CV884630

Overview
NameCV884630
Unique NameCV884630
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884630 vs. ExPASy Swiss-Prot
Match: CCPR_CANAL (Cytochrome c peroxidase, mitochondrial OS=Candida albicans GN=CCP1 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.461e-32
Identity = 78/206 (37.86%), Postives = 114/206 (55.34%), Query Frame = 3
Query:  153 MLRIAWHSAGTYDVKTKTGGPFG-TMRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDK---AEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELL---------------TGEKDGLLQLPSDKALLDDPVFRPLVE 713
            +LR+AWH++GTYD    +GG +G TM  A E+    N GL +    L  F  ++P IS  DL+ L GV  V+ +GGP I + PGR D    ++ P  GRLPDA +   +++ +F A+MG ++++ VAL G H LGRCHK  SG++GPW  +   F N ++T LL                 E    + LP+D AL ++  F   V+
Sbjct:  117 LLRLAWHTSGTYDKSDNSGGSYGGTMIFAPEEFDPENAGLQVGREFLMEFLVKYPWISRGDLWTLGGVAAVQESGGPKIEWRPGRVDDNTASKVPPNGRLPDASKDGKYVKDLF-ARMGFNERETVALLGAHVLGRCHKHNSGYDGPWGPSFNQFTNVFYTTLLGDWHVKKWDGKKQYEDDETGEFMMLPTDMALKEESYFLKYVK 321          
BLAST of CV884630 vs. ExPASy Swiss-Prot
Match: APX6_ARATH (Putative L-ascorbate peroxidase 6 OS=Arabidopsis thaliana GN=APX6 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.334e-21
Identity = 72/219 (32.88%), Postives = 112/219 (51.14%), Query Frame = 3
Query:   60 YPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFK---EQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELL------TGEKDGLLQLPSDKALLDD 689
            YP +  + +K V K K            A  +LR+ +H AGT+++   +GG  G+  +A E     N GL  ++++L   K   ++   +S+AD+  +AG   V + GGP IP   GR D A+P  EG+LP        L++ F  + G S +++VALSG HT+G       GF      +P +FDN+Y+  LL      T +   ++ LPSD AL+ D
Sbjct:   98 YPVMQNEIRKVVTKGK------------AAGVLRLVFHDAGTFELDDHSGGINGS--IAYELERPENIGLKKSLKVLAKAKVKVDEIQPVSWADMISVAGSEAVSICGGPTIPVVLGRLDSAQPDPEGKLPPETLSASGLKECF-KRKGFSTQELVALSGAHTIG-----SKGF-----GDPTVFDNAYYKILLEKPWTSTSKMTSMVGLPSDHALVQD 291          
BLAST of CV884630 vs. ExPASy Swiss-Prot
Match: KATG_ERYLH (Catalase-peroxidase OS=Erythrobacter litoralis (strain HTCC2594) GN=katG PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.311e-17
Identity = 79/257 (30.74%), Postives = 104/257 (40.47%), Query Frame = 3
Query:  147 PLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP---------------------PQEGRL----------------PDAKQGNDH--------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKER-----------------------------------SGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPS 668
            P  +R+AWH+AGTY      GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ L G V +E  GGP   F  GR D  EP                     P EGR                 P+   G+ H        +R+ F A+M ++D++ VAL +GGH  G+CH  +                                   SG EGPWT NP  + N YF  L   E + L Q P+
Sbjct:   95 PFFIRMAWHAAGTYRTGDGRGGSSSGQQRFAPLNSWPDNGNLDKARRLLWPIKQKYGKHISWADLFILTGNVAIESMGGPVFGFGGGRKDVYEPEMVYWGTEEQWVDTGAETRIHPDEGRALENPLAAIQMGLIYVNPEGPGGDPHDPEGMARDMRETF-ARMAMNDEETVALTAGGHAFGKCHGAKPADTFGTAPEGENLHLMGMGWLTDEEEIRNGHVTTSGIEGPWTPNPTQWGNDYFRLLFKYEYE-LTQSPA 349          
BLAST of CV884630 vs. ExPASy Swiss-Prot
