CV884626
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884626 vs. ExPASy Swiss-Prot
Match: TPIS_RALEH (Triosephosphate isomerase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=tpiA PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 6.807e-36 Identity = 89/177 (50.28%), Postives = 107/177 (60.45%), Query Frame = 2 Query: 257 AQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAI--AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 781 AQ+ GAFTGEVSA M+ +V++GHSERR E++ V K AL G+ + CVGETL QRE+G T AVV Q +A+ A + VVLAYEPVWAIGTGK AT QAQ VHA LR + A VA I+YGGSV N EL + D+DG L+GGASLK Sbjct: 60 AQDVSAEARGAFTGEVSASMVGEFGCTYVLVGHSERRTYHGETDQTVAAKALRALEFGIVPVVCVGETLAQREAGETEAVVGRQLQAVLDALTVEQLSRVVLAYEPVWAIGTGKTATSEQAQAVHAFLRGQVAAR-DAGVAERMAILYGGSVKPDNAAELFSMTDIDGGLIGGASLK 235
BLAST of CV884626 vs. ExPASy Swiss-Prot
Match: TPIS_SILPO (Triosephosphate isomerase OS=Silicibacter pomeroyi GN=tpiA PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 8.891e-36 Identity = 99/248 (39.92%), Postives = 125/248 (50.40%), Query Frame = 2 Query: 74 RKFFVGGNWKCNGTSEEVKKI--VSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSA 811 R+ GNWK NGT + + ++ + A S +R + Q+C GA TG++SA ML + VILGHSERRA E++ V DK AL GL I C+GETL QRE+G T+ VV Q + VV+AYEPVWAIGTG V T Q EVH LR+ L +E A + R++YGGSV N E+ A +VDG LVGGASL I SA Sbjct: 2 RRKLAAGNWKMNGTGAALDALEAIAGAHSAAAVDLLICPPATLLYRAAQVAEGSRVR----IGGQDCHAVTAGAHTGDISAMMLADAGASAVILGHSERRADHGETDAQVCDKARAALEAGLIAIICIGETLAQREAGQTLDVVCAQLAGSVPDGIDGTRVVVAYEPVWAIGTGLVPTLEQIAEVHDTLRQQLIGRFGSETAEAIRLLYGGSVKPGNAAEIFAVSNVDGALVGGASLTAADFSPIVSA 245
BLAST of CV884626 vs. ExPASy Swiss-Prot
Match: TPIS_NATTJ (Triosephosphate isomerase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=tpiA PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 8.891e-36 Identity = 94/242 (38.84%), Postives = 133/242 (54.96%), Query Frame = 2 Query: 68 MARKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTK-AIAEKISN-WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 787 MAR + GNWK N E ++ V+ + + + + AQN + + GAFTGEVS +ML L + +VI+GHSERR + ES++ V KV AL G+K I CVGE+ QR G T+ VV Q K A++E +S+ NVV AYEPVWAIG+GK AT A++V +R + + +++ VA ++YGGSV N +E Q +++G LVGG SL E Sbjct: 1 MARTI-IAGNWKMNHGPRETREFVAGMKE-KYQTPPAVETVICPPFVSISDLVNESPEWLKTGAQNVYFEESGAFTGEVSPKMLAELGVEYVIIGHSERRNIFAESDEEVNKKVRIALKYGIKPIICVGESDAQRNEGKTLEVVENQVKSALSEVVSDTLQNVVFAYEPVWAIGSGKAATGEDAEQVCKHIRSVISE-LNSSVADDIPVLYGGSVKPENLEEFMDQDNINGALVGGKSLVAE 239
BLAST of CV884626 vs. ExPASy Swiss-Prot
