CV884626
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884626 vs. ExPASy Swiss-Prot
Match: TPIS_MYCHJ (Triosephosphate isomerase OS=Mycoplasma hyopneumoniae (strain J / ATCC 25934 / NCTC 10110) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.735e-34 Identity = 88/241 (36.51%), Postives = 125/241 (51.87%), Query Frame = 2 Query: 77 KFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSV----LRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 787 K + GNWK N T E + + + S+ L +AAQN GAFTGE+S +ML +L +VI+GHSERR + E ++ + +K+ A L + CVGE+L + E+G T V+ Q AI + + N+ ++AYEP+WAIGTGK AT A A++V +++ +T +IYGGSVN N EL +Q +DG LVGGASL PE Sbjct: 2 KKIIIGNWKMNKTVSETRDFIQKFDIFYQENVGKIKEDLDFAIAPSFISLSLISKSLTKKLEIAAQNLSQFDSGAFTGEISGKMLQDLGTKYVIIGHSERREIFKEKDEELKNKILQAQKYDLIPVFCVGESLLEFEAGLTKKVIISQINAI-KSVLNFQKAIIAYEPIWAIGTGKTATAAIAEKVCGLIKE--------NFGKNTMVIYGGSVNSKNINELVSQKSIDGALVGGASLDPE 233
BLAST of CV884626 vs. ExPASy Swiss-Prot
Match: TPIS_MYCH2 (Triosephosphate isomerase OS=Mycoplasma hyopneumoniae (strain 232) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.735e-34 Identity = 88/241 (36.51%), Postives = 125/241 (51.87%), Query Frame = 2 Query: 77 KFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSV----LRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 787 K + GNWK N T E + + + S+ L +AAQN GAFTGE+S +ML +L +VI+GHSERR + E ++ + +K+ A L + CVGE+L + E+G T V+ Q AI + + N+ ++AYEP+WAIGTGK AT A A++V +++ +T +IYGGSVN N EL +Q +DG LVGGASL PE Sbjct: 2 KKIIIGNWKMNKTVSETRDFIQKFDIFYQENVGKIKEDLDFAIAPSFISLSLISKSLTKKLEIAAQNLSQFDSGAFTGEISGKMLQDLGTKYVIIGHSERREIFKEKDEELKNKILQAQKYDLIPVFCVGESLLEFEAGLTKKVIISQINAI-KSVLNFQKAIIAYEPIWAIGTGKTATAAIAEKVCGLIKE--------NFGKNTMVIYGGSVNSKNINELVSQKSIDGALVGGASLDPE 233
BLAST of CV884626 vs. ExPASy Swiss-Prot
Match: TPIS_MYCCT (Triosephosphate isomerase OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.735e-34 Identity = 90/240 (37.50%), Postives = 125/240 (52.08%), Query Frame = 2 Query: 74 RKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNV--VLAYEPVWAIGTGKVATPAQAQEVHAELRKWLK---DNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 778 RK + GNWK NGT+ K + L Q + L + +AAQN GA+TGE+S ML + + +VI+GHSERR + E++ + K L + I C GE+LE +E G T+ V Q I + IS D + ++AYEP+WAIGTGK A A+EV ++R+ L DN++AE I YGGSV +N +E P++DG LVGGASL Sbjct: 2 RKKVIFGNWKMNGTN---KSLEDFLYQVDNKVNNSKITAGLAVPYVMLQTGIKLAKNVKIAAQNVHFELKGAYTGEISVSMLKEIGVEYVIIGHSERREMFFETDLDINKKAKILLENNMIPIICCGESLETKEQGKTIEFVNNQINLIYQNISKQDAIKTIIAYEPIWAIGTGKTANSLDAEEVCKKIRENLAKIYDNLTAE---KITIQYGGSVKPSNIQEYLKMPNIDGALVGGASL 235
BLAST of CV884626 vs. ExPASy Swiss-Prot