Match: KATG_BACHD (Catalase-peroxidase OS=Bacillus halodurans GN=katG PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.498e-17
Identity = 76/253 (30.04%), Postives = 107/253 (42.29%), Query Frame = 3
Query:  147 PLMLRIAWHSAGTYDVKT-KTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQE-----------------------------------------GRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCH-------------------------------KER----SGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPS 668
            P  +R++WH+AGTY +   + GG  G  R A   +   N  LD A RLL P K+++   IS+ADL  LAG V +E  GGP I F  GR+D   P ++                                            PD  +    +R+ FG +MG++D++ VAL +GGHT G+ H                               K R    SG EG WT NP  +DN +F +LL G +  L + P+
Sbjct:   91 PFFIRMSWHAAGTYRIGDGRGGGGTGNQRFAPLNSWPDNGNLDKARRLLWPIKQKYGNKISWADLLVLAGNVAIEDMGGPVIGFGAGREDIWHPEEDIYWGSEKEWLTGDKRYSGDRELENPLAAVEMGLIYVNPEGPDGKPDPIKAAHDIRETFG-RMGMNDEETVALIAGGHTFGKAHGAGNPDHVGPEPEAAPIEAQGLGWQNTYGSGKGRDTITSGLEGAWTANPTQWDNGFF-DLLFGYEWWLTKSPA 341          
BLAST of CV884630 vs. ExPASy Swiss-Prot
Match: KATG_GEOKA (Catalase-peroxidase OS=Geobacillus kaustophilus GN=katG PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.472e-16
Identity = 76/243 (31.28%), Postives = 99/243 (40.74%), Query Frame = 3
Query:  147 PLMLRIAWHSAGTYDVKT-KTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQE----------------------------------------GRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCH-------------------------------KER----SGFEGPWTRNPLIFDNSYFTELLTGE 641
            PL +R+AWHSAGTY +   + GG  GT R A   +   N  LD A RLL P K+++   IS+ADL  LAG V +E  GG  I F  GR+D   P ++                                           PD       +R+ F  +MG++D++ VAL +GGHT G+ H                               K R    SG EG WT  P  +DNSYF  L   E
Sbjct:   93 PLFIRMAWHSAGTYRIGDGRGGGSTGTQRFAPLNSWPDNANLDKARRLLWPIKKKYGNKISWADLMILAGNVAIESMGGKTIGFGGGREDVWHPEEDIYWGAEKEWLASERYSGDRELENPLAAVQMGLIYVNPEGPDGKPDPVAAARDIRETF-RRMGMNDEETVALIAGGHTFGKAHGAGPASHVGPEPEAAPIEAQGLGWISSYGKGKGRDTITSGIEGAWTPTPTQWDNSYFRLLFEYE 334          
BLAST of CV884630 vs. ExPASy Swiss-Prot
Match: KATG_GEOTN (Catalase-peroxidase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=katG PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.217e-16
Identity = 75/239 (31.38%), Postives = 97/239 (40.59%), Query Frame = 3
Query:  147 PLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ------------------EGRL----------------------PDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKE-----------------------------------RSGFEGPWTRNPLIFDNSYFTEL 629
            PL +R+AWHSAGTY +    GG   GT R A   +   N  LD A RLL P K+++   IS+ADL+ LAG V +E  GG  I F  GR D   P +                  +G L                      PD K     +R+ F  +MG++D++ VAL +GGHT G+ H                                      SG EG WT  P  +D SYF  L
Sbjct:   93 PLFIRMAWHSAGTYRIGDGRGGASTGTQRFAPLNSWPDNANLDKARRLLWPIKKKYGNKISWADLFILAGNVAIESMGGKTIGFGGGRVDVWHPEEDIYWGAEKEWLASERHSDDGELEHPLAASVMGLIYVNPEGPDGKPDPKAAARDIRETF-RRMGMNDEETVALIAGGHTFGKAHGAGPATHVGPEPEAAPIEAQGLGWMSSYGKGKGSDTITSGIEGAWTPTPTQWDMSYFDML 330          
BLAST of CV884630 vs. ExPASy Swiss-Prot
