CV884627
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_MYCHR (Triosephosphate isomerase OS=Mycoplasma hyorhinis GN=tpiA PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 6.263e-35 Identity = 91/247 (36.84%), Postives = 132/247 (53.44%), Query Frame = -2 Query: 231 GNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXVKSVLRSD---FHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSATVKK 962 GNWK N T + K+ S NQ + + +A QN + GA+TGE+SA+ML++L++ + I+GHSERR E++ V K A+ + + CVGETLE+ E+ T V+ Q K + + + V++AYEP+WAIGTGK ATP QAQ+V +RK N++ I+YGGSV+ N ++L Q D++G LVGGASLK + IK T+ K Sbjct: 8 GNWKMNKTFTQTKEFFSAFNQLYIENKNKINQNLDFAVALPAINVAAFSKNTTKLELAVQNMSQFEKGAYTGEISAQMLLDLNVKYAIIGHSERRQYFKETDLDVNAKTQQAIKNNIIPVVCVGETLEEYEAQKTSQVIEYQLKNSLKDV-DLSKVIVAYEPIWAIGTGKTATPEQAQQVCKFIRKQTNKNLT--------ILYGGSVSQENIEQLLNQADINGALVGGASLKVD--SFIKLLTLNK 243
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_BRAJA (Triosephosphate isomerase OS=Bradyrhizobium japonicum GN=tpiA PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 8.179e-35 Identity = 89/239 (37.24%), Postives = 121/239 (50.63%), Query Frame = -2 Query: 249 GNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXVKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIK 962 GNWK NG + + LN A V AQ+C + GA TG+++AEML N +I+GHSERRA E + V K A G+ I C+GET QR++G T+ ++ Q S N+V+AYEPVWAIGTG T +++H +R++L S + A RI+YGGSV +N EL A +V+G LVGGASLK +F+ I K Sbjct: 11 GNWKMNGLKASAAEFDAMLNGAADVATKADLLVCPPATLIAAFADKARGKKVAVGAQDCHPKASGAHTGDIAAEMLANAGATAIIVGHSERRADHGEGDALVRQKAEAAWRAGVTAIVCIGETQAQRDAGQTLDILRGQLDGSLPDGSTAANLVVAYEPVWAIGTGLTPTVQDVEQIHGFIREFLTSRFSVD-GAKMRILYGGSVKPSNAAELMAVKNVNGALVGGASLKAADFLAIAK 248
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_STRGC (Triosephosphate isomerase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=tpiA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.068e-34 Identity = 89/247 (36.03%), Postives = 125/247 (50.61%), Query Frame = -2 Query: 249 GNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXVKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAI-----AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE----FIDIIK 962 GNWK N EE K V + + + S+ VAAQNC+ GAFTGE S ++L + +V++GHSERR +E+++ + K + G+ I C GE+LE E+G V Q A AE++++ V+AYEP+WAIGTGK A+ AQ++ +R + + EVA R+ YGGSV N A PDVDG LVGGASL+ E +D +K Sbjct: 9 GNWKMNKNPEEAKAFVEAVASKLPSSDLVEAGIAAPAVDLTAVLAAAKGSNLKVAAQNCYFENSGAFTGETSPQVLKEIGTDYVVIGHSERRDYFHETDEDINKKAKAIFANGMLPIICCGESLETYEAGKAAEFVGAQVSAALAGLTAEQVAS---TVIAYEPIWAIGTGKSASQDDAQKMCKVVRDVVAADFGQEVADKVRVQYGGSVKPENVASYMACPDVDGALVGGASLEAESFLALLDFVK 252
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_STRA5 (Triosephosphate isomerase OS=Streptococcus agalactiae serotype V GN=tpiA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.068e-34 Identity = 88/244 (36.07%), Postives = 122/244 (50.00%), Query Frame = -2 Query: 249 GNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXVKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE----FIDIIK 962 GNWK N EE K + + +++ S+ +AAQN + GAFTGE S ++L + +V++GHSERR +E++ + K + GL I C GE+LE E+G V V Q A +S ++V+AYEP+WAIGTGK AT AQ + +R + + VA R+ YGGSV N E A PDVDG LVGGASL+ E +D +K Sbjct: 9 GNWKMNKNPEEAKAFIEAVASKLPSSELVEAGIAAPALTLSTVLEAAKGSELKIAAQNSYFENSGAFTGENSPKVLAEMGTDYVVIGHSERRDYFHETDQDINKKAKAIFANGLTPIICCGESLETYEAGKAVEFVGAQVSAALAGLSEEQVSSLVIAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQAVADKVRVQYGGSVKPENVAEYMACPDVDGALVGGASLEAESFLALLDFVK 252
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_STRA3 (Triosephosphate isomerase OS=Streptococcus agalactiae serotype III GN=tpiA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.068e-34 Identity = 88/244 (36.07%), Postives = 122/244 (50.00%), Query Frame = -2 Query: 249 GNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXVKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE----FIDIIK 962 GNWK N EE K + + +++ S+ +AAQN + GAFTGE S ++L + +V++GHSERR +E++ + K + GL I C GE+LE E+G V V Q A +S ++V+AYEP+WAIGTGK AT AQ + +R + + VA R+ YGGSV N E A PDVDG LVGGASL+ E +D +K Sbjct: 9 GNWKMNKNPEEAKAFIEAVASKLPSSELVEAGIAAPALTLSTVLEAAKGSELKIAAQNSYFENSGAFTGENSPKVLAEMGTDYVVIGHSERRDYFHETDQDINKKAKAIFANGLTPIICCGESLETYEAGKAVEFVGAQVSAALAGLSEEQVSSLVIAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQAVADKVRVQYGGSVKPENVAEYMACPDVDGALVGGASLEAESFLALLDFVK 252
