CV884627
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_SALNS (Triosephosphate isomerase OS=Salmonella newport (strain SL254) GN=tpiA PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 1.139e-44 Identity = 104/250 (41.60%), Postives = 144/250 (57.60%), Query Frame = -2 Query: 231 GNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXVKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAI--AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVS---AEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSATVKK 962 GNWK NG+ V ++V+ L + ++ S + AQN + GAFTGE SAEML ++ ++I+GHSERR ES++ + K A QGL + C+GET + E+G T V A Q A+ + + ++ V+AYEPVWAIGTGK ATPAQAQ VH K+++D+++ A++A I YGGSVN +N EL AQPD+DG LVGGASLK + F I+K+A K Sbjct: 8 GNWKLNGSRHMVNELVANLRKELTGVAGCDVAIAPPEMYIDLAKRAAAGSHIMLGAQNVDLNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVH----KFIRDHIAKADAKIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAEAAK 253
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_SALHS (Triosephosphate isomerase OS=Salmonella heidelberg (strain SL476) GN=tpiA PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 1.139e-44 Identity = 104/250 (41.60%), Postives = 144/250 (57.60%), Query Frame = -2 Query: 231 GNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXVKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAI--AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVS---AEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSATVKK 962 GNWK NG+ V ++V+ L + ++ S + AQN + GAFTGE SAEML ++ ++I+GHSERR ES++ + K A QGL + C+GET + E+G T V A Q A+ + + ++ V+AYEPVWAIGTGK ATPAQAQ VH K+++D+++ A++A I YGGSVN +N EL AQPD+DG LVGGASLK + F I+K+A K Sbjct: 8 GNWKLNGSRHMVNELVANLRKELTGVAGCDVAIAPPEMYIDLAKRAAAGSHIMLGAQNVDLNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVH----KFIRDHIAKADAKIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAEAAK 253
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_SALG2 (Triosephosphate isomerase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=tpiA PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 1.139e-44 Identity = 104/250 (41.60%), Postives = 144/250 (57.60%), Query Frame = -2 Query: 231 GNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXVKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAI--AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVS---AEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSATVKK 962 GNWK NG+ V ++V+ L + ++ S + AQN + GAFTGE SAEML ++ ++I+GHSERR ES++ + K A QGL + C+GET + E+G T V A Q A+ + + ++ V+AYEPVWAIGTGK ATPAQAQ VH K+++D+++ A++A I YGGSVN +N EL AQPD+DG LVGGASLK + F I+K+A K Sbjct: 8 GNWKLNGSRHMVNELVANLRKELAGVAGCDVAIAPPEMYIDLAKRAAAGSHIMLGAQNVDLNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVH----KFIRDHIAKADAKIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAEAAK 253
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_SALEP (Triosephosphate isomerase OS=Salmonella enteritidis PT4 (strain P125109) GN=tpiA PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 1.139e-44 Identity = 104/250 (41.60%), Postives = 144/250 (57.60%), Query Frame = -2 Query: 231 GNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXVKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAI--AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVS---AEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSATVKK 962 GNWK NG+ V ++V+ L + ++ S + AQN + GAFTGE SAEML ++ ++I+GHSERR ES++ + K A QGL + C+GET + E+G T V A Q A+ + + ++ V+AYEPVWAIGTGK ATPAQAQ VH K+++D+++ A++A I YGGSVN +N EL AQPD+DG LVGGASLK + F I+K+A K Sbjct: 8 GNWKLNGSRHMVNELVANLRKELAGVAGCDVAIAPPEMYIDLAKRAAAGSHIMLGAQNVDLNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVH----KFIRDHIAKADAKIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAEAAK 253
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_SALDC (Triosephosphate isomerase OS=Salmonella dublin (strain CT_02021853) GN=tpiA PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 1.139e-44 Identity = 104/250 (41.60%), Postives = 144/250 (57.60%), Query Frame = -2 Query: 231 GNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXVKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAI--AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVS---AEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSATVKK 962 GNWK NG+ V ++V+ L + ++ S + AQN + GAFTGE SAEML ++ ++I+GHSERR ES++ + K A QGL + C+GET + E+G T V A Q A+ + + ++ V+AYEPVWAIGTGK ATPAQAQ VH K+++D+++ A++A I YGGSVN +N EL AQPD+DG LVGGASLK + F I+K+A K Sbjct: 8 GNWKLNGSRHMVNELVANLRKELAGVAGCDVAIAPPEMYIDLAKRAAAGSHIMLGAQNVDLNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVH----KFIRDHIAKADAKIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAEAAK 253