Match: KATG_BACST (Catalase-peroxidase OS=Bacillus stearothermophilus GN=katG PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 7.194e-16
Identity = 73/239 (30.54%), Postives = 95/239 (39.75%), Query Frame = 3
Query:  147 PLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQE----------------------------------------GRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKE-----------------------------------RSGFEGPWTRNPLIFDNSYFTEL 629
            PL +R+AWHSAGTY +    GG   GT R A   +   N  LD A RLL P K+++   IS+ADL+ LAG V +E  GG  I F  GR D   P ++                                           PD K     +R+ F  +MG++D++ VAL +GGHT G+ H                                      SG EG WT  P  +D SYF  L
Sbjct:   93 PLFIRMAWHSAGTYRIGDGRGGASTGTQRFAPLNSWPDNANLDKARRLLWPIKKKYGNKISWADLFILAGNVAIESMGGKTIGFGGGRVDVWHPEEDVYWGSEKEWLASERYSGDRELENPLAAVQMGLIYVNPEGPDGKPDPKAAARDIRETF-RRMGMNDEETVALIAGGHTFGKAHGAGPATHVGPEPEAAPIEAQGLGWISSYGKGKGSDTITSGIEGAWTPTPTQWDTSYFDML 330          
BLAST of CV884630 vs. ExPASy Swiss-Prot
Match: KATG_SACD2 (Catalase-peroxidase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=katG PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.395e-16
Identity = 62/178 (34.83%), Postives = 89/178 (50.00%), Query Frame = 3
Query:  147 PLMLRIAWHSAGTYDVKTKTGGPFGTM-RLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ-----EGRL---------------------------PDAKQGN-------DHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 554
            P  +R++WH+AGTY +    GG  G M R A   +   N  LD A RLL+P K+++   +S++DL  LAG +G+E  G P + F  GRDD+ EP +     EG+                            P+   GN         +RQ FG +MG+SD++ VAL +GGHT G+ H
Sbjct:   97 PFFIRLSWHAAGTYRMIDGRGGADGGMQRFAPLNSWPDNASLDKARRLLQPIKQKYGNNLSWSDLLVLAGTIGMEDMGFPIVGFAFGRDDEWEPEEVNWGPEGQWLTDRRHSGDRKLDKPFGATEMGLIYVNPEGPHGNPDPIAAAHDIRQAFG-RMGMSDEETVALIAGGHTFGKAH 273          
BLAST of CV884630 vs. ExPASy Swiss-Prot
Match: KATG_MARMS (Catalase-peroxidase OS=Marinomonas sp. (strain MWYL1) GN=katG PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.039e-14
Identity = 81/301 (26.91%), Postives = 111/301 (36.88%), Query Frame = 3
Query:  147 PLMLRIAWHSAGTYDVKTKTGG-PFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ-----------------------------------------EGRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKE-----------------------------------RSGFEGPWTRNPLIFDNSYFTELLTGE---------------KDGL-----------------LQLPSDKALLDDPVFRPLVEK 716
            P  +R+AWHSAGTY      GG   GT R A   +   N  LD A RLL P K+++   IS+ADL  LAG   +E  G     F  GR D  +P +                                         EG+ PD       +R  FG +M ++D++ VAL +GGHT G+ H                                      SG EG WT++P+ +DN YF  L   +               KDG                  +   SD AL DDP++ P+ ++
Sbjct:   96 PFFIRMAWHSAGTYRTADGRGGATSGTQRFAPLNSWPDNVNLDKARRLLWPIKQKYGRKISWADLMILAGNCALESMGFKTFGFAGGRVDVWQPEEDIYWGTEKTWLDDERYTGDRELENPLAAVQMGLIYVNPEGPEGK-PDTLASARDIRDTFG-RMAMNDEETVALIAGGHTFGKAHGAGDAAQVGADPEAAGIAEQGFGWSNSMGTGKGVDTISSGLEGAWTKSPIAWDNGYFENLFEYDWELTKSPAGAWQWTPKDGAAANSVPDAHDSSKRHAPIMFTSDLALRDDPIYAPISKR 394          
BLAST of CV884630 vs. ExPASy Swiss-Prot
Match: KATG_FRASN (Catalase-peroxidase OS=Frankia sp. (strain EAN1pec) GN=katG PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.772e-14
