CV884627
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_SYNJB (Triosephosphate isomerase OS=Synechococcus sp. GN=tpiA PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.395e-34 Identity = 93/243 (38.27%), Postives = 127/243 (52.26%), Query Frame = -2 Query: 252 GNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXVKSVLR-----SDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP-EFIDII 962 GNWK + T E ++ + L A +V+ SD V AQN GAFTGE+S ML L + +VI+GHSERR E+++ V ++A A GL I CVGE+ +QRE G T + + Q + I + +N+V+AYEP+WAIGTG+ +A V +R+ L + A I+YGGSV N EL AQP++DG LVGGASL P EF I+ Sbjct: 8 GNWKMHKTQAEAREFLRELGLALRSSPSGSASQRQIILCVPFTDLAVVAEQSRGSDIAVGAQNLHWEDQGAFTGEISGPMLAELGVRYVIVGHSERRQYFGETDETVNRRLAAAQRHGLTPILCVGESQQQREQGLTESWIVGQLDRALQGI-DLENLVIAYEPIWAIGTGQTCAAQEANRVIGLIRQHLGN-------AQLPILYGGSVKAGNIDELMAQPEIDGVLVGGASLDPQEFARIV 242
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_BRASO (Triosephosphate isomerase OS=Bradyrhizobium sp. (strain ORS278) GN=tpiA PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.395e-34 Identity = 94/240 (39.17%), Postives = 126/240 (52.50%), Query Frame = -2 Query: 249 GNWKCNGTSEEVKKIVSTL-NQAEXXXXXXXXXXXXXXXXXXXXVKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIK 962 GNWK NG + + L AE K+ V AQ+C + GA TG++SAEML + VI+GHSERRA ES+ V K A GL I CVGET +QR++G T+ ++ Q + S DN+++AYEPVWAIGTG T +++H+ +R+ L E A RI+YGGSV +N EL A +V+G LVGGASLK +F+ I K Sbjct: 11 GNWKMNGLKASAAEFEAMLAGAAEVTGKADLLVCPPATLLAAFAEKTRGGKAVAVGAQDCHAKASGAHTGDISAEMLADAGASAVIVGHSERRADHGESDVVVHQKAEAAWRAGLVAIVCVGETQQQRDAGLTLEILRGQLTLSLPEGSRADNLIVAYEPVWAIGTGLTPTAGDVEQIHSFIRQLLIVRFK-EQGARMRILYGGSVKPSNAAELMAVANVNGALVGGASLKAADFLAIAK 249
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_MYCGI (Triosephosphate isomerase OS=Mycobacterium gilvum (strain PYR-GCK) GN=tpiA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.822e-34 Identity = 84/182 (46.15%), Postives = 108/182 (59.34%), Query Frame = -2 Query: 267 AQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAI-----AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 797 AQ+ GA+TGE+S L L + ++GHSERR E+++ V K AL GL I C+GE LE RE+G+ V + AE+I+ V+AYEPVWAIGTG+VA+ A AQEV +R L + SA+VAA R++YGGSVN N E+ Q DVDG LVGGASL E Sbjct: 68 AQDVSQHDSGAYTGEISGAFLAKLGCTFAVVGHSERRTYHGETDELVAAKATAALKHGLTPIVCIGEQLEVREAGNHVEFNVNSLRGSLAGLSAEQIAQ---TVIAYEPVWAIGTGRVASAADAQEVCKAIRDELGNLASADVAAGVRVLYGGSVNAKNVGEIVGQGDVDGALVGGASLDGE 246
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_BORDL (Triosephosphate isomerase OS=Borrelia duttonii (strain Ly) GN=tpiA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.822e-34 Identity = 84/188 (44.68%), Postives = 113/188 (60.11%), Query Frame = -2 Query: 252 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLK-VIACVGETLEQRESGSTVAVVAEQTKAIAEKI--SNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDII 803 + AQN GA T E++ ML+ + +VILGHSE R L E+++ + KV L K +I CVGETLE+RE G T+ VV Q + + S+ ++LAYEPVWAIGTGK AT +AQEVH +R ++ S A + I YGGSVN N + L + D+DG L+GGASLK + F+ II Sbjct: 62 LGAQNMSYENSGARTSEIAPSMLLEFGVDYVILGHSECRTYLGENDEIINKKVLTGLKHPFKYLILCVGETLEEREKGKTLDVVLNQVRNGLASVYESDLQRIILAYEPVWAIGTGKTATKEEAQEVHKAIRLEIQSLYSKSAADNIIIQYGGSVNVDNVEGLMGENDIDGALIGGASLKADSFLKII 249
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_PROAC (Triosephosphate isomerase OS=Propionibacterium acnes GN=tpiA PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 3.108e-34 Identity = 83/177 (46.89%), Postives = 106/177 (59.89%), Query Frame = -2 Query: 273 AQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKI--SNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 797 AQ+ GA+TGEVS ML L +V++GHSERR NES++ V K + G+ I C GE LE R++G V Q KA + I +V+AYEP+WAIGTG+ AT AQEV +R+ +K+ A A + RI YGGSV AN E+ A+PDVDG LVGGASLK Sbjct: 70 AQDISAHDDGAYTGEVSGAMLSKLGCRYVVVGHSERREYHNESDELVNAKAKKVIENGMTPIICCGEALEVRKAGKHVEHTVGQIKADLDGIPAEQVAKLVIAYEPIWAIGTGETATADDAQEVCQAIREAVKELYDAPTAEAVRIQYGGSVKPANVAEIMAKPDVDGALVGGASLK 246
