CV884626
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884626 vs. ExPASy Swiss-Prot
Match: TPIS_BDEBA (Triosephosphate isomerase OS=Bdellovibrio bacteriovorus GN=tpiA PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.610e-37 Identity = 88/195 (45.13%), Postives = 116/195 (59.49%), Query Frame = 2 Query: 224 KSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 808 +S+ + AQNC+ + GAFTGE SA+++ +L +V++GHSERRA+ E + V DKVA+ GL + C+GETL++RES T V+ Q K VV+AYEPVWAIGTGKVATP Q E H ++ LK A + I+YGGSV N L QP V+GFLVGGASL+ + I S Sbjct: 50 ESLKGTSIKFGAQNCYFQAQGAFTGENSAQVVKDLGGSYVLIGHSERRAIFGEGDALVADKVAFVQGLGLTPMLCIGETLQERESAKTFRVLETQLNLGLAKADKTKPVVVAYEPVWAIGTGKVATPEQVAETHTDVFNILK----ALGFETAPILYGGSVKPDNAAGLIKQPHVNGFLVGGASLEAKSFSEIAS 240
BLAST of CV884626 vs. ExPASy Swiss-Prot
Match: TPIS_XANP2 (Triosephosphate isomerase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=tpiA PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.714e-37 Identity = 97/252 (38.49%), Postives = 127/252 (50.40%), Query Frame = 2 Query: 71 ARKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLR-SDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSATVK 820 +R+ + GNWK NG + +I + + L S + QNC GA TG +SAEML + + VI+GHSERR L+ES+ V KV A GL I CVGET E+R++G V VV Q + N+V+AYEPVWAIGTG+ TP +H +R L+ AE A RI+YGGSV N L A DVDG LVGGASLK +F+ I ++ + Sbjct: 4 SRRVLIAGNWKMNGLKSSLAEIEALAAGYDGDLKAKLDLLVCPPATLLISAAERLAGSGVQLGGQNCHPAPAGAHTGGISAEMLKDAGVTSVIVGHSERRTNLSESDAVVMAKVKAAWCFGLLPIVCVGETAEERDAGEAVGVVTRQVHQSLPEGCTASNLVIAYEPVWAIGTGRTPTPEDVANIHGTIRSVLRSQFGAE-ADGIRILYGGSVKPDNAATLMAVADVDGALVGGASLKAADFLAIARATPAR 254
BLAST of CV884626 vs. ExPASy Swiss-Prot
Match: TPIS_THET8 (Triosephosphate isomerase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=tpiA PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.714e-37 Identity = 97/250 (38.80%), Postives = 132/250 (52.80%), Query Frame = 2 Query: 74 RKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVL-RSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 811 R+ V GNWK + T E + + L + K VL + AQ+ K GA+TGEVSA ML +L + I+GHSERR E++ V +K L +G+ I CVGE LE RE G V Q + E + + +V+AYEPVWAIGTGK ATP A+ +H +RK L + A+ RI+YGGSVN N +L + P+VDG LVGGASL+ E F+ +++ A Sbjct: 2 RRVLVAGNWKMHKTPSEARVWFAELKRL--LPPLQSEAAVLPAFPILPVAKEVLAETQVGYGAQDVSAHKEGAYTGEVSARMLSDLGCRYAIVGHSERRRYHGETDALVAEKAKRLLEEGITPILCVGEPLEVREKGEAVPYTLRQLRGSLEGVEPPGPEALVIAYEPVWAIGTGKNATPEDAEAMHQAIRKALSERYGEAFASRVRILYGGSVNPKNFADLLSMPNVDGGLVGGASLELESFLALLRIA 249
BLAST of CV884626 vs. ExPASy Swiss-Prot