Identity = 78/251 (31.08%), Postives = 103/251 (41.04%), Query Frame = 3
Query:  147 PLMLRIAWHSAGTYDVKT-KTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP-------PQEGRLPDAK-QGNDHLRQVFGA-QMGL------------------------------SDKDIVAL-SGGHTLGRCHKE-----------------------------------RSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPS 668
            P M+R+AWHSAGTY +   + GG  G  R A   +   N  LD A RLL P K+++   +S+ADL  LAG V +E  G     F  GR+D  EP       P+   L D +  G+  L    GA QMGL                               D++ VAL +GGHT G+ H                                      SG EG WT  P+ +DNS+F E L G +  L + P+
Sbjct:  101 PFMIRMAWHSAGTYRISDGRGGGGAGQQRFAPLNSWPDNGNLDKARRLLWPVKKKYGQALSWADLMILAGNVALESMGFTTFGFAGGREDVWEPDEDVYWGPETTWLGDERYTGDRELENPLGAVQMGLIYVNPEGPNGTPDPLAAARDIRETFRRMAMDDEETVALIAGGHTFGKTHGAGDPDNVGPEPEGAPLETQGLGWKNAFGTGKGADAITSGLEGAWTPTPVSWDNSFF-ETLFGYEWALTKSPA 350          
The following BLAST results are available for this feature:
BLAST of CV884630 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
CCPR_CANAL2.461e-3237.86Cytochrome c peroxidase, mitochondrial OS=Candida ... [more]
APX6_ARATH3.334e-2132.88Putative L-ascorbate peroxidase 6 OS=Arabidopsis t... [more]
KATG_ERYLH1.311e-1730.74Catalase-peroxidase OS=Erythrobacter litoralis (st... [more]
KATG_BACHD8.498e-1730.04Catalase-peroxidase OS=Bacillus halodurans GN=katG... [more]
KATG_GEOKA2.472e-1631.28Catalase-peroxidase OS=Geobacillus kaustophilus GN... [more]
KATG_GEOTN4.217e-1631.38Catalase-peroxidase OS=Geobacillus thermodenitrifi... [more]
KATG_BACST7.194e-1630.54Catalase-peroxidase OS=Bacillus stearothermophilus... [more]
KATG_SACD29.395e-1634.83Catalase-peroxidase OS=Saccharophagus degradans (s... [more]
KATG_MARMS1.039e-1426.91Catalase-peroxidase OS=Marinomonas sp. (strain MWY... [more]
KATG_FRASN1.772e-1431.08Catalase-peroxidase OS=Frankia sp. (strain EAN1pec... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008F04_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T3_F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884630 ID=CV884630; Name=CV884630; organism=Citrus sinensis; type=EST; length=864bp
GTTAAGGATTTGCGTCTCTCTTTCTCATTTCATTCAGCGTTGAAAAGATG
ACGAAGAATTACCCCACTGTTAGCGAGGATTACAAGAAGGCCGTGGAGAA
ATGCAAGAGGAAGCTCAGAGGCTTCATCGCTGAGAAGAACTGCGCTCCAC
TCATGCTCCGTATCGCGTGGCACTCAGCTGGTACATATGATGTGAAGACC
AAGACCGGAGGTCCATTCGGAACCATGAGGCTCGCTGCTGAGCAGGCACA
CTCAGCCAACAACGGCCTCGATATTGCCGTTAGGCTTTTGGAGCCGTTCA
AGGAGCAGTTCCCTACCATCTCCTACGCTGACCTTTATCAGCTTGCTGGT
GTTGTTGGCGTTGAGGTTACCGGTGGGCCCGATATCCCCTTCCACCCTGG
AAGAGATGACAAGGCTGAGCCACCTCAAGAAGGCCGGCTTCCTGATGCTA
AACAGGGTAATGATCACTTGAGGCAAGTCTTTGGTGCTCAGATGGGCCTC
AGCGACAAGGATATTGTTGCTCTCTCTGGTGGCCACACCCTGGGAAGGTG
CCACAAGGAGAGGTCTGGATTTGAGGGACCATGGACCCGCAACCCTCTCA
TTTTTGACAATTCCTACTTCACGGAGCTCTTGACTGGTGAGAAGGATGGT
CTTCTGCAATTGCCATCCGACAAGGCCCTTCTGGATGACCCTGTTTTCCG
CCCTCTTGTTGAGAAATATGCTGCGGATGAGGACGCTTTCTTCGCTGATT
ATGCTGAGGCTCATCTCAAGCTCTCTGAGCTAGGATTTGCTGAAGCCTAA
ATTTACCTGAGTAAATAAATGGTTGGAATGATGCCCACAACAGTGTGCCT
CTATTTTATGTTTT
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