CV884627
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_SYNJA (Triosephosphate isomerase OS=Synechococcus sp. (strain JA-3-3Ab) GN=tpiA PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 1.181e-33 Identity = 94/243 (38.68%), Postives = 124/243 (51.03%), Query Frame = -2 Query: 252 GNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXVKSVL-----RSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP-EFIDII 962 GNWK + T E ++ + A +V+ S V AQN GAFTGE+S ML L + +VI+GHSERR E+++ V ++A A GL I CVGE+L+QRE G T + + Q I + N+V+AYEP+WAIGTGK A+A V +R+ L A I+YGGSV +N EL AQP +DG LVGGASL P EF I+ Sbjct: 8 GNWKMHKTQAEARQFLREFRPALQASSAGVRPQRQIILCVPFTDLAVVVEETRGSGMAVGAQNLHWEDQGAFTGEISGPMLAELGVRYVIVGHSERRQYFGETDETVNRRLAAAQRHGLTPILCVGESLQQREQGLTESWIVGQLDRALPGI-DLRNLVIAYEPIWAIGTGKTCAAAEANRVIGLIRQHLG-------ADHLPILYGGSVKASNIDELMAQPQIDGVLVGGASLDPQEFARIV 242
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_PEDPA (Triosephosphate isomerase OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=tpiA PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 1.181e-33 Identity = 91/243 (37.45%), Postives = 127/243 (52.26%), Query Frame = -2 Query: 252 GNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXVKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQ-TKAI----AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDII 962 GNWK N +E ++ + + V AA+N + GAFTGE S + L + + +V++GHSERR E+++ + K + + I C GETLEQRE+G T VA Q T A+ AE+++ V+AYEP+WAIGTGK A+ QAQEV +R+ + VA RI YGGSV AN EL + D+DG LVGGASL PE F++++ Sbjct: 8 GNWKMNKNPQETQEFLDAIKGKLPDASVVESVIAAPAIDLSTLVAFSKDEQLKTAAENSYFEDEGAFTGETSPKALNEMGVNYVVIGHSERRQYFGETDEDINKKAKAIFNNNMTPIICCGETLEQREAGETNEWVAGQITNALKDLTAEQVAA---SVIAYEPIWAIGTGKTASSDQAQEVCHVIRETVAKLYDQTVADKVRIQYGGSVKPANIAELMGKEDIDGGLVGGASLDPESFLELV 247
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_BRASB (Triosephosphate isomerase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=tpiA PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 1.181e-33 Identity = 92/240 (38.33%), Postives = 124/240 (51.67%), Query Frame = -2 Query: 249 GNWKCNGTSEEVKKIVSTL-NQAEXXXXXXXXXXXXXXXXXXXXVKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIK 962 GNWK NG + + L AE K+ V AQ+C + GA TG++SAEML + +I+GHSERRA ES+ V K GL I CVGET +QR++G T+ ++ Q + S N+ +AYEPVWAIGTG T +++HA +R L + + E A RI+YGGSV +N EL A +V+G LVGGASLK +F+ I K Sbjct: 11 GNWKMNGLKASTAEFEAMLAGAAEVTGKADLLVCPPATLLAGFADKARGTRAVAVGAQDCHAKASGAHTGDLSAEMLADAGASAIIVGHSERRADHGESDVVVHQKTEAVWRAGLVAIVCVGETQQQRDAGQTLDILRGQLNLSLPQGSTAANLTVAYEPVWAIGTGLTPTAKDVEQIHAFIRTLLIERFNGE-GARMRILYGGSVKPSNAAELMAVANVNGALVGGASLKAADFLAIAK 249