Match: TPIS1_RHIME (Triosephosphate isomerase 1 OS=Rhizobium meliloti GN=tpiA1 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.735e-34 Identity = 89/235 (37.87%), Postives = 121/235 (51.49%), Query Frame = 2 Query: 86 VGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLR-SDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 787 V GNWK NGT + +I + + ++ S + AQ+C ++ GA TGEVSAEM+ + VI+GHSERR E + V K A L I CVGET E+R++G T+ ++ Q + +N V+AYEPVWAIGTG T + +E HA +R+ L AE RI+YGGSV +N KEL +VDG L+GGASLK + Sbjct: 9 VAGNWKMNGTRASLDQIKAMAEGVKGDLSARVDALICPPATLLYVATALCDDSPLMIGAQDCHQKQSGAHTGEVSAEMVADCFGTHVIVGHSERRTDHGEGDALVRAKTEAAHGADLVAIVCVGETEEERKAGRTLDILKRQLSESLPDQATAENTVIAYEPVWAIGTGLTPTVSDVEEAHAFMRRELVSRFGAE-GGKMRILYGGSVKPSNAKELMGVANVDGALIGGASLKAD 242
BLAST of CV884626 vs. ExPASy Swiss-Prot
Match: TPIS_SYNR3 (Triosephosphate isomerase OS=Synechococcus sp. (strain RCC307) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.878e-34 Identity = 87/240 (36.25%), Postives = 125/240 (52.08%), Query Frame = 2 Query: 71 ARKFFVGGNWKCNGTSEEVKKIVST-LNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 787 +R + GNWK + T + K+ + L Q +++ SD +A+QN + GAFTGE+SAEML+ L + + I+GHSE R +ES++ + + + + GL I CVGE+ EQR S T V+ Q + E I +V+AYEP+WAIGTGK +A V +R W+ + I YGGSV N EL A+ D+DG LVGGASL+P+ Sbjct: 5 SRPVVIAGNWKMHMTCAQAKQYAAAFLPQVANAPKDRSIVLAPPFTAISTLQEALAGSDVQIASQNVHWKDSGAFTGEISAEMLLELGVGYTIVGHSEPRKYFSESDEQINQRARASQAAGLIPILCVGESDEQRSSNETERVIRRQVEQGLEGIDP-SKLVVAYEPIWAIGTGKTCESEEANRVCGLIRNWVG-------YPNLTIQYGGSVKPGNIDELMAKSDIDGVLVGGASLEPD 236
BLAST of CV884626 vs. ExPASy Swiss-Prot
Match: TPIS_PEDPA (Triosephosphate isomerase OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.878e-34 Identity = 90/245 (36.73%), Postives = 127/245 (51.84%), Query Frame = 2 Query: 86 VGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQ-TKAI----AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDII 802 + GNWK N +E ++ + + AA+N + GAFTGE S + L + + +V++GHSERR E+++ + K + + I C GETLEQRE+G T VA Q T A+ AE+++ V+AYEP+WAIGTGK A+ QAQEV +R+ + VA RI YGGSV AN EL + D+DG LVGGASL PE F++++ Sbjct: 6 IAGNWKMNKNPQETQEFLDAIKGKLPDASVVESVIAAPAIDLSTLVAFSKDEQLKTAAENSYFEDEGAFTGETSPKALNEMGVNYVVIGHSERRQYFGETDEDINKKAKAIFNNNMTPIICCGETLEQREAGETNEWVAGQITNALKDLTAEQVAA---SVIAYEPIWAIGTGKTASSDQAQEVCHVIRETVAKLYDQTVADKVRIQYGGSVKPANIAELMGKEDIDGGLVGGASLDPESFLELV 247
BLAST of CV884626 vs. ExPASy Swiss-Prot
Match: TPIS_LACLM (Triosephosphate isomerase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.878e-34 Identity = 89/245 (36.33%), Postives = 127/245 (51.84%), Query Frame = 2 Query: 68 MARKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKA-----IAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 787 M+RK + GNWK N T E + V + S+ +AA+N + GAFTGE S +V+L I ++I+GHSERR +E+++ + K + G I C GETLE E+G T V+ Q +A AE++SN +V+AYEP+WAIGTGK AT A E +R ++ EV+ + RI YGGSV + L A+ ++DG LVGGASL+ + Sbjct: 1 MSRKPIIAGNWKMNKTLSEAQAFVEAVKNNLPSSDNVESVIGAPALFLAPMAYLRQGSELKLAAENSYFENAGAFTGENSPAAIVDLGIEYIIIGHSERREYFHETDEDINKKAKAIFAAGATPILCCGETLETFEAGKTAEWVSGQIEAGLAGLTAEQVSN---LVIAYEPIWAIGTGKTATNEIADETCGVVRSTVEKLYGKEVSEAVRIQYGGSVKPETIEGLMAKENIDGALVGGASLEAD 242
