CV884611

Overview
NameCV884611
Unique NameCV884611
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length946
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: 4CLL6_ARATH (4-coumarate--CoA ligase-like 6 OS=Arabidopsis thaliana GN=4CLL6 PE=2 SV=2)

HSP 1 Score: 268.085 bits (684), Expect = 5.290e-71
Identity = 124/237 (52.32%), Postives = 179/237 (75.53%), Query Frame = -1
Query:  206 SLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKLATSKL 916
            SL+ V SG APLSR+ IE F+Q  P V ++QGYG+TEST +G    + E+  +Y + G+L+P+M+AK+VD  SG  L     GELW++GP +MKGY +NP+AT  ++  + WLRTGD+ Y D+DG++FIVDR+KE+IKYKG+Q+ PA+LEA+L++HP I DAAV   P++E G+ P+A+VVR   + LSE +V+ +VA QVAPY++VR+V  V SIPK+P+GKILRK+L ++ T+ +
Sbjct:  326 SLKQVSSGAAPLSRKFIEDFLQTLPHVDLIQGYGMTESTAVGTRGFNSEKLSRYSSVGLLAPNMQAKVVDWSSGSFLPPGNRGELWIQGPGVMKGYLNNPKATQMSIVEDSWLRTGDIAYFDEDGYLFIVDRIKEIIKYKGFQIAPADLEAVLVSHPLIIDAAVTAAPNEECGEIPVAFVVRRQETTLSEEDVISYVASQVAPYRKVRKVVMVNSIPKSPTGKILRKELKRILTNSV 562          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: 4CLL7_ORYSJ (4-coumarate--CoA ligase-like 7 OS=Oryza sativa subsp. japonica GN=4CLL7 PE=2 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 4.478e-70
Identity = 131/232 (56.47%), Postives = 174/232 (75.00%), Query Frame = -1
Query:  227 LSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLI 922
            L +L+ +  GGAPL    IE F +++P V +  GYG TE+ GI     S EE    G+AG ++ ++E KIVD  +GK L   Q GELW++GP++M GY  + EA  +T +SEGWL+TGDLCYID DGF+F+VDRLKELIKYK YQVPPAELE +L + P+I DAAV+P+P +EAGQ P+A VV++ GS+L+E EVM  VA+QVAPYK++R+V FV SIPK+PSGKILR++L+
Sbjct:  317 LPALERITCGGAPLPAPAIERFRRRFPHVDLCMGYGSTEAGGISRMI-SQEECNHIGSAGRVTENVEVKIVDHVTGKPLPAGQQGELWVRGPAVMTGYVGDNEANATTFNSEGWLKTGDLCYIDQDGFLFVVDRLKELIKYKAYQVPPAELELVLHSLPQIVDAAVMPYPHEEAGQIPVALVVKQPGSKLTEAEVMYNVAKQVAPYKKIRKVLFVDSIPKSPSGKILRRELV 547          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: 4CL1_TOBAC (4-coumarate--CoA ligase 1 OS=Nicotiana tabacum GN=4CL1 PE=2 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 1.702e-69
Identity = 132/240 (55.00%), Postives = 178/240 (74.17%), Query Frame = -1
Query:  230 IRSKYDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESR---KYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 940
            I   YDLSS+++V+SG APL +E+ +    K+P  ++ QGYG+TE+  + A   +  +     K G  G +  + E KIVDPD+G +L  NQ GE+ ++G  IMKGY ++PEATT T+D EGWL TGD+ +ID+D  +FIVDRLKELIKYKG+QV PAE+EALLL HP ISDAAVVP  D++AG+ P+A+VVR  GS ++E+EV DF+++QV  YKRV+RV FV ++PK+PSGKILRKDL
Sbjct:  298 IVDSYDLSSVRTVMSGAAPLGKELEDAVRTKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPFDIKSGACGTVVRNAEMKIVDPDTGCSLPRNQPGEICIRGDQIMKGYLNDPEATTRTIDKEGWLHTGDIGFIDEDDELFIVDRLKELIKYKGFQVAPAEIEALLLNHPNISDAAVVPMKDEQAGEVPVAFVVRSNGSAITEDEVKDFISKQVIFYKRVKRVFFVETVPKSPSGKILRKDL 537          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: 4CL2_TOBAC (4-coumarate--CoA ligase 2 OS=Nicotiana tabacum GN=4CL2 PE=2 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 3.791e-69