Match: TPIS_MYCA9 (Triosephosphate isomerase OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=tpiA PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.714e-37 Identity = 99/246 (40.24%), Postives = 125/246 (50.81%), Query Frame = 2 Query: 68 MARKFFVGGNWKCNGTSEE----VKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 787 M+RK + GNWK N E V+KI +L + AQ+ V GA+TGEVS L L + +V++GHSERR E + V K A AL GL I C+GE L+ RE+G V + +S VV+AYEPVWAIGTG+VA+ A AQEV A +R L +A+VA S R++YGGS N N E+ AQ DVDG LVGGASL E Sbjct: 1 MSRKPLIAGNWKMNLNHFEAIALVQKIAFSLPDKYFDKVDVTVIPPFTDIRSVQTLVDGDKLRLTYGAQDLSVYDSGAYTGEVSGAFLAKLGVTYVVVGHSERRQYHGEDDALVAAKAAAALKHGLTPIVCIGEALDIREAGDHVQYNVNSLRGSLAGLSAEQVGKVVIAYEPVWAIGTGRVASAADAQEVCAAIRAELAQIANADVAGSVRVLYGGSANAKNVGEIVAQEDVDGALVGGASLDGE 246
BLAST of CV884626 vs. ExPASy Swiss-Prot
Match: TPIS_CLOBK (Triosephosphate isomerase OS=Clostridium botulinum (strain Okra / Type B1) GN=tpiA PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.714e-37 Identity = 93/238 (39.08%), Postives = 125/238 (52.52%), Query Frame = 2 Query: 74 RKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNW--DNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 781 R + GNWK N T +E ++V L + V S+ V AQN + GA+TGE++ +ML L + +VI+GHSERR NE+++ V KV A L I C GE+LE+RE T V+ Q K +++S + +V+AYEP+WAIGTGK AT QA E +R +KD VA RI YGGSV K A+ ++DG LVGGASLK Sbjct: 2 RTAIIAGNWKMNKTVKEAVELVKELKPL-VKDAKCDVVVCPTYVCLPAVLEEVKGSNIKVGAQNMHFEESGAYTGEIAPKMLEELGVHYVIIGHSERRQYFNETDETVNKKVKKAFEHNLIPIVCCGESLEEREGNITEKVLEGQIKVGLKELSKEQVEKLVIAYEPIWAIGTGKTATDEQANETIGYIRTVVKDMYGESVADKVRIQYGGSVKPGTIKAQMAKEEIDGALVGGASLK 238
BLAST of CV884626 vs. ExPASy Swiss-Prot
Match: TPIS_ANOFW (Triosephosphate isomerase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=tpiA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 6.157e-37 Identity = 91/248 (36.69%), Postives = 131/248 (52.82%), Query Frame = 2 Query: 74 RKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKS 808 RK + GNWK + T +E + V + ++ ++ + AQN GAFTGE+S L +L + +VI+GHSERR + E+++ V KV A GL I C GETLE+RES T VV Q + E ++ VV+AYEP+WAIGTGK +T A V +R+ + + S E A + RI YGGSV N A+ +DG LVGGASL+P+ F+ ++++ Sbjct: 2 RKPIIAGNWKMHKTLKEALQFVEEVKHEVPSNEQVDAVVCAPALFLAHLVEATKGTNVKIGAQNMHFEDQGAFTGEISPVALKDLGVEYVIIGHSERREMFAETDETVNKKVLAAFKHGLVPIVCCGETLEERESNRTNEVVRVQVEKALEGLTEEQVKQVVIAYEPIWAIGTGKSSTAEDANNVCGYIRQVIANKFSQEAANAVRIQYGGSVKPENIAAFLAEEHIDGALVGGASLQPQSFLQLVEA 249
BLAST of CV884626 vs. ExPASy Swiss-Prot
Match: TPIS_DESDG (Triosephosphate isomerase OS=Desulfovibrio desulfuricans (strain G20) GN=tpiA PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 8.041e-37 Identity = 85/187 (45.45%), Postives = 117/187 (62.57%), Query Frame = 2 Query: 245 FHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNW------DNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 787 F+ AQN + GA+TGE+S M+V+ W + GHSERR++L ES+ FVG K A+ L +GL V+ C+GETLE+RE G V+ Q ++E +S + + +AYEPVWAIGTGKVA A+ HA +R L++ + A A S RI+YGGSV N + + +VDG LVGGASL+ E Sbjct: 60 FYCGAQNVYPADEGAYTGEISPGMIVSTGAAWALTGHSERRSVLGESSAFVGQKTAFCLEKGLNVVLCIGETLEEREGGQLEKVLRGQ---LSEGLSGVPAGIAPERLAIAYEPVWAIGTGKVAGTAEIAATHAVVRGMLRELLPA-AADSMRILYGGSVKPDNAAAIISLDNVDGVLVGGASLQAE 242