BLAST of CV884626 vs. ExPASy Swiss-Prot
Match: TPIS_CHRVO (Triosephosphate isomerase OS=Chromobacterium violaceum GN=tpiA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.878e-34 Identity = 83/179 (46.37%), Postives = 111/179 (62.01%), Query Frame = 2 Query: 284 GAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSATVK 820 GAFTGEVSA ML ++ + ++GHSERR E N + K+ A++ G+ + CVGETL QRE+G + VV EQ AI I++ + VV AYEPVWAIGTGKVA+ Q E+HA ++ W N +A R++YGGSV N + + A +VDG LVGGASL + +I A K Sbjct: 72 GAFTGEVSAAMLADVGCRYALVGHSERRQYFREDNAALLAKMRNAIAAGVTPVLCVGETLAQREAGDYLNVVREQL-AILSDIADGEYVV-AYEPVWAIGTGKVASLEQIAEIHAFIKNWCLQNAGG--SAKIRVLYGGSVKAENAEAILATENVDGALVGGASLDADSFRVICQAAGK 246
BLAST of CV884626 vs. ExPASy Swiss-Prot
Match: TPIS_BRASB (Triosephosphate isomerase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.878e-34 Identity = 92/242 (38.02%), Postives = 125/242 (51.65%), Query Frame = 2 Query: 86 VGGNWKCNGTSEEVKKIVSTL-NQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIK 805 + GNWK NG + + L AE K+ V AQ+C + GA TG++SAEML + +I+GHSERRA ES+ V K GL I CVGET +QR++G T+ ++ Q + S N+ +AYEPVWAIGTG T +++HA +R L + + E A RI+YGGSV +N EL A +V+G LVGGASLK +F+ I K Sbjct: 9 IAGNWKMNGLKASTAEFEAMLAGAAEVTGKADLLVCPPATLLAGFADKARGTRAVAVGAQDCHAKASGAHTGDLSAEMLADAGASAIIVGHSERRADHGESDVVVHQKTEAVWRAGLVAIVCVGETQQQRDAGQTLDILRGQLNLSLPQGSTAANLTVAYEPVWAIGTGLTPTAKDVEQIHAFIRTLLIERFNGE-GARMRILYGGSVKPSNAAELMAVANVNGALVGGASLKAADFLAIAK 249
BLAST of CV884626 vs. ExPASy Swiss-Prot
Match: TPIS_PHYAS (Triosephosphate isomerase OS=Phytoplasma australiense GN=tpiA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 6.371e-34 Identity = 76/190 (40.00%), Postives = 119/190 (62.63%), Query Frame = 2 Query: 251 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 811 + AQN + GAFTGE+S LV+L + +V+LGHSERR L E++ V K+ AL L + C+GETLE +E+ T + +Q + + D +++AYEPVWAIGTGK A+P +A + ++R+ + + SA+V S +I+YGGSV+ N + + Q ++DG LVG ASL+ +F++ ++A Sbjct: 64 IGAQNAFHESEGAFTGEISPLNLVSLGVKYVLLGHSERRVLFGETDQLVNLKLLKALQNNLSPVLCLGETLETKENNKTKEFLEKQLTQALKDVPQEDLEKILIAYEPVWAIGTGKTASPQEANQTIKQIREKVTNLYSAQVVQSLKILYGGSVSSNNVEAILEQNEIDGVLVGKASLETKDFLNFTQAA 253 The following BLAST results are available for this feature:
BLAST of CV884626 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884626 ID=CV884626; Name=CV884626; organism=Citrus sinensis; type=EST; length=909bpback to top |