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_BORHD (Triosephosphate isomerase OS=Borrelia hermsii (strain DAH) GN=tpiA PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 1.181e-33 Identity = 92/245 (37.55%), Postives = 127/245 (51.84%), Query Frame = -2 Query: 252 GNWKCNGTSEEV----KKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXVKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLK-VIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDII 962 GNWK + TS E K+IV + K S+ + AQN GA T E+S ML+ + +VILGHSE R L ++++ + K+ L K +I C+GETL +RE+ T+ VV Q + +S D ++LAYEPVWAIGTGK AT +AQEVH +R ++ S A I YGGSVN N L + D+DG L+GGASLK + F++I+ Sbjct: 8 GNWKMHYTSVEAAGVAKQIVDGVQNINDDVVIMITPAFTSLCKVCEVTKG---SNVLLGAQNMSYENSGARTSEISPSMLLEFGVDYVILGHSECRTYLGDTDEVINKKILAGLKHPFKYLILCIGETLSERENNKTLDVVLNQIRRGLMSVSESDLKRIILAYEPVWAIGTGKTATKEEAQEVHRAIRLEIESLYSTSAADDIIIQYGGSVNVDNVGGLMGENDIDGALIGGASLKADSFLNIV 249
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS1_RHIME (Triosephosphate isomerase 1 OS=Rhizobium meliloti GN=tpiA1 PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 1.181e-33 Identity = 88/233 (37.77%), Postives = 120/233 (51.50%), Query Frame = -2 Query: 267 GNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXVKSVLR-SDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 962 GNWK NGT + +I + + ++ S + AQ+C ++ GA TGEVSAEM+ + VI+GHSERR E + V K A L I CVGET E+R++G T+ ++ Q + +N V+AYEPVWAIGTG T + +E HA +R+ L AE RI+YGGSV +N KEL +VDG L+GGASLK + Sbjct: 11 GNWKMNGTRASLDQIKAMAEGVKGDLSARVDALICPPATLLYVATALCDDSPLMIGAQDCHQKQSGAHTGEVSAEMVADCFGTHVIVGHSERRTDHGEGDALVRAKTEAAHGADLVAIVCVGETEEERKAGRTLDILKRQLSESLPDQATAENTVIAYEPVWAIGTGLTPTVSDVEEAHAFMRRELVSRFGAE-GGKMRILYGGSVKPSNAKELMGVANVDGALIGGASLKAD 242
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_MYCCT (Triosephosphate isomerase OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) GN=tpiA PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 2.015e-33 Identity = 88/234 (37.61%), Postives = 122/234 (52.14%), Query Frame = -2 Query: 276 GNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXVKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNV--VLAYEPVWAIGTGKVATPAQAQEVHAELRKWLK---DNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 962 GNWK NGT+ K + L Q + L + +AAQN GA+TGE+S ML + + +VI+GHSERR + E++ + K L + I C GE+LE +E G T+ V Q I + IS D + ++AYEP+WAIGTGK A A+EV ++R+ L DN++AE I YGGSV +N +E P++DG LVGGASL Sbjct: 8 GNWKMNGTN---KSLEDFLYQVDNKVNNSKITAGLAVPYVMLQTGIKLAKNVKIAAQNVHFELKGAYTGEISVSMLKEIGVEYVIIGHSERREMFFETDLDINKKAKILLENNMIPIICCGESLETKEQGKTIEFVNNQINLIYQNISKQDAIKTIIAYEPIWAIGTGKTANSLDAEEVCKKIRENLAKIYDNLTAE---KITIQYGGSVKPSNIQEYLKMPNIDGALVGGASL 235