BLAST of CV884626 vs. ExPASy Swiss-Prot
Match: TPIS_RALSO (Triosephosphate isomerase OS=Ralstonia solanacearum GN=tpiA PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.050e-36 Identity = 103/242 (42.56%), Postives = 128/242 (52.89%), Query Frame = 2 Query: 71 ARKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLR-SDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 787 AR V GNWK +G+ +++ + A +SVL S AQ+ GAFTGEV+A ML + I+GHSERR E++ V K AL G+ I CVGETL QRE+G T VVA Q +A+ E +S ++V+AYEPVWAIGTGK AT QAQ VHA LR + A VA I+YGGSV N EL D+DG L+GGASLK E Sbjct: 3 ARPKLVVGNWKLHGSLNGNAELLEKIKAA---GQTRAALAVCAPFPYLAQCQSVLAGSSVAWGAQDVSAETRGAFTGEVAASMLSEFGCGYAIVGHSERRTYHGETDAQVAIKALRALEHGITPIVCVGETLAQREAGETELVVARQLEAVLESLSVEQLGHIVVAYEPVWAIGTGKTATSEQAQAVHAFLRGRVA-ACDAGVAQRMPILYGGSVKPDNAAELFTMADIDGGLIGGASLKAE 240
BLAST of CV884626 vs. ExPASy Swiss-Prot
Match: TPIS_HERA2 (Triosephosphate isomerase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=tpiA PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.050e-36 Identity = 89/188 (47.34%), Postives = 112/188 (59.57%), Query Frame = 2 Query: 251 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIK 805 + AQN GA+TGE++ +ML L +VILGHSERR E++ + K AL+ GLK I CVGE +R+SG +VV Q + +S VV+AYEPVWAIGTG ATPA AQ +HA +R L A + I YGGSV N EL AQPD+DG LVGGASLK +FI I++ Sbjct: 61 LGAQNMHYEAKGAYTGEIAPQMLKELGCSYVILGHSERRQYFGETDALINRKAHAALANGLKPIVCVGEVKAERDSGQAESVVVGQLRGSLAGLSAEQLRGVVIAYEPVWAIGTGDTATPADAQAMHARIRAELAALSDQATADAVIIQYGGSVKPDNVDELMAQPDIDGALVGGASLKAADFIRIVR 248
BLAST of CV884626 vs. ExPASy Swiss-Prot
Match: TPIS_CUPTR (Triosephosphate isomerase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=tpiA PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.050e-36 Identity = 90/179 (50.28%), Postives = 108/179 (60.34%), Query Frame = 2 Query: 257 AQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAE--KISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 787 AQ+ GAFTGEV+A ML +V++GHSERR E++ V K AL G+ + CVGETL QRE+G T AVV Q +A+ E + VVLAYEPVWAIGTGK AT QAQ VHA LR + A VA I+YGGSV N EL + D+DG L+GGASLK E Sbjct: 62 AQDVSAEARGAFTGEVAASMLGEFGCTYVLVGHSERRTYHGETDQAVAAKALRALEFGIVPVVCVGETLAQREAGETEAVVGRQLQAVLEALTVEQLGRVVLAYEPVWAIGTGKTATSEQAQAVHAFLRGQVAAR-DAGVAGRMAILYGGSVKPDNAAELFSMTDIDGGLIGGASLKSE 239 The following BLAST results are available for this feature:
BLAST of CV884626 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884626 ID=CV884626; Name=CV884626; organism=Citrus sinensis; type=EST; length=909bpback to top |