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_MYCVP (Triosephosphate isomerase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 3.108e-34 Identity = 82/186 (44.09%), Postives = 107/186 (57.53%), Query Frame = -2 Query: 246 AQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 797 AQ+ GA+TGE+S L L + ++GHSERR NE + V K A A GL I C+GE L+ RE+G+ V Q + +S V+AYEPVWAIGTG+VA+ A AQEV +R L + S E+AA R++YGGSVN N E+ Q DVDG LVGGASL E ++ + Sbjct: 68 AQDVSQHDSGAYTGEISGAFLAKLGCTFAVVGHSERRTYHNEDDALVAAKAAAAFKHGLTPIICIGEHLDVREAGNHVEYNVNQLRGSLAGLSAEQIGQAVIAYEPVWAIGTGRVASAADAQEVCKAIRDELGNLASPELAAGVRVLYGGSVNAKNVGEIVGQADVDGALVGGASLDGEQFSMLSA 253
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_MYCH7 (Triosephosphate isomerase OS=Mycoplasma hyopneumoniae (strain 7448) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 3.108e-34 Identity = 89/236 (37.71%), Postives = 124/236 (52.54%), Query Frame = -2 Query: 267 GNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXVKSV----LRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 962 GNWK N T E + + + S+ L +AAQN GAFTGE+S +ML +L +VI+GHSERR + E ++ + +K+ A L + CVGE+L + E+G T V+ Q AI + + N+ ++AYEP+WAIGTGK AT A A++V +K+N + T +IYGGSVN N EL +Q +DG LVGGASL PE Sbjct: 7 GNWKMNKTVSETRDFIQKFDIFYQENVGKIKEDLDFAIAPSFISLSLISKSLTKKLEIAAQNLSQFDSGAFTGEISGKMLQDLGTKYVIIGHSERREIFKEKDEELKNKILQAQKYDLIPVFCVGESLLEFEAGLTKKVIISQINAI-KSVLNFQKAIIAYEPIWAIGTGKTATAAIAEKVCG----MIKENFGKD----TTVIYGGSVNSKNINELVSQKSIDGALVGGASLDPE 233
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_STRAW (Triosephosphate isomerase OS=Streptomyces avermitilis GN=tpiA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 4.059e-34 Identity = 84/186 (45.16%), Postives = 110/186 (59.14%), Query Frame = -2 Query: 249 AQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKI--SNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDIIK 797 AQ+ GA+TGE+S ML L +V +GHSERR +E+++ V KV + GL I CVGE LE RE+G+ V Q + + + + +V+AYEPVWAIGTGKV AQEV A +R L + S E+A RI YGGSV N E+ A+PD+DG LVGGASL EF+ I + Sbjct: 69 AQDVSAHDSGAYTGEISGSMLAKLKCTYVAVGHSERRQYHHETDEIVNAKVKASFRHGLIPILCVGEELEVREAGNHVTHTLTQVEGGLKDVPAEQAETIVIAYEPVWAIGTGKVCGADDAQEVCAAIRAKLAELYSQELADQVRIQYGGSVKSGNVAEIMAKPDIDGALVGGASLDADEFVKIAR 254
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_BORRA (Triosephosphate isomerase OS=Borrelia recurrentis (strain A1) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 4.059e-34 Identity = 83/188 (44.15%), Postives = 113/188 (60.11%), Query Frame = -2 Query: 252 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLK-VIACVGETLEQRESGSTVAVVAEQTKAIAEKI--SNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDII 803 + AQN GA T E++ ML+ + +VILGHSE R L E+++ + KV L K +I CVGETLE+RE G T+ VV Q + + S+ ++LAYEPVWAIGTGK AT +AQEVH +R ++ S A + I YGGSVN N + L + D+DG L+GG+SLK + F+ II Sbjct: 62 LGAQNMSYENSGARTSEIAPSMLLEFGVDYVILGHSECRTYLGENDEIINKKVLTGLKHPFKYLILCVGETLEEREKGKTLDVVLNQVRNGLASVYESDLQRIILAYEPVWAIGTGKTATKEEAQEVHKAIRLEIQSLYSKSAADNIIIQYGGSVNVDNVEGLMGENDIDGALIGGSSLKADSFLKII 249
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_AMOA5 (Triosephosphate isomerase OS=Amoebophilus asiaticus (strain 5a2) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 4.059e-34 Identity = 89/247 (36.03%), Postives = 129/247 (52.23%), Query Frame = -2 Query: 246 NWKCNGTSEE---VKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXVKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKI-----SNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKS 959 NWK N +E + K ++ QAE H+ AQNC + GAFTGEVSA ML ++ + +V++GHSERR E ND + K+ LS L+ + C GE L RES A + +Q IAE + V++AYEP+WAIGTG + + A+ +E+ +R LK + +A + I+YGGS N +N +L + P ++G L+GGASL EFI I++S Sbjct: 9 NWKMNKNFQEGLQLAKEITQFIQAEPLAGAQIILFPSFIHLEGISKLLTPEVKLHLGAQNCHDQIAGAFTGEVSAAMLASIDVRYVLVGHSERRQNFAEDNDLIAKKIDAILSCKLQPVFCCGEPLSVRESNQHYAFIEQQ---IAESLFHLTPDELQQVIIAYEPIWAIGTGLIPSLAEIEEMQQTIRNILKKQYNTVLADNMAILYGGSCNASNITKLISLPGINGVLIGGASLHFKEFIHILRS 252 The following BLAST results are available for this feature:
BLAST of CV884627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884627 ID=CV884627; Name=CV884627; organism=Citrus sinensis; type=EST; length=963bpback to top |