Identity = 132/236 (55.93%), Postives = 176/236 (74.58%), Query Frame = -1
Query:  230 YDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESR---KYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 928
            YDLSS+++V+SG APL +E+ +    K+P  ++ QGYG+TE+  + A   +  +     K G  G +  + E KIVDP +G +L  NQ+GE+ ++G  IMKGY ++PEAT  T+D EGWL TGD+ YIDDD  +FIVDRLKELIKYKG+QV PAELEALLL HP ISDAAVVP  D++AG+ P+A+VVR  GS ++E+EV DF+++QV  YKR++RV FV +IPK+PSGKILRKDL
Sbjct:  297 YDLSSVRTVMSGAAPLGKELEDTVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPKTGNSLPRNQSGEICIRGDQIMKGYLNDPEATARTIDKEGWLYTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLLNHPNISDAAVVPMKDEQAGEVPVAFVVRSNGSTITEDEVKDFISKQVIFYKRIKRVFFVDAIPKSPSGKILRKDL 532          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: 4CL2_SOLTU (4-coumarate--CoA ligase 2 OS=Solanum tuberosum GN=4CL2 PE=3 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 2.457e-68
Identity = 129/236 (54.66%), Postives = 176/236 (74.58%), Query Frame = -1
Query:  230 YDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESR---KYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 928
            YDLSS+++V+SG APL +E+ +    K+P  ++ QGYG+TE+  + A   +  +     K G  G +  + E KIVDPD+G +L  NQ GE+ ++G  IMKGY ++PEAT  T++ EGWL TGD+ +IDDD  +FIVDRLKELIKYKG+QV PAELEALL+ HP ISDAAVVP  D++AG+ P+A+VVR  GS ++E+EV DF+++QV  YKR++RV FV ++PK+PSGKILRKDL
Sbjct:  300 YDLSSVRTVMSGAAPLGKELEDAVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPFDIKSGACGTVVRNAEMKIVDPDTGCSLPRNQPGEICIRGDQIMKGYLNDPEATARTIEKEGWLHTGDIGFIDDDDELFIVDRLKELIKYKGFQVAPAELEALLINHPDISDAAVVPMIDEQAGEVPVAFVVRSNGSTITEDEVKDFISKQVIFYKRIKRVFFVETVPKSPSGKILRKDL 535          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: 4CL1_SOLTU (4-coumarate--CoA ligase 1 OS=Solanum tuberosum GN=4CL1 PE=3 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 2.457e-68
Identity = 129/236 (54.66%), Postives = 176/236 (74.58%), Query Frame = -1
Query:  230 YDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESR---KYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 928
            YDLSS+++V+SG APL +E+ +    K+P  ++ QGYG+TE+  + A   +  +     K G  G +  + E KIVDPD+G +L  NQ GE+ ++G  IMKGY ++PEAT  T++ EGWL TGD+ +IDDD  +FIVDRLKELIKYKG+QV PAELEALL+ HP ISDAAVVP  D++AG+ P+A+VVR  GS ++E+EV DF+++QV  YKR++RV FV ++PK+PSGKILRKDL
Sbjct:  300 YDLSSVRTVMSGAAPLGKELEDAVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPFDIKSGACGTVVRNAEMKIVDPDTGCSLPRNQPGEICIRGDQIMKGYLNDPEATARTIEKEGWLHTGDIGFIDDDDELFIVDRLKELIKYKGFQVAPAELEALLINHPDISDAAVVPMIDEQAGEVPVAFVVRSNGSTITEDEVKDFISKQVIFYKRIKRVFFVETVPKSPSGKILRKDL 535          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: 4CL_VANPL (4-coumarate--CoA ligase OS=Vanilla planifolia GN=4CL PE=3 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 4.634e-67
Identity = 131/245 (53.47%), Postives = 176/245 (71.84%), Query Frame = -1