Match: TPIS_GRABC (Triosephosphate isomerase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=tpiA PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.161e-35 Identity = 94/236 (39.83%), Postives = 121/236 (51.27%), Query Frame = 2 Query: 86 VGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLR-SDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTK-AIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 787 + GNWK NG + ++ L A SVL S V AQ+C + + GA TG++SAEMLV WVILGHSERR E ++ V +KV A GL I CVGET ++R SG +V Q K ++ + + N V+AYEPVWAIGTG+ AT +HA +R+ L E RI+YGGSV N L P+V G LVGGASL + Sbjct: 5 IAGNWKMNGLRSTSESLLQALRDAAPHALRNCDMLICPPATLIAQAASVLAGSGIEVGAQDCHMARSGAHTGDLSAEMLVEAGAHWVILGHSERRRDHGELSETVREKVIAARQFGLTPIVCVGETEDERASGRETEIVGWQIKGSLPDGFAADSNGVIAYEPVWAIGTGRTATVEDVAMMHAFIREELVRQF-GEAGRGVRILYGGSVKPENAASLLRVPEVGGALVGGASLSAQ 239
BLAST of CV884626 vs. ExPASy Swiss-Prot
Match: TPIS_BORHD (Triosephosphate isomerase OS=Borrelia hermsii (strain DAH) GN=tpiA PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.161e-35 Identity = 95/251 (37.85%), Postives = 131/251 (52.19%), Query Frame = 2 Query: 74 RKFFVGGNWKCNGTSEEV----KKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLK-VIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDII 802 RK F+ GNWK + TS E K+IV + K S+ + AQN GA T E+S ML+ + +VILGHSE R L ++++ + K+ L K +I C+GETL +RE+ T+ VV Q + +S D ++LAYEPVWAIGTGK AT +AQEVH +R ++ S A I YGGSVN N L + D+DG L+GGASLK + F++I+ Sbjct: 2 RKMFLAGNWKMHYTSVEAAGVAKQIVDGVQNINDDVVIMITPAFTSLCKVCEVTKG---SNVLLGAQNMSYENSGARTSEISPSMLLEFGVDYVILGHSECRTYLGDTDEVINKKILAGLKHPFKYLILCIGETLSERENNKTLDVVLNQIRRGLMSVSESDLKRIILAYEPVWAIGTGKTATKEEAQEVHRAIRLEIESLYSTSAADDIIIQYGGSVNVDNVGGLMGENDIDGALIGGASLKADSFLNIV 249
BLAST of CV884626 vs. ExPASy Swiss-Prot
Match: TPIS_SILST (Triosephosphate isomerase OS=Silicibacter sp. (strain TM1040) GN=tpiA PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.516e-35 Identity = 95/238 (39.92%), Postives = 124/238 (52.10%), Query Frame = 2 Query: 68 MARKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 781 MARK GNWK NGT E + ++ L Q + ++ D + Q+C + GA TG++SA+ML + +VI+GHSERRA E + V K A + GL + C+GETLE+RE+G+T+ VV Q +N V+AYEPVWAIGTGKV T Q EVH LR L A ++YGGSV N E+ +VDG LVGGASLK Sbjct: 1 MARKL-AAGNWKMNGTGEHLAEL-ENLAQGDLPEGVDVLICPPATLISRAADRA---GDIAIGGQDCHAKTSGAHTGDLSADMLRDAGATYVIIGHSERRADHGEGDADVRAKTEAAQAAGLVAVVCIGETLEEREAGTTLEVVGAQLAGSLPDGVTAENTVVAYEPVWAIGTGKVPTLDQIAEVHDALRADLVARFGA-AGKDLPLLYGGSVKPGNAAEIFGVSNVDGALVGGASLK 232
BLAST of CV884626 vs. ExPASy Swiss-Prot
Match: TPIS_RHOP5 (Triosephosphate isomerase OS=Rhodopseudomonas palustris (strain BisA53) GN=tpiA PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.516e-35 Identity = 92/239 (38.49%), Postives = 123/239 (51.46%), Query Frame = 2 Query: 71 ARKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRS--DFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 781 A + + GNWK NG ++ + + L A + + F V AQ+C GA TG++SAEMLV+ +I+GHSERRA E++ V K A G I CVGET +R++G T+ VV Q + +N V+AYEPVWAIGTG T ++VH +R L E A+ RI+YGGSV +N KEL A P+V+G LVGGASLK Sbjct: 4 AIRALIAGNWKMNGLKAQLAEFEAMLAGAPALADKADLLVCPPATLLHAFGQKLGNGARSFAVGAQDCHANVSGAHTGDLSAEMLVDAGASAIIVGHSERRADHGETDSVVRAKAEAAWRAGAVAIVCVGETQAERDAGQTLDVVGRQLAGSLPDGATAENTVVAYEPVWAIGTGLTPTANDVEQVHKFIRDCLTKRFGGE-GAAVRILYGGSVKPSNAKELMAVPEVNGALVGGASLK 241
