CV884630

Overview
NameCV884630
Unique NameCV884630
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4678 contig Csv1_Contig4678:14..877. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884630 vs. ExPASy Swiss-Prot
Match: KATG2_LEGPC (Catalase-peroxidase 2 OS=Legionella pneumophila (strain Corby) GN=katG2 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.342e-13
Identity = 61/191 (31.94%), Postives = 86/191 (45.03%), Query Frame = 3
Query:  138 NCAPLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAE---------------------------------------PPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKERSG-FEGP 581
            N  PL +R++WH+AGTY +    GG   G  R A + +   N  LD A RLL P K+++   IS+ADL  LAG V +E  G   I F  GR+D  E                                       P     +PD     + +R+ FG +M ++D++ VAL +GGH  G+ H   SG + GP
Sbjct:   97 NYGPLFIRMSWHAAGTYRIYDGRGGANGGFQRFAPQNSWPDNANLDKARRLLWPIKQKYGRKISWADLLVLAGNVAMESMGFKTIGFAGGREDAWEAININWGPEGKWLESKRQDKDGKLEKPLAATVMGLIYVNPEGPNGVPDPLAAAEKIRETFG-RMAMNDEETVALIAGGHAFGKTHGAASGKYLGP 286          
BLAST of CV884630 vs. ExPASy Swiss-Prot
Match: KATG2_LEGPA (Catalase-peroxidase 2 OS=Legionella pneumophila (strain Paris) GN=katG2 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.342e-13
Identity = 61/191 (31.94%), Postives = 86/191 (45.03%), Query Frame = 3
Query:  138 NCAPLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAE---------------------------------------PPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKERSG-FEGP 581
            N  PL +R++WH+AGTY +    GG   G  R A + +   N  LD A RLL P K+++   IS+ADL  LAG V +E  G   I F  GR+D  E                                       P     +PD     + +R+ FG +M ++D++ VAL +GGH  G+ H   SG + GP
Sbjct:   97 NYGPLFIRMSWHAAGTYRIYDGRGGANGGFQRFAPQNSWPDNANLDKARRLLWPIKQKYGRKISWADLLVLAGNVAMESMGFKTIGFAGGREDAWEAININWGPEGKWLESKRQDKDGKLEKPLAATVMGLIYVNPEGPNGVPDPLAAAEKIRETFG-RMAMNDEETVALIAGGHAFGKTHGAASGKYLGP 286          
BLAST of CV884630 vs. ExPASy Swiss-Prot
Match: KATG_ENT38 (Catalase-peroxidase OS=Enterobacter sp. (strain 638) GN=katG PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.364e-13
Identity = 61/176 (34.66%), Postives = 79/176 (44.89%), Query Frame = 3
Query:  150 LMLRIAWHSAGTY-DVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDH--------------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 554
            L +R+AWH AGTY  V  + G   G  R A   A   N  LD A RLL P K+++   IS+ADLY LAG V +E +G     F  GR+D  EP  +    D K    H                                      +R  FG  MG++D++ VAL +GGHTLG+ H
Sbjct:   99 LFIRMAWHGAGTYRSVDGRGGAGRGQQRFAPLNAWPDNVSLDKARRLLWPIKQKYGQKISWADLYILAGNVALENSGFRTFGFGAGREDVWEPDMDVNWGDEKAWLTHRDPESLAKRPLAATEMGLIYVNPEGPNASGEPLSAAAAIRATFG-NMGMNDEETVALIAGGHTLGKTH 273          
BLAST of CV884630 vs. ExPASy Swiss-Prot
Match: PEM1_PHACH (Manganese peroxidase 1 OS=Phanerochaete chrysosporium GN=MNP1 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.700e-13
Identity = 58/189 (30.69%), Postives = 85/189 (44.97%), Query Frame = 3
Query:  207 GGPFGTMRL--AAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGV-EVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHK-ERSGFEGPWTRNPLIFDNSYFTELL-----------------------TGEKDGLLQLPSDKALLDDP 692
            GG  G+M L    E   SANNG+D +V  L PF ++  TIS ADL Q AG V +    G P + F  GR +K     +G +P+ +     + Q F    G +  ++V+L   H++ R  K +++    P+   P  FD   F E+L                       +G   G ++L SD AL  DP
Sbjct:   82 GGADGSMLLFPTVEPNFSANNGIDDSVNNLIPFMQKHNTISAADLVQFAGAVALSNCPGAPRLEFLAGRPNKTIAAVDGLIPEPQDSVTKILQRFEDAGGFTPFEVVSLLASHSVARADKVDQTIDAAPFDSTPFTFDTQVFLEVLLKGVGFPGSANNTGEVASPLPLGSGSDTGEMRLQSDFALAHDP 270          
BLAST of CV884630 vs. ExPASy Swiss-Prot