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_STRA1 (Triosephosphate isomerase OS=Streptococcus agalactiae serotype Ia GN=tpiA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.068e-34 Identity = 88/244 (36.07%), Postives = 122/244 (50.00%), Query Frame = -2 Query: 249 GNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXVKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE----FIDIIK 962 GNWK N EE K + + +++ S+ +AAQN + GAFTGE S ++L + +V++GHSERR +E++ + K + GL I C GE+LE E+G V V Q A +S ++V+AYEP+WAIGTGK AT AQ + +R + + VA R+ YGGSV N E A PDVDG LVGGASL+ E +D +K Sbjct: 9 GNWKMNKNPEEAKAFIEAVASKLPSSELVEAGIAAPALTLSTVLEAAKGSELKIAAQNSYFENSGAFTGENSPKVLAEMGTDYVVIGHSERRDYFHETDQDINKKAKAIFANGLTPIICCGESLETYEAGKAVEFVGAQVSAALAGLSEEQVSSLVIAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQAVADKVRVQYGGSVKPENVAEYMACPDVDGALVGGASLEAESFLALLDFVK 252
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_SILST (Triosephosphate isomerase OS=Silicibacter sp. (strain TM1040) GN=tpiA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.068e-34 Identity = 91/230 (39.57%), Postives = 120/230 (52.17%), Query Frame = -2 Query: 273 GNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXVKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 962 GNWK NGT E + ++ L Q + ++ D + Q+C + GA TG++SA+ML + +VI+GHSERRA E + V K A + GL + C+GETLE+RE+G+T+ VV Q +N V+AYEPVWAIGTGKV T Q EVH LR L A ++YGGSV N E+ +VDG LVGGASLK Sbjct: 8 GNWKMNGTGEHLAEL-ENLAQGDLPEGVDVLICPPATLISRAADRA---GDIAIGGQDCHAKTSGAHTGDLSADMLRDAGATYVIIGHSERRADHGEGDADVRAKTEAAQAAGLVAVVCIGETLEEREAGTTLEVVGAQLAGSLPDGVTAENTVVAYEPVWAIGTGKVPTLDQIAEVHDALRADLVARFGA-AGKDLPLLYGGSVKPGNAAEIFGVSNVDGALVGGASLK 232
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_RUBXD (Triosephosphate isomerase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=tpiA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.068e-34 Identity = 81/188 (43.09%), Postives = 117/188 (62.23%), Query Frame = -2 Query: 243 AQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKI--SNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 797 AQN + GA+TGEVSA ML+++ I+GHSERR L E+++ V K A+ GL + CVGET E+R++G V+ Q +A+ E + ++ VV AYEP+WAIGTGK A+P AQ+ +R L++ A R++YGGS+ N E+ AQ DVDG LVGGASL+ F+ ++++A Sbjct: 67 AQNFFYEDSGAYTGEVSAPMLLDVGARASIVGHSERRELFCETDESVARKARRAVEAGLLPVVCVGETEEERDAGRMWEKVSGQVRAVVEGLGDASGGRVVFAYEPIWAIGTGKTASPEDAQDAIGRIRGLLRELRGEGFAEEARLLYGGSIKPENISEIMAQKDVDGGLVGGASLEVGSFLQLVEAA 254
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_POLSQ (Triosephosphate isomerase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=tpiA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.068e-34 Identity = 90/238 (37.82%), Postives = 124/238 (52.10%), Query Frame = -2 Query: 267 GNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXVKSVLRSDFHVA-----AQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQ-TKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 962 GNWK NG + V T+ + S L + +A AQ+ GA+TGEV A ML + +VI+GHSERR + E+++ V K AL G+ + CVGET ++R SG +V Q K ++ + ++AYEPVWAIGTGKVA+ AQ++H +R L + +VA+ I+YGGSV N EL A PD+DG LVGGASL P+ Sbjct: 8 GNWKMNGNLASNQDWVKTVARGMESGMPAGRKFAVCPSFPYLSQCSTLIKEHSLAFLSLGAQDVSAHGAGAYTGEVGASMLKEMGCEYVIVGHSERRQMHQEADESVAAKALQALDSGMTPVICVGETADERNSGRAEEIVCSQVAKQVSVLQDRLADCLIAYEPVWAIGTGKVASAQVAQDMHRAIRMQLAE-FDEDVASHVGILYGGSVKPDNAVELFAMPDIDGGLVGGASLNPQ 244
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_HYPNA (Triosephosphate isomerase OS=Hyphomonas neptunium (strain ATCC 15444) GN=tpiA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.068e-34 Identity = 86/241 (35.68%), Postives = 126/241 (52.28%), Query Frame = -2 Query: 243 GNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXVKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 962 GNWK NG + ++ + S + + C + GA TG+++AEML + +VI+GHSERRA E++ V + + AL G+ I CVGETL+QR++G + V+ Q + + +V+AYEPVWAIGTG+VAT Q EVH +R L + +TRI+YGGS+N N E+ A +V+G L+GGASLK +F+ I + A Sbjct: 8 GNWKMNGLMANLAEVERVAAEVPASSEGAETLLCLPATLIHAGSAKSEGSGLKIGGETCHANEKGAHTGDLAAEMLKDAGASYVIVGHSERRADHGETDAVVAAQASAALRAGITPIICVGETLDQRDAGEVLTVITTQMAESIPEGAEAAAIVIAYEPVWAIGTGRVATSEQIAEVHTSIRNLLVRRF-GDAGRTTRILYGGSMNPGNAAEILAVAEVNGGLIGGASLKAADFLAIYRLA 247 The following BLAST results are available for this feature:
BLAST of CV884627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884627 ID=CV884627; Name=CV884627; organism=Citrus sinensis; type=EST; length=963bpback to top |