Query:  206 YDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESR---KYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL-IKLATSKL 928
            YDLSS+++V+SG APL +E+ +    K+P  ++ QGYG+TE+  + A   +  +     K G  G +  + E KIVDP++G +L  N  GE+ ++G  IMKGY ++PEAT  T+D EGWL TGD+ YIDDD  +FIVDRLKELIKYKG+QV PAELEALLLTHP ISDAAVVP  D+ AG+ P+A+VV+  G  ++E+E+  F+++QV  YKR+ RV FV +IPK PSGKILRKDL  +LA + L
Sbjct:  306 YDLSSVRTVMSGAAPLGKELEDAVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPFDIKSGACGTVVRNAEMKIVDPETGSSLPRNHPGEICIRGDQIMKGYLNDPEATARTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLLTHPCISDAAVVPMKDEAAGEVPVAFVVKSNGHNITEDEIKQFISKQVIFYKRINRVFFVEAIPKAPSGKILRKDLRARLAAAAL 550          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: 4CLL1_ORYSJ (4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp. japonica GN=4CLL1 PE=2 SV=2)

HSP 1 Score: 253.062 bits (645), Expect = 1.761e-66
Identity = 130/244 (53.28%), Postives = 179/244 (73.36%), Query Frame = -1
Query:  206 KYDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGI-GASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLI-KLATSKL 931
            KYDLSSL+ + SG APL ++V+E   +K+P   I+QGYG+TE+ GI         ++R++G+ G L   +EAKIVD  + K L  NQ GE+ ++GP++M+GYF+N +AT  T+  +GWL TGDL Y D  G +F+VDRLKELIKYKG+Q+ PAELE LLL+HP+I DA V+PFPD +AG+ P+AYVVR   S L+E +V  F+ +QVA YKR++RV FV S+PK+ SGKILR+ LI ++ +SKL
Sbjct:  310 KYDLSSLKFIGSGAAPLGKDVMEVVAKKFPDSEIVQGYGMTETCGIISLEYPEKGQAREFGSTGTLVSGVEAKIVDIKTLKHLPPNQVGEICVRGPNVMQGYFNNVQATEFTI-KQGWLHTGDLGYFDGGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFPDAKAGEVPIAYVVRSPDSSLTEVDVQKFIEKQVAYYKRLKRVTFVGSVPKSASGKILRRQLIAQVRSSKL 552          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: 4CL2_PETCR (4-coumarate--CoA ligase 1 OS=Petroselinum crispum GN=4CL2 PE=2 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.761e-66
Identity = 131/246 (53.25%), Postives = 178/246 (72.36%), Query Frame = -1
Query:  206 KYDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESR---KYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL-IKLATSKL 931
            KYDLSS+++V+SG APL +E+ +    K+P  ++ QGYG+TE+  + A   +  +     K G  G +  + E KIVDP++  +L  NQ GE+ ++G  IMKGY ++PE+T +T+D EGWL TGD+ +IDDD  +FIVDRLKE+IKYKG+QV PAELEALLLTHP ISDAAVVP  D++AG+ P+A+VVR  G   +E E+  FV++QV  YKR+ RV FV +IPK+PSGKILRKDL  K+A+  L
Sbjct:  297 KYDLSSVRTVMSGAAPLGKELEDAVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPYEIKSGACGTVVRNAEMKIVDPETNASLPRNQRGEICIRGDQIMKGYLNDPESTRTTIDEEGWLHTGDIGFIDDDDELFIVDRLKEIIKYKGFQVAPAELEALLLTHPTISDAAVVPMIDEKAGEVPVAFVVRTNGFTTTEEEIKQFVSKQVVFYKRIFRVFFVDAIPKSPSGKILRKDLRAKIASGDL 542          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: 4CL4_ORYSJ (Probable 4-coumarate--CoA ligase 4 OS=Oryza sativa subsp. japonica GN=4CL4 PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 2.300e-66
Identity = 126/235 (53.62%), Postives = 172/235 (73.19%), Query Frame = -1