Match: KATG_SYNPW (Catalase-peroxidase OS=Synechococcus sp. (strain WH7803) GN=katG PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.700e-13
Identity = 70/242 (28.93%), Postives = 93/242 (38.43%), Query Frame = 3
Query:  150 LMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQE------------------GRL----------------------PDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKE-----------------------------------RSGFEGPWTRNPLIFDNSYFTELLTGE 641
            L +R+AWHSAGTY      GG   G  R A   +   N  LD A RLL P K ++   IS+ADL  L+G V +E  G     F  GR+D  +P ++                  G L                      PD       +R+ F A+MG++ ++ VAL +GGHT G+CH                                      SG EG W  NP  +D  YF  + T E
Sbjct:   89 LFIRLAWHSAGTYRTGDGRGGAGHGNQRFAPLNSWPDNTNLDKARRLLWPIKRKYGNAISWADLIILSGNVALESMGFRTFGFAGGREDIWQPEEDVFWGKETGWLKDERRNDKGELNQPLAAVEMGLIYVNPEGPHGEPDPVASGRDVRETF-ARMGMTVEETVALVAGGHTFGKCHGAAPDSHLEAEPEGAALHEQGLGWRNTYESGKGEHTITSGIEGAWKPNPTRWDQGYFQMMFTYE 329          
BLAST of CV884630 vs. ExPASy Swiss-Prot
Match: KATG_SALRD (Catalase-peroxidase OS=Salinibacter ruber (strain DSM 13855) GN=katG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.270e-12
Identity = 70/243 (28.81%), Postives = 94/243 (38.68%), Query Frame = 3
Query:  147 PLMLRIAWHSAGTYDVKTKTGGPFG-TMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQE------------GRL----------------------------PDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKE-----------------------------------RSGFEGPWTRNPLIFDNSYFTELLTGE 641
            PL +R++WH+AGTY      GG  G   RLA   +   N  LD A RLL P K+++   IS+ADL  LAG V +E  G     F  GR+D  +P +             GR                             PD +     +R+ FG +M ++D++  AL +GGHT G+ H                                      SG EGPWT  P  +D  Y   LL  E
Sbjct:   84 PLFIRMSWHAAGTYRTTDGRGGSSGGRQRLAPLNSWPDNANLDKARRLLWPVKQKYGRKISWADLLVLAGNVAMESMGFETFGFAGGREDDFKPDESIDWGPEDEMETWGRFNEEDELDNPLGATVMGLIYVNPEGPESTPDPEWSAQRIRKSFG-RMAMNDRETAALIAGGHTFGKVHGADTDEHLQAEPEAAPIEQQGLGWHNEHGSGKGGDTITSGIEGPWTDAPTEWDMGYLDFLLDYE 325          
BLAST of CV884630 vs. ExPASy Swiss-Prot
Match: KATG_ACIBY (Catalase-peroxidase OS=Acinetobacter baumannii (strain AYE) GN=katG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.270e-12
Identity = 59/180 (32.78%), Postives = 81/180 (45.00%), Query Frame = 3
Query:  138 NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDH--------------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 554
            N   L +R+AWH+AGTY +    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ LAG + +E +G     F  GR+D  EP  +    D K+   H                                      +R  FG  M + D++IVAL +GGHTLG+ H
Sbjct:   88 NYTGLFIRLAWHAAGTYRMGDGRGGAGRGQQRFAPLNSWPDNASLDKARRLLWPVKQKYGQKISWADLFILAGNIALESSGFRTFGFGAGREDVWEPDNDVNWGDEKEWLAHRNSEALAGSNLAATEMGLIYVNPEGPQASGDPRSAAPFIRATFG-NMAMDDEEIVALIAGGHTLGKTH 266          
BLAST of CV884630 vs. ExPASy Swiss-Prot
Match: KATG_ACIBT (Catalase-peroxidase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=katG PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.270e-12
Identity = 59/180 (32.78%), Postives = 81/180 (45.00%), Query Frame = 3
Query:  138 NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDH--------------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 554
            N   L +R+AWH+AGTY +    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ LAG + +E +G     F  GR+D  EP  +    D K+   H                                      +R  FG  M + D++IVAL +GGHTLG+ H
Sbjct:   88 NYTGLFIRLAWHAAGTYRMGDGRGGAGRGQQRFAPLNSWPDNASLDKARRLLWPVKQKYGQKISWADLFILAGNIALESSGFRTFGFGAGREDVWEPDNDVNWGDEKEWLAHRNSEALAGSNLAATEMGLIYVNPEGPQASGDPRSAAPFIRATFG-NMAMDDEEIVALIAGGHTLGKTH 266          
BLAST of CV884630 vs. ExPASy Swiss-Prot