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_SYNR3 (Triosephosphate isomerase OS=Synechococcus sp. (strain RCC307) GN=tpiA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.631e-33 Identity = 86/233 (36.91%), Postives = 122/233 (52.36%), Query Frame = -2 Query: 267 GNWKCNGTSEEVKKIVST-LNQAEXXXXXXXXXXXXXXXXXXXXVKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 962 GNWK + T + K+ + L Q +++ SD +A+QN + GAFTGE+SAEML+ L + + I+GHSE R +ES++ + + + + GL I CVGE+ EQR S T V+ Q + E I +V+AYEP+WAIGTGK +A V +R W+ + I YGGSV N EL A+ D+DG LVGGASL+P+ Sbjct: 12 GNWKMHMTCAQAKQYAAAFLPQVANAPKDRSIVLAPPFTAISTLQEALAGSDVQIASQNVHWKDSGAFTGEISAEMLLELGVGYTIVGHSEPRKYFSESDEQINQRARASQAAGLIPILCVGESDEQRSSNETERVIRRQVEQGLEGIDP-SKLVVAYEPIWAIGTGKTCESEEANRVCGLIRNWVG-------YPNLTIQYGGSVKPGNIDELMAKSDIDGVLVGGASLEPD 236
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_MORSP (Triosephosphate isomerase OS=Moraxella sp. GN=tpiA PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 3.436e-33 Identity = 79/184 (42.93%), Postives = 109/184 (59.24%), Query Frame = -2 Query: 243 GAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNW--------DNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSA 770 GA+TGE SA+ +V+ W ILGHSERR ESND + K+ +ALSQ L V+ C+GE+ EQ ++ T+ V+ Q I E I+ +++AYEPVWAIGTGKV T A+ H +++ L A+ ++ ++YGGSVN N AA P +DG LVGGASLK + I +A Sbjct: 82 GAYTGECSAQQIVDAGATWTILGHSERRQYHQESNDALLQKMIHALSQDLGVVFCIGESQEQYDTKQTLTVIDNQLVVIKEFITQQPELIDALPTRLIIAYEPVWAIGTGKVPTVAEVSATHKHIKQTLAG--FADSLSNMTVLYGGSVNADNANSFAADPMIDGALVGGASLKADSFLTIATA 263
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_ENTFA (Triosephosphate isomerase OS=Enterococcus faecalis GN=tpiA PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 3.436e-33 Identity = 84/234 (35.90%), Postives = 120/234 (51.28%), Query Frame = -2 Query: 267 GNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXVKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 962 GNWK N T E + + A ++ S+ +AAQNC+ GAFTGE S + +L + +VI+GHSERR +E+++ + K + G+ I C GETLE E+G T + Q +SN ++V+AYEP+WAIGTGK A A E+ +R ++ EV+ + RI YGGSV N E A+ +VDG LVGGASL+ + Sbjct: 8 GNWKMNKTLSEAQSFAEAVKNAVPSNDVVDAVIGSPALFLAPLAWNLKDSEVKLAAQNCYWENAGAFTGENSPAAIADLGVDYVIIGHSERREYFHETDEDINKKAKAIFANGMTPIFCCGETLETYEAGKTAEWIEGQITKGLVGLSNEQVASMVIAYEPIWAIGTGKSADANIADEICGVVRSTVEKLYGKEVSEAVRIQYGGSVKPENIAEYMAKENVDGALVGGASLEAD 241
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_MYCLE (Triosephosphate isomerase OS=Mycobacterium leprae GN=tpiA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 5.862e-33 Identity = 79/167 (47.31%), Postives = 102/167 (61.08%), Query Frame = -2 Query: 276 GAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 770 GA+TG++S L L +V++GHSERR +E + V K A AL L I C+GE LE RE G V+ Q + +S NVV+ YEPVWAIGTG+VA+ A AQEV +RK L S +VA + R++YGGS+N N ++ AQ DVDG LVGGASL Sbjct: 77 GAYTGDISGAFLAKLGCSFVLVGHSERRTYHDEGDALVAAKTAAALKNSLTPIVCIGEYLEIREVGEHVSHCQNQLRGSLAGLSPEQIGNVVIVYEPVWAIGTGRVASAADAQEVCEAIRKELGALASPQVAETVRVLYGGSLNAKNIGDIVAQQDVDGGLVGGASL 243 The following BLAST results are available for this feature:
BLAST of CV884627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884627 ID=CV884627; Name=CV884627; organism=Citrus sinensis; type=EST; length=963bpback to top |