CV884631

Overview
NameCV884631
Unique NameCV884631
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length789
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4678 contig Csv1_Contig4678:255..1028. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884631 vs. ExPASy Swiss-Prot
Match: CCPR_CANAL (Cytochrome c peroxidase, mitochondrial OS=Candida albicans GN=CCP1 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.016e-23
Identity = 62/170 (36.47%), Postives = 91/170 (53.53%), Query Frame = -2
Query:  318 NNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDK---AEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELL---------------TGEKDGLLQLPSDKALLDDPVFRPLVE 773
            N GL +    L  F  ++P IS  DL+ L GV  V+ +GGP I + PGR D    ++ P  GRLPDA +   +++ +F A+MG ++++ VAL G H LGRCHK  SG++GPW  +   F N ++T LL                 E    + LP+D AL ++  F   V+
Sbjct:  153 NAGLQVGREFLMEFLVKYPWISRGDLWTLGGVAAVQESGGPKIEWRPGRVDDNTASKVPPNGRLPDASKDGKYVKDLF-ARMGFNERETVALLGAHVLGRCHKHNSGYDGPWGPSFNQFTNVFYTTLLGDWHVKKWDGKKQYEDDETGEFMMLPTDMALKEESYFLKYVK 321          
BLAST of CV884631 vs. ExPASy Swiss-Prot
Match: APX6_ARATH (Putative L-ascorbate peroxidase 6 OS=Arabidopsis thaliana GN=APX6 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.025e-15
Identity = 54/153 (35.29%), Postives = 82/153 (53.59%), Query Frame = -2
Query:  342 NNGLDIAVRLLEPFK---EQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELL------TGEKDGLLQLPSDKALLDD 773
            N GL  ++++L   K   ++   +S+AD+  +AG   V + GGP IP   GR D A+P  EG+LP        L++ F  + G S +++VALSG HT+G       GF      +P +FDN+Y+  LL      T +   ++ LPSD AL+ D
Sbjct:  150 NIGLKKSLKVLAKAKVKVDEIQPVSWADMISVAGSEAVSICGGPTIPVVLGRLDSAQPDPEGKLPPETLSASGLKECF-KRKGFSTQELVALSGAHTIG-----SKGF-----GDPTVFDNAYYKILLEKPWTSTSKMTSMVGLPSDHALVQD 291          
BLAST of CV884631 vs. ExPASy Swiss-Prot
Match: PEM1_PHACH (Manganese peroxidase 1 OS=Phanerochaete chrysosporium GN=MNP1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.105e-12
Identity = 52/172 (30.23%), Postives = 78/172 (45.35%), Query Frame = -2
Query:  339 SANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGV-EVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHK-ERSGFEGPWTRNPLIFDNSYFTELL-----------------------TGEKDGLLQLPSDKALLDDP 779
            SANNG+D +V  L PF ++  TIS ADL Q AG V +    G P + F  GR +K     +G +P+ +     + Q F    G +  ++V+L   H++ R  K +++    P+   P  FD   F E+L                       +G   G ++L SD AL  DP
Sbjct:   99 SANNGIDDSVNNLIPFMQKHNTISAADLVQFAGAVALSNCPGAPRLEFLAGRPNKTIAAVDGLIPEPQDSVTKILQRFEDAGGFTPFEVVSLLASHSVARADKVDQTIDAAPFDSTPFTFDTQVFLEVLLKGVGFPGSANNTGEVASPLPLGSGSDTGEMRLQSDFALAHDP 270          
BLAST of CV884631 vs. ExPASy Swiss-Prot
Match: PEM4_PHACH (Manganese peroxidase H4 OS=Phanerochaete chrysosporium PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.583e-11
Identity = 44/129 (34.11%), Postives = 63/129 (48.84%), Query Frame = -2
Query:  399 SANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGV-EVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFE-GPWTRNPLIFDNSYFTELL 779
