CV884627
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_GRABC (Triosephosphate isomerase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=tpiA PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.811e-35 Identity = 94/234 (40.17%), Postives = 120/234 (51.28%), Query Frame = -2 Query: 267 GNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXVKSVLR-SDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTK-AIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 962 GNWK NG + ++ L A SVL S V AQ+C + + GA TG++SAEMLV WVILGHSERR E ++ V +KV A GL I CVGET ++R SG +V Q K ++ + + N V+AYEPVWAIGTG+ AT +HA +R+ L E RI+YGGSV N L P+V G LVGGASL + Sbjct: 7 GNWKMNGLRSTSESLLQALRDAAPHALRNCDMLICPPATLIAQAASVLAGSGIEVGAQDCHMARSGAHTGDLSAEMLVEAGAHWVILGHSERRRDHGELSETVREKVIAARQFGLTPIVCVGETEDERASGRETEIVGWQIKGSLPDGFAADSNGVIAYEPVWAIGTGRTATVEDVAMMHAFIREELVRQF-GEAGRGVRILYGGSVKPENAASLLRVPEVGGALVGGASLSAQ 239
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_DESVV (Triosephosphate isomerase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=tpiA PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.811e-35 Identity = 80/182 (43.96%), Postives = 118/182 (64.84%), Query Frame = -2 Query: 273 FHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTK-AIAEKISNW--DNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 809 F + Q+ + GA+TGE++ ML++ WV+ GHSERR +L E ++ V K A++L GL+V+ C+GE L++RE+G V+A Q + +A+ + + ++V+AYEPVWAIGTGKVA PA+ E HA +R L+ + A+ RI+YGGSV N EL + +VDG LVGGASL+ Sbjct: 61 FAIGGQDVYPATEGAYTGEIAPGMLLDAGCGWVLTGHSERRHILGEDDETVARKTAFSLKAGLRVVLCIGEKLDEREAGRLEDVLAHQLQVGLADVDATYVPQSLVVAYEPVWAIGTGKVAGPAEVVEAHALVRSLLEARYGRD-GAAIRILYGGSVKPDNAAELLSLDNVDGLLVGGASLQ 241
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_DESVM (Triosephosphate isomerase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=tpiA PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.811e-35 Identity = 79/184 (42.93%), Postives = 115/184 (62.50%), Query Frame = -2 Query: 267 FHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN---WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 809 + V Q+ + GA+TGE+S ML++ WV+ GHSERR ++ ES++ VG K A++++ GLKV+ C+GET+E+RE+G V+ Q + + + +AYEPVWAIGTGKVA P + E HA +R+ L E + RI+YGGSV N +E+ A +VDG LVGGASL+ + Sbjct: 61 YSVGGQDVYPAAEGAYTGEISPGMLMDCGCAWVLTGHSERRHVIGESDELVGAKTAFSINAGLKVVLCIGETIEEREAGRLGEVLERQLETGLAGVKGDAVPAAIAVAYEPVWAIGTGKVAGPPEIVEAHALVRQLLVARF-GEGGVAVRILYGGSVKPENAREIIALDNVDGVLVGGASLQAD 243
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_DESVH (Triosephosphate isomerase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=tpiA PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.811e-35 Identity = 80/182 (43.96%), Postives = 118/182 (64.84%), Query Frame = -2 Query: 273 FHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTK-AIAEKISNW--DNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 809 F + Q+ + GA+TGE++ ML++ WV+ GHSERR +L E ++ V K A++L GL+V+ C+GE L++RE+G V+A Q + +A+ + + ++V+AYEPVWAIGTGKVA PA+ E HA +R L+ + A+ RI+YGGSV N EL + +VDG LVGGASL+ Sbjct: 61 FAIGGQDVYPATEGAYTGEIAPGMLLDAGCGWVLTGHSERRHILGEDDETVARKTAFSLKAGLRVVLCIGEKLDEREAGRLEDVLAHQLQVGLADVDATYVPQSLVVAYEPVWAIGTGKVAGPAEVVEAHALVRSLLEARYGRD-GAAIRILYGGSVKPDNAAELLSLDNVDGLLVGGASLQ 241
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_BUCAP (Triosephosphate isomerase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=tpiA PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 3.672e-35 Identity = 89/243 (36.63%), Postives = 130/243 (53.50%), Query Frame = -2 Query: 249 NWKCNGTSEEVKKIVSTL-NQAEXXXXXXXXXXXXXXXXXXXXVKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLK--DNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIK 959 NWK NG+ + + ++ L +Q K + + H+AAQN V GAFTGE SA M+ ++ + ++I+GHSERR L NE+N+ + K + L I C+GET +++S T ++ EQ +I + N V+AYEP+W+IGTG A P Q +H ++ ++K D VSAE + + YGGSV N QPD+DG L+G ASLK EF+ IIK Sbjct: 9 NWKLNGSIKTISYFLTFLKSQISSFLKNNIIIIAPPTVFLERVYKDINSINIHLAAQNIDVNLTGAFTGENSALMMKDIGVKYIIIGHSERRLLHNENNEIIAKKFCLVKNLNLVPILCIGETEAEKKSNKTEKILKEQLNSIFNSFGEKAFRNAVIAYEPIWSIGTGVSADPKNVQLIHKFIKNYIKKYDIVSAE---NLIVQYGGSVTSLNAGNFLKQPDIDGLLIGSASLKHEEFLKIIK 248