Query:  230 DLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESR---KYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 925
            DL+S++ V+SG AP+ +++ + F+ K P   + QGYG+TE+  + A   +  +     K G+ G +  + E KIVDPD+G  L  NQ+GE+ ++G  IMKGY ++PE+T +T+D  GWL TGD+ Y+DDD  IFIVDRLKE+IKYKG+QVPPAELEALL+THP I DAAVVP  D+ AG+ P+A++VR  GS +SENE+  FVA++V  YKR+ +V F  SIPK+PSGKILRKDL
Sbjct:  307 DLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFAKEPFEVKSGSCGTVVRNAELKIVDPDTGATLGRNQSGEICIRGEQIMKGYLNDPESTKNTIDKGGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPDIKDAAVVPMIDEIAGEVPVAFIVRIEGSAISENEIKQFVAKEVVFYKRLNKVFFADSIPKSPSGKILRKDL 541          
The following BLAST results are available for this feature:
BLAST of CV884611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
4CLL6_ARATH5.290e-7152.324-coumarate--CoA ligase-like 6 OS=Arabidopsis thal... [more]
4CLL7_ORYSJ4.478e-7056.474-coumarate--CoA ligase-like 7 OS=Oryza sativa sub... [more]
4CL1_TOBAC1.702e-6955.004-coumarate--CoA ligase 1 OS=Nicotiana tabacum GN=... [more]
4CL2_TOBAC3.791e-6955.934-coumarate--CoA ligase 2 OS=Nicotiana tabacum GN=... [more]
4CL2_SOLTU2.457e-6854.664-coumarate--CoA ligase 2 OS=Solanum tuberosum GN=... [more]
4CL1_SOLTU2.457e-6854.664-coumarate--CoA ligase 1 OS=Solanum tuberosum GN=... [more]
4CL_VANPL4.634e-6753.474-coumarate--CoA ligase OS=Vanilla planifolia GN=4... [more]
4CLL1_ORYSJ1.761e-6653.284-coumarate--CoA ligase-like 1 OS=Oryza sativa sub... [more]
4CL2_PETCR1.761e-6653.254-coumarate--CoA ligase 1 OS=Petroselinum crispum ... [more]
4CL4_ORYSJ2.300e-6653.62Probable 4-coumarate--CoA ligase 4 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008E05_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T7_E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884611 ID=CV884611; Name=CV884611; organism=Citrus sinensis; type=EST; length=946bp
TGTGGCCCCTGTTTANCATATAGATCATTACAAGAAAAACAAAACATCTA
AATTTCAGTGACAAGGCAAAATATATATAAACCAGCATAACGGATTTTAG
TACAGCATAATTTTGCTACAGGCATAAACAAGATGTTGAATGAGAAATAG
AACCACTACTTCTCTGTTTGAGGCCCTCTCTTTGGGCAAAAGCCCCAGGC
ATTCAAAGTTTGGATGTCGCAAGCTTGATGAGATCCTTCCTGAGAATCTT
GCCTGATGGATTCTTGGGTATTGAAGCTACAAATGCCACTCTCCGAACCC
TCTTGTATGGGGCAACCTGTCTTGCTACAAAATCCATGACTTCATTCTCT
GATAATCGACTTCCAGCTTCCCGTACCACATATGCCATGGGATATTGCCC
AGCCTCCTTGTCAGGAAATGGTACGACAGCAGCATCAGAAATTTTTGGAT
GAGTTAGTAGCAAAGCCTCTAGTTCTGCTGGAGGGACCTGATAACCTTTG
TACTTGATCAGCTCCTTTAATCGATCAACAATAAAAATGAAGCCATCATC
ATCAATGTAGCAGAGATCTCCAGTTCTTAACCATCCTTCAGAATCAAGAG
TTGATGTTGTAGCTTCTGGATTACTGAAATAACCTTTCATGATGGATGGA
CCCTTAAGCCAAAGCTCACCCGTCTGATTCACCAACAACGCCTTGCCACT
GTCTGGGTCCACAATCTTCGCCTCCATGCTCGGCGACAGCATTCCCGCCG
TACCATACTTTCGACTCTCCTCCAACGAATCCGTTGACGCTCCAATGCCC
GTTGACTCGGTCAAACCATAACCCTGAAGAATCCTCACCTTTGGATATTT
CTGAACGAATCCTTCTATCACTTCCCTACTCAGCGGGGCCCCACCGGATA
AAACCGATTGCAGCGAACTCAAATCGTACTTTGACCGTATCTGATC
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