            SAN+G+D +V  L PF ++  TIS ADL Q AG V +    G P + F  GR +   P  EG +P+ +     + Q F      S  ++V+L   HT+ R  K     +  P+   P  FD   F E+L
Sbjct:  102 SANSGIDDSVNNLLPFMQKHDTISAADLVQFAGAVALSNCPGAPRLEFMAGRPNTTIPAVEGLIPEPQDSVTKILQRFEDAGNFSPFEVVSLLASHTVARADKVDETIDAAPFDSTPFTFDTQVFLEVL 230          
BLAST of CV884631 vs. ExPASy Swiss-Prot
Match: KATG_ERYLH (Catalase-peroxidase OS=Erythrobacter litoralis (strain HTCC2594) GN=katG PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.526e-11
Identity = 65/219 (29.68%), Postives = 86/219 (39.27%), Query Frame = -2
Query:  363 NNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP---------------------PQEGRL----------------PDAKQGNDH--------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKER-----------------------------------SGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPS 773
            N  LD A RLL P K+++   IS+ADL+ L G V +E  GGP   F  GR D  EP                     P EGR                 P+   G+ H        +R+ F A+M ++D++ VAL +GGH  G+CH  +                                   SG EGPWT NP  + N YF  L   E + L Q P+
Sbjct:  133 NGNLDKARRLLWPIKQKYGKHISWADLFILTGNVAIESMGGPVFGFGGGRKDVYEPEMVYWGTEEQWVDTGAETRIHPDEGRALENPLAAIQMGLIYVNPEGPGGDPHDPEGMARDMRETF-ARMAMNDEETVALTAGGHAFGKCHGAKPADTFGTAPEGENLHLMGMGWLTDEEEIRNGHVTTSGIEGPWTPNPTQWGNDYFRLLFKYEYE-LTQSPA 349          
The following BLAST results are available for this feature:
BLAST of CV884631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
CCPR_CANAL4.016e-2336.47Cytochrome c peroxidase, mitochondrial OS=Candida ... [more]
APX6_ARATH4.025e-1535.29Putative L-ascorbate peroxidase 6 OS=Arabidopsis t... [more]
PEM1_PHACH7.105e-1230.23Manganese peroxidase 1 OS=Phanerochaete chrysospor... [more]
PEM4_PHACH1.583e-1134.11Manganese peroxidase H4 OS=Phanerochaete chrysospo... [more]
KATG_ERYLH3.526e-1129.68Catalase-peroxidase OS=Erythrobacter litoralis (st... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008F04_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T7_F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884631 ID=CV884631; Name=CV884631; organism=Citrus sinensis; type=EST; length=789bp
TTTTTTTTTTTTTTTTTAGCCGGAAAACCGTTGATCTTATTAGTTCTAAA
GGATGATAGTAACCATAGTATTCGACCCAACTTTTCACAATCCACCATGT
GCAACAAAACAAAACCACAAAATTCCACCAACAACATCTTGAAATTCGAA
TTTTCTGAGAATTCAAAAAACATAAAATAGAGGCACACTGTTGTTGGCAT
CATTCCAACCATTTATTTACTCAGGTAAATTTAGGCTTCAGCAAATCCTA
GCTCAAAGAGCTTGAGATGAGCCTCAGCATAATCAGCGAAGAAAGCGTCC
TCATCCGCAGCATATTTCTCAACAAGAGGGCGGAAAACAGGGTCATCCAG
AAGGGCCTTGTCGGATGGCAATTGCAGAAGACCATCCTTCTCACCAGTCA
AGAGCTCCGTGAAGTAGGAATTGTCAAAAATGAGAGGGTTGCGGGTCCAT
GGTCCCTCAAATCCAGACCTCTCCTTGTGGCACCTTCCCAGGGTGTGGCC
ACCAGAGAGAGCAACAATATCCTTGTCGCTGAGGCCCATCTGAGCACCAA
AGACTTGCCTCAAGTGATCATTACCCTGTTTAGCATCAGGAAGCCGGCCT
TCTTGAGGTGGCTCAGCCTTGTCATCTCTTCCAGGGTGGAAGGGGATATC
GGGCCCACCGGTAACCTCAACGCCAACAACACCAGCAAGCTGATAAAGGT
CAGCGTAGGAGATGGTAGGGAACTGCTCCTTGAACGGCTCCAAAAGCCTA
ACGGCAATATCGAGGCCGTTGTTGGCTGAGTGTGCCTGC
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