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_BIFAA (Triosephosphate isomerase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=tpiA PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 3.672e-35 Identity = 80/190 (42.11%), Postives = 115/190 (60.53%), Query Frame = -2 Query: 234 AQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSATVK 797 AQ V GAFTG+VSA+M+ +L +VI+GHSERR E + + D+V L+ G++ I CVGE+ E+R G + Q + +S+ + +++AYEPVWAIGTG VATP AQ+ +R L D V + RI+YGGSV+ N EL +PDVDGFL+GG++LK + + I T++ Sbjct: 72 AQAVSVTSQGAFTGDVSADMIAHLGCSYVIVGHSERRKYHPEDDANIVDQVRAVLAAGMQPILCVGESYEERRKGIELDFAVGQVHDVTRDLSDEEAAKLIVAYEPVWAIGTGMVATPQSAQDAARAIRNDLSDTFGTRVGETVRILYGGSVSSKNAVELINEPDVDGFLIGGSALKVDELTRICKLTLE 261
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_RHOP5 (Triosephosphate isomerase OS=Rhodopseudomonas palustris (strain BisA53) GN=tpiA PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 4.795e-35 Identity = 91/232 (39.22%), Postives = 120/232 (51.72%), Query Frame = -2 Query: 273 GNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXVKSVLRS--DFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 962 GNWK NG ++ + + L A + + F V AQ+C GA TG++SAEMLV+ +I+GHSERRA E++ V K A G I CVGET +R++G T+ VV Q + +N V+AYEPVWAIGTG T ++VH +R L E A+ RI+YGGSV +N KEL A P+V+G LVGGASLK Sbjct: 11 GNWKMNGLKAQLAEFEAMLAGAPALADKADLLVCPPATLLHAFGQKLGNGARSFAVGAQDCHANVSGAHTGDLSAEMLVDAGASAIIVGHSERRADHGETDSVVRAKAEAAWRAGAVAIVCVGETQAERDAGQTLDVVGRQLAGSLPDGATAENTVVAYEPVWAIGTGLTPTANDVEQVHKFIRDCLTKRFGGE-GAAVRILYGGSVKPSNAKELMAVPEVNGALVGGASLK 241
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_STRTD (Triosephosphate isomerase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=tpiA PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 6.263e-35 Identity = 88/244 (36.07%), Postives = 124/244 (50.82%), Query Frame = -2 Query: 249 GNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXVKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE----FIDIIK 962 GNWK N EE K V + + + S+ VAAQN + GAFTGE S ++L + +V++GHSERR +E+++ + K + G+ I C GE+LE E+G V Q A ++ + V+AYEP+WAIGTGK A+ AQ++ +R + + EVA R++YGGSV N E A PDVDG LVGGASL+PE +D +K Sbjct: 9 GNWKMNKNPEEAKAFVEAVASKLPSADLVEAGIAVPAVDLTTVIAAAKGSNLKVAAQNTYFENSGAFTGETSPQVLKEIGTDYVVIGHSERRDYFHETDEDINKKAKAIFANGMIPIICCGESLETYEAGKAAEFVGAQVSAALAGLTPEQVASSVIAYEPIWAIGTGKSASQDDAQKMCKVVRDVVAADFGQEVADKVRVLYGGSVKPENVAEYMACPDVDGALVGGASLEPESFLALLDFVK 252
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_STRT2 (Triosephosphate isomerase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=tpiA PE=3 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 6.263e-35 Identity = 88/244 (36.07%), Postives = 124/244 (50.82%), Query Frame = -2 Query: 249 GNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXVKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE----FIDIIK 962 GNWK N EE K V + + + S+ VAAQN + GAFTGE S ++L + +V++GHSERR +E+++ + K + G+ I C GE+LE E+G V Q A ++ + V+AYEP+WAIGTGK A+ AQ++ +R + + EVA R++YGGSV N E A PDVDG LVGGASL+PE +D +K Sbjct: 9 GNWKMNKNPEEAKAFVEAVASKLPSADLVEAGIAVPAVDLTTVIAAAKGSNLKVAAQNTYFENSGAFTGETSPQVLKEIGTDYVVIGHSERRDYFHETDEDINKKAKAIFANGMIPIICCGESLETYEAGKAAEFVGAQVSAALAGLTPEQVASSVIAYEPIWAIGTGKSASQDDAQKMCKVVRDVVAADFGQEVADKVRVLYGGSVKPENVAEYMACPDVDGALVGGASLEPESFLALLDFVK 252
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_STRT1 (Triosephosphate isomerase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=tpiA PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 6.263e-35 Identity = 88/244 (36.07%), Postives = 124/244 (50.82%), Query Frame = -2 Query: 249 GNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXVKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE----FIDIIK 962 GNWK N EE K V + + + S+ VAAQN + GAFTGE S ++L + +V++GHSERR +E+++ + K + G+ I C GE+LE E+G V Q A ++ + V+AYEP+WAIGTGK A+ AQ++ +R + + EVA R++YGGSV N E A PDVDG LVGGASL+PE +D +K Sbjct: 9 GNWKMNKNPEEAKAFVEAVASKLPSADLVEAGIAVPAVDLTTVIAAAKGSNLKVAAQNTYFENSGAFTGETSPQVLKEIGTDYVVIGHSERRDYFHETDEDINKKAKAIFANGMIPIICCGESLETYEAGKAAEFVGAQVSAALAGLTPEQVASSVIAYEPIWAIGTGKSASQDDAQKMCKVVRDVVAADFGQEVADKVRVLYGGSVKPENVAEYMACPDVDGALVGGASLEPESFLALLDFVK 252 The following BLAST results are available for this feature:
BLAST of CV884627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884627 ID=CV884627; Name=CV884627; organism=Citrus sinensis; type=EST; length=963bpback to top |