Match: KATG_ACIBC (Catalase-peroxidase OS=Acinetobacter baumannii (strain ACICU) GN=katG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.270e-12
Identity = 59/180 (32.78%), Postives = 81/180 (45.00%), Query Frame = 3
Query:  138 NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDH--------------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 554
            N   L +R+AWH+AGTY +    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ LAG + +E +G     F  GR+D  EP  +    D K+   H                                      +R  FG  M + D++IVAL +GGHTLG+ H
Sbjct:   88 NYTGLFIRLAWHAAGTYRMGDGRGGAGRGQQRFAPLNSWPDNASLDKARRLLWPVKQKYGQKISWADLFILAGNIALESSGFRTFGFGAGREDVWEPDNDVNWGDEKEWLAHRNSEALAGSNLAATEMGLIYVNPEGPQASGDPRSAAPFIRATFG-NMAMDDEEIVALIAGGHTLGKTH 266          
BLAST of CV884630 vs. ExPASy Swiss-Prot
Match: KATG_ACIB5 (Catalase-peroxidase OS=Acinetobacter baumannii (strain AB0057) GN=katG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.270e-12
Identity = 59/180 (32.78%), Postives = 81/180 (45.00%), Query Frame = 3
Query:  138 NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDH--------------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 554
            N   L +R+AWH+AGTY +    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ LAG + +E +G     F  GR+D  EP  +    D K+   H                                      +R  FG  M + D++IVAL +GGHTLG+ H
Sbjct:   88 NYTGLFIRLAWHAAGTYRMGDGRGGAGRGQQRFAPLNSWPDNASLDKARRLLWPVKQKYGQKISWADLFILAGNIALESSGFRTFGFGAGREDVWEPDNDVNWGDEKEWLAHRNSEALAGSNLAATEMGLIYVNPEGPQASGDPRSAAPFIRATFG-NMAMDDEEIVALIAGGHTLGKTH 266          
The following BLAST results are available for this feature:
BLAST of CV884630 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
KATG2_LEGPC3.342e-1331.94Catalase-peroxidase 2 OS=Legionella pneumophila (s... [more]
KATG2_LEGPA3.342e-1331.94Catalase-peroxidase 2 OS=Legionella pneumophila (s... [more]
KATG_ENT384.364e-1334.66Catalase-peroxidase OS=Enterobacter sp. (strain 63... [more]
PEM1_PHACH5.700e-1330.69Manganese peroxidase 1 OS=Phanerochaete chrysospor... [more]
KATG_SYNPW5.700e-1328.93Catalase-peroxidase OS=Synechococcus sp. (strain W... [more]
KATG_SALRD1.270e-1228.81Catalase-peroxidase OS=Salinibacter ruber (strain ... [more]
KATG_ACIBY1.270e-1232.78Catalase-peroxidase OS=Acinetobacter baumannii (st... [more]
KATG_ACIBT1.270e-1232.78Catalase-peroxidase OS=Acinetobacter baumannii (st... [more]
KATG_ACIBC1.270e-1232.78Catalase-peroxidase OS=Acinetobacter baumannii (st... [more]
KATG_ACIB51.270e-1232.78Catalase-peroxidase OS=Acinetobacter baumannii (st... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_008F04_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T3_F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884630 ID=CV884630; Name=CV884630; organism=Citrus sinensis; type=EST; length=864bp
GTTAAGGATTTGCGTCTCTCTTTCTCATTTCATTCAGCGTTGAAAAGATG
ACGAAGAATTACCCCACTGTTAGCGAGGATTACAAGAAGGCCGTGGAGAA
ATGCAAGAGGAAGCTCAGAGGCTTCATCGCTGAGAAGAACTGCGCTCCAC
TCATGCTCCGTATCGCGTGGCACTCAGCTGGTACATATGATGTGAAGACC
AAGACCGGAGGTCCATTCGGAACCATGAGGCTCGCTGCTGAGCAGGCACA
CTCAGCCAACAACGGCCTCGATATTGCCGTTAGGCTTTTGGAGCCGTTCA
AGGAGCAGTTCCCTACCATCTCCTACGCTGACCTTTATCAGCTTGCTGGT
GTTGTTGGCGTTGAGGTTACCGGTGGGCCCGATATCCCCTTCCACCCTGG
AAGAGATGACAAGGCTGAGCCACCTCAAGAAGGCCGGCTTCCTGATGCTA
AACAGGGTAATGATCACTTGAGGCAAGTCTTTGGTGCTCAGATGGGCCTC
AGCGACAAGGATATTGTTGCTCTCTCTGGTGGCCACACCCTGGGAAGGTG
CCACAAGGAGAGGTCTGGATTTGAGGGACCATGGACCCGCAACCCTCTCA
TTTTTGACAATTCCTACTTCACGGAGCTCTTGACTGGTGAGAAGGATGGT
CTTCTGCAATTGCCATCCGACAAGGCCCTTCTGGATGACCCTGTTTTCCG
CCCTCTTGTTGAGAAATATGCTGCGGATGAGGACGCTTTCTTCGCTGATT
ATGCTGAGGCTCATCTCAAGCTCTCTGAGCTAGGATTTGCTGAAGCCTAA
ATTTACCTGAGTAAATAAATGGTTGGAATGATGCCCACAACAGTGTGCCT
CTATTTTATGTTTT
back to top