot
Match: PTRA_SALTY (Protease 3 OS=Salmonella typhimurium GN=ptrA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.019e-14
Identity = 52/171 (30.41%), Postives = 82/171 (47.95%), Query Frame = 3
Query:    6 FEVTVDLTDSGHEHMQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVATYMETYPPQDWLVGKSLPSNFSPEIIQMTLNELSPKTVRIFWESKQFEGKTDMVEPWYGTA------YSIEKINESIIQDWILSAPEENLHLQAPNVFIPTDLSL 500
            F ++  LTD G  +  +VV  +F Y+N+L++ G  K  FDEL+ V ++ F Y      +DYV  +A  M   P    L   ++   + P  I+  L  ++P+  RI++ S Q        EP   TA      Y ++KI+E   ++W   A    L L   N +IP D +L
Sbjct:  351 FAISATLTDKGLANRDEVVAAIFSYLNMLREKGIDKRYFDELAHVLDLDFRYPSITRDMDYVEWLADTMIRVPVAHTLDAANIADRYDPAAIKNRLAMMTPQNARIWYISPQ--------EPHNKTAYFVDAPYQVDKISEQTFKNWQQKAQGIALSLPELNPYIPDDFTL 513          
BLAST of EY665303 vs. ExPASy Swiss-Prot
Match: PTRA_SHIFL (Protease 3 OS=Shigella flexneri GN=ptrA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.738e-14
Identity = 54/198 (27.27%), Postives = 93/198 (46.97%), Query Frame = 3
Query:   12 VTVDLTDSGHEHMQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVATYMETYPPQDWLVGKSLPSNFSPEIIQMTLNELSPKTVRIFWES-KQFEGKTDMVEPWYGTAYSIEKINESIIQDWILSAPEENLHLQAPNVFIPTDLSL-KDAQEAQIPSSVEKGLPIQLCGTSLTQWSSSPK 599
            ++  LTD G  +   VV  +F Y+NLL++ G  K  FDEL+ V ++ F Y      +DYV  +A  M   P +  L   ++   +  + ++  L  ++P+  RI++ S K+   KT     +    Y ++KI+     DW   A +  L L   N +IP D SL K  ++   P  +     +++       ++S PK
Sbjct:  353 ISASLTDKGLANRDQVVAAIFSYLNLLREKGIDKQYFDELANVLDIDFRYPSITRDMDYVEWLADTMIRVPVEHTLDAVNIADRYDAKAVKERLAMMTPQNARIWYISPKEPHNKTAY---FVDAPYQVDKISAQTFADWQKKAADIALSLPELNPYIPDDFSLIKSEKKYDHPELIVDESNLRVVYAPSRYFASEPK 547          
BLAST of EY665303 vs. ExPASy Swiss-Prot
Match: PTRA_ECOLI (Protease 3 OS=Escherichia coli (strain K12) GN=ptrA PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.738e-14
Identity = 54/198 (27.27%), Postives = 93/198 (46.97%), Query Frame = 3
Query:   12 VTVDLTDSGHEHMQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVATYMETYPPQDWLVGKSLPSNFSPEIIQMTLNELSPKTVRIFWES-KQFEGKTDMVEPWYGTAYSIEKINESIIQDWILSAPEENLHLQAPNVFIPTDLSL-KDAQEAQIPSSVEKGLPIQLCGTSLTQWSSSPK 599
            ++  LTD G  +   VV  +F Y+NLL++ G  K  FDEL+ V ++ F Y      +DYV  +A  M   P +  L   ++   +  + ++  L  ++P+  RI++ S K+   KT     +    Y ++KI+     DW   A +  L L   N +IP D SL K  ++   P  +     +++       ++S PK
Sbjct:  353 ISASLTDKGLANRDQVVAAIFSYLNLLREKGIDKQYFDELANVLDIDFRYPSITRDMDYVEWLADTMIRVPVEHTLDAVNIADRYDAKAVKERLAMMTPQNARIWYISPKEPHNKTAY---FVDAPYQVDKISAQTFADWQKKAADIALSLPELNPYIPDDFSLIKSEKKYDHPELIVDESNLRVVYAPSRYFASEPK 547          
BLAST of EY665303 vs. ExPASy Swiss-Prot
Match: PTRA_SALTI (Protease 3 OS=Salmonella typhi GN=ptrA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.271e-14
Identity = 48/165 (29.09%), Postives = 80/165 (48.48%), Query Frame = 3
Query:    6 FEVTVDLTDSGHEHMQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVATYMETYPPQDWLVGKSLPSNFSPEIIQMTLNELSPKTVRIFWESKQFEGKTDMVEPWYGTAYSIEKINESIIQDWILSAPEENLHLQAPNVFIPTDLSL 500
            F ++  LTD G  +  +VV  +F Y+N L++ G  K  FDEL+ V ++ F Y      +DYV  +A  M   P    L   ++   + P  I+  L  ++P+  RI++ S Q     + +  +    Y ++KI+E   ++W   A    L L   N +IP D +L