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_SALCH (Triosephosphate isomerase OS=Salmonella choleraesuis GN=tpiA PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 1.139e-44 Identity = 104/250 (41.60%), Postives = 144/250 (57.60%), Query Frame = -2 Query: 231 GNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXVKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAI--AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVS---AEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSATVKK 962 GNWK NG+ V ++V+ L + ++ S + AQN + GAFTGE SAEML ++ ++I+GHSERR ES++ + K A QGL + C+GET + E+G T V A Q A+ + + ++ V+AYEPVWAIGTGK ATPAQAQ VH K+++D+++ A++A I YGGSVN +N EL AQPD+DG LVGGASLK + F I+K+A K Sbjct: 8 GNWKLNGSRHMVNELVANLRKELTGVAGCDVAIAPPEMYIDLAKRAAAGSHIMLGAQNVDLNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVH----KFIRDHIAKADAKIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAEAAK 253
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_SALA4 (Triosephosphate isomerase OS=Salmonella agona (strain SL483) GN=tpiA PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 1.139e-44 Identity = 104/250 (41.60%), Postives = 144/250 (57.60%), Query Frame = -2 Query: 231 GNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXVKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAI--AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVS---AEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSATVKK 962 GNWK NG+ V ++V+ L + ++ S + AQN + GAFTGE SAEML ++ ++I+GHSERR ES++ + K A QGL + C+GET + E+G T V A Q A+ + + ++ V+AYEPVWAIGTGK ATPAQAQ VH K+++D+++ A++A I YGGSVN +N EL AQPD+DG LVGGASLK + F I+K+A K Sbjct: 8 GNWKLNGSRHMVNELVANLRKELTGVAGCDVAIAPPEMYIDLAKRAAAGSHIMLGAQNVDLNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVH----KFIRDHIAKADAKIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAEAAK 253
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_JANMA (Triosephosphate isomerase OS=Janthinobacterium sp. (strain Marseille) GN=tpiA PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 1.139e-44 Identity = 99/190 (52.11%), Postives = 127/190 (66.84%), Query Frame = -2 Query: 243 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 803 + AQ+ + GA+TGEVS ML +VI+GHSERRA E+N+ + K AL+ GL I CVGETL+QRE+G T +VVAEQ + I+ D +V+AYEPVWAIGTGK ATPA AQEVHA LRK L+ +AE A RI+YGGS+ N KEL A D+DG L+GGA+LK +F+ I+ +A Sbjct: 60 LGAQDVSSHEAGAYTGEVSTSMLQEFDCRYVIVGHSERRAYFAETNELIAQKTVRALNAGLTPIVCVGETLDQREAGQTDSVVAEQLNVVLASIAASDLAKIVVAYEPVWAIGTGKTATPAMAQEVHAMLRKQLQAK-NAEAAMQVRILYGGSMKPENAKELLAMSDIDGGLIGGAALKAADFLAIVHAA 248
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_ENT38 (Triosephosphate isomerase OS=Enterobacter sp. (strain 638) GN=tpiA PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 1.139e-44 Identity = 107/250 (42.80%), Postives = 143/250 (57.20%), Query Frame = -2 Query: 231 GNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXVKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAI--AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVS---AEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSATVKK 962 GNWK NG+ V ++++ L + + S + AQN V GAFTGE SAEML ++ ++I+GHSERR ES++ + K A QGL + C+GET + E+G T V A Q A+ + S ++ VV+AYEPVWAIGTGK ATPAQAQ VH K+++D+++ A+VA I YGGSVN AN EL QPD+DG LVGGASLK + F I+K+A K Sbjct: 8 GNWKLNGSRHMVNELIANLRKELAGVTGCAVAIAPPDIYLDLAKHAADGSHIVLGAQNVDVNLSGAFTGETSAEMLKDIGAKYIIIGHSERRTYHKESDELIAKKFAVLKEQGLIPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGASAFEGVVIAYEPVWAIGTGKSATPAQAQAVH----KFIRDHIAKADAKVAEQVIIQYGGSVNAANAAELFTQPDIDGALVGGASLKADAFAVIVKAAEAAK 253
BLAST of CV884627 vs. ExPASy Swiss-Prot
Match: TPIS_CHLPB (Triosephosphate isomerase OS=Chlorobium phaeobacteroides (strain BS1) GN=tpiA PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 1.139e-44 Identity = 104/242 (42.98%), Postives = 135/242 (55.79%), Query Frame = -2 Query: 243 GNWKCN-GTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXVKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 962 GNWK N +E V S L + + + SD + AQNC GA+TGEVS ML +L ++I+GHSERR E+N V ++ AL G++VI C+GETLE+RE+G T A+V Q + I + NVVLAYEPVWAIGTGK ATP QA VHA +R + D A RI YGGSV +N EL P++DG L+GGASLK +F+ I+ +A Sbjct: 8 GNWKMNKNVAEGVALASSILENLDGGKMACEVGIAPAYPVLSEVGRVIEGSDICLVAQNCHYEDEGAYTGEVSVRMLDSLGCSYIIVGHSERRQYFGETNRTVNLRLKKALEGGMRVILCIGETLEEREAGVTDAIVTAQVREGLADIEDLGNVVLAYEPVWAIGTGKTATPEQADAVHASIRATISDMYGEADAEDIRIQYGGSVKPSNAVELFGMPNIDGGLIGGASLKADDFVAIVNAA 249 The following BLAST results are available for this feature:
BLAST of CV884627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884627 ID=CV884627; Name=CV884627; organism=Citrus sinensis; type=EST; length=963bpback to top |