BLAST of CV884626 vs. ExPASy Swiss-Prot
Match: TPIS_SYNJB (Triosephosphate isomerase OS=Synechococcus sp. GN=tpiA PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.981e-35 Identity = 94/249 (37.75%), Postives = 129/249 (51.81%), Query Frame = 2 Query: 74 RKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLR-----SDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP-EFIDII 802 R + GNWK + T E ++ + L A +V+ SD V AQN GAFTGE+S ML L + +VI+GHSERR E+++ V ++A A GL I CVGE+ +QRE G T + + Q + I + +N+V+AYEP+WAIGTG+ +A V +R+ L + A I+YGGSV N EL AQP++DG LVGGASL P EF I+ Sbjct: 2 RPILIAGNWKMHKTQAEAREFLRELGLALRSSPSGSASQRQIILCVPFTDLAVVAEQSRGSDIAVGAQNLHWEDQGAFTGEISGPMLAELGVRYVIVGHSERRQYFGETDETVNRRLAAAQRHGLTPILCVGESQQQREQGLTESWIVGQLDRALQGI-DLENLVIAYEPIWAIGTGQTCAAQEANRVIGLIRQHLGN-------AQLPILYGGSVKAGNIDELMAQPEIDGVLVGGASLDPQEFARIV 242
BLAST of CV884626 vs. ExPASy Swiss-Prot
Match: TPIS_RALEJ (Triosephosphate isomerase OS=Ralstonia eutropha (strain JMP134) GN=tpiA PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.981e-35 Identity = 88/179 (49.16%), Postives = 108/179 (60.34%), Query Frame = 2 Query: 257 AQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 787 AQ+ GAFTGEV+A ML + ++GHSERR ES+ V K AL G+ + CVGETL QRE+G T VV Q +A + +S VVLAYEPVWAIGTGK A+ QAQ VHA LR +++ A VA I+YGGSV N EL + D+DG L+GGASLK E Sbjct: 60 AQDVSAEARGAFTGEVAASMLGEFGCTYALVGHSERRTYHGESDAVVAAKALRALEFGIIPVICVGETLAQREAGETEVVVGRQLQAALDALSVEQLGRVVLAYEPVWAIGTGKTASSEQAQAVHAFLRAEVRER-DAGVADRMAILYGGSVKPDNAAELFSMSDIDGGLIGGASLKSE 237
BLAST of CV884626 vs. ExPASy Swiss-Prot
Match: TPIS_STRCO (Triosephosphate isomerase OS=Streptomyces coelicolor GN=tpiA PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.587e-35 Identity = 89/188 (47.34%), Postives = 116/188 (61.70%), Query Frame = 2 Query: 257 AQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGS----TVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDIIK 805 AQ+ GGA+TGE+S ML L +V +GHSERR E+++ V KV A GL I CVGE L+ RE+G+ T+A V K +A + + ++VV+AYEPVWAIGTGKV AQEV A +R L + S E+A RI YGGSV N E+ A+PD+DG LVGGASL EF+ I++ Sbjct: 69 AQDISAHDGGAYTGEISGPMLAKLKCTYVAVGHSERRQYHAETDEIVNAKVKAAYKHGLTPILCVGEELDVREAGNHVEHTLAQVEGGLKDLAAEQA--ESVVIAYEPVWAIGTGKVCGADDAQEVCAAIRGKLAELYSQELADKVRIQYGGSVKSGNVAEIMAKPDIDGALVGGASLDSDEFVKIVR 254 The following BLAST results are available for this feature:
BLAST of CV884626 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884626 ID=CV884626; Name=CV884626; organism=Citrus sinensis; type=EST; length=909bpback to top |