Sbjct:  351 FAISATLTDKGLANRDEVVAAIFSYLNTLREKGIDKRYFDELAHVLDLDFRYPSITRDMDYVEWLADTMIRVPVAHTLDAANIADRYDPAAIKNRLAMMTPQNARIWYISPQ--EPHNKIAYFVDAPYQVDKISEQTFKNWQQKAQGIALSLPELNPYIPDDFTL 513          
BLAST of EY665303 vs. ExPASy Swiss-Prot
Match: MU138_SCHPO (Putative zinc protease mug138 OS=Schizosaccharomyces pombe GN=mug138 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 5.058e-14
Identity = 49/165 (29.70%), Postives = 76/165 (46.06%), Query Frame = 3
Query:   12 VTVDLTDSGHEHMQDVVGLLFKYINLLQQSGASKWIFDELSAVCEVTFHYQDKVPPIDYVVTVATYME-TYPPQDWLVGKSLPSNFSPEIIQMTLNELSPKTVRIFWESKQFEGKTDMVEPWYGTAYSIEKINESIIQDWILSAPEENLHLQAPNVFIPTDLSLK 503
            V+  LT+ G    Q V+ +LF+YI LL Q+ A K++F+E   + E  F  + K P   Y   VA+ ++  YP    L   S+ + F P+ IQ  +  L P        +   E   D  E +YG  Y +E ++   I   +       L+L   N FIP  L ++
Sbjct:  335 VSTFLTEEGLTDYQRVIKILFEYIRLLDQTNAHKFLFEETRIMSEAQFKTRQKTPAYQYAHVVASKLQREYPRDKVLYYSSVLTEFDPKGIQEVVESLRPNNFFAILAAHSIEKGLDNKEKFYGIDYGLEDLDSQFIDSLLHIKTSSELYLPLANEFIPWSLEVE 499          
The following BLAST results are available for this feature:
BLAST of EY665303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
PTRA_ECO572.682e-1528.28Protease 3 OS=Escherichia coli O157:H7 GN=ptrA PE=... [more]
PTRA_ECOL65.975e-1527.78Protease 3 OS=Escherichia coli O6 GN=ptrA PE=3 SV=... [more]
PTRA_SALTY1.019e-1430.41Protease 3 OS=Salmonella typhimurium GN=ptrA PE=3 ... [more]
PTRA_SHIFL1.738e-1427.27Protease 3 OS=Shigella flexneri GN=ptrA PE=3 SV=1[more]
PTRA_ECOLI1.738e-1427.27Protease 3 OS=Escherichia coli (strain K12) GN=ptr... [more]
PTRA_SALTI2.271e-1429.09Protease 3 OS=Salmonella typhi GN=ptrA PE=3 SV=1[more]
MU138_SCHPO5.058e-1429.70Putative zinc protease mug138 OS=Schizosaccharomyc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-D03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665303 ID=EY665303; Name=EY665303; organism=Citrus sinensis; type=EST; length=1019bp
CATTCTTTGAAGTTACAGTTGATCTTACTGATTCTGGTCATGAGCACATG
CAAGATGTTGTGGGGTTGTTATTTAAATACATAAACCTTTTACAGCAGTC
TGGCGCTAGCAAATGGATATTTGATGAGCTTTCAGCTGTTTGTGAGGTGA
CATTTCATTATCAGGATAAAGTCCCCCCGATTGACTATGTGGTTACTGTT
GCTACCTATATGGAGACATATCCCCCTCAAGACTGGCTAGTGGGTAAATC
GTTGCCTTCCAATTTCAGTCCAGAGATTATTCAAATGACTTTGAATGAGC
TTTCTCCAAAAACTGTTCGGATTTTTTGGGAGTCAAAGCAATTTGAGGGG
AAAACAGACATGGTTGAGCCTTGGTATGGTACCGCTTATTCCATTGAGAA
AATCAATGAGTCCATAATTCAGGACTGGATACTGTCTGCTCCTGAAGAAA
ATCTGCATCTCCAAGCTCCTAATGTCTTCATCCCCACTGACTTGTCTCTT
AAGGATGCACAAGAGGCCCAAATTCCCAGTTCTGTTGAAAAAGGTCTCCC
AATTCAACTTTGTGGTACAAGCCTGACACAATGGTCCTCTTCACCCAAAG
GCATTTTGTAAAAATTTTTTTTCACCTGCCCCCATGGCTACCCGCCTCTC
CCGAAAACCGAAGTTTCTGAACGGAAATTTTTCCACACGGTTGGTTACGG
GGAATATTTTAAAAGAAAATGGCTTAACAAGGCCCCCGGTTTGCCGGGGC
CTTGAATTTGGGGAAAAAAAACCCCCACGGGAAAAGGGGGTTTTAGAAGG
TTACACGGGGGGTTGGGAAAAAAAAACAACAAAATTTTGGAGGAATTTTT
TGGGGGGAAAAAATTTTTTTTTTCAAAAAAAAAATTGGGCCAAAAATTTT
CAAAAAATCACAAAACCCCCGGGAAAAAAATATTTTTTTTTGGGGGGGGT
ATTATTAAAGAGAAAAAGAGGGGGGGAGGGAGCAAAAAAAGAAAAAAAAA
AAAACCCACAACCAAAAAA
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