CV884611

Overview
NameCV884611
Unique NameCV884611
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length946
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: 4CLL3_ORYSJ (4-coumarate--CoA ligase-like 3 OS=Oryza sativa subsp. japonica GN=4CLL3 PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 4.488e-62
Identity = 115/229 (50.22%), Postives = 163/229 (71.18%), Query Frame = -1
Query:  236 LSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRK 922
            ++SL  V  G AP++  +I  F+Q +P V  +QGYG+TEST +G    +  + +KY + G+L+P+M AKIV  +S   L    +GELWL GP IMKGY S+ +   +  D  GWLRTGD+ Y D DG+++IV RLK+ IKYKG+Q+ P +LE +L+ HP+I D AV    D+EAG+ P+A+VVR +GS LS  +VM++VA+QVAPYKRVR+V FV +IPK+P+GK+LR+
Sbjct:  343 VASLVQVSCGAAPITAALIHEFLQAFPHVDFIQGYGMTESTAVGTRGFNTSKHKKYTSVGLLAPNMHAKIVHLESSSCLPPGFSGELWLHGPGIMKGYLSDDDDACTRKD--GWLRTGDIAYFDLDGYLYIVGRLKDTIKYKGFQIAPGDLEEVLIHHPEILDVAVTSAEDEEAGEIPVAFVVRRSGSNLSCKQVMEYVAKQVAPYKRVRKVVFVEAIPKSPAGKVLRR 569          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: 4CLL8_ORYSJ (Putative 4-coumarate--CoA ligase-like 8 OS=Oryza sativa subsp. japonica GN=4CLL8 PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 5.862e-62
Identity = 134/280 (47.86%), Postives = 170/280 (60.71%), Query Frame = -1
Query:  221 LQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGI------------------------------GASTDSLEESRKYG-------TAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTL-----------DSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGS-RLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKL 913
            L+ V+S GAPL RE +  F   +P V + Q YGLTE+TGI                               A+T  ++E    G       + G L P +EAKIVDPDSG+ L   +TGELW++GPS M+GY +N EAT   L             E WLRTGDLCY+D  G +++VDR+KELIK   YQV PAELE +L THP I DAAV P+PDKEAG+ PMAYVV++ GS  L E+EV+ FV  +VAPYK++R+V FV SIP++PSGKILR+ L  L
Sbjct:  319 LRQVVSSGAPLQREHMARFRSCFPAVNLGQCYGLTETTGIVTMCDLQHNDNGIDKVEMPPSSTDMTFVAVAATTTEVKERSTGGGGGGGGVSIGRLMPDVEAKIVDPDSGELLPPRRTGELWVRGPSTMRGYLNNEEATALALVAAAGSVSVSGGGERWLRTGDLCYVDSRGLVYVVDRVKELIKCNAYQVAPAELEDVLATHPDIHDAAVAPYPDKEAGEIPMAYVVKKQGSGHLQEDEVISFVQNKVAPYKKIRKVVFVDSIPRSPSGKILRRQLKNL 598          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: 4CL5_ORYSJ (Probable 4-coumarate--CoA ligase 5 OS=Oryza sativa subsp. japonica GN=4CL5 PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.706e-61
Identity = 118/237 (49.79%), Postives = 166/237 (70.04%), Query Frame = -1
Query:  230 KYDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESR---KYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 931
            ++DLSS++ V+SG AP+ +E+ +    K P   + QGYG+TE+  + +   +  +     K G  G +  + E KIVDPD+G +L  NQ GE+ ++G  IMKGY +NPEAT  T+D +GWL TGD+ ++DDD  IFIVDRLKELIKYKG+QV PAELEA+L+ H  ++DAAVVP  D   G+ P+A+VV   GS ++++E+  +VA+QV  YKR+ ++ FV +IPK PSGKILRKDL
Sbjct:  292 RHDLSSIRMVISGAAPMGKELQDIVHAKLPNAVLGQGYGMTEAGPVLSMCMAFAKEPTPVKSGACGTVVRNAELKIVDPDTGLSLPRNQPGEICIRGKQIMKGYLNNPEATEKTIDKDGWLHTGDIGFVDDDDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHAAVADAAVVPMKDDSCGEIPVAFVVARDGSGITDDEIKQYVAKQVVFYKRLHKIFFVDAIPKAPSGKILRKDL 528          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: 4CL3_ARATH (4-coumarate--CoA ligase 3 OS=Arabidopsis thaliana GN=4CL3 PE=1 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 2.228e-61
Identity = 121/240 (50.42%), Postives = 174/240 (72.50%), Query Frame = -1
Query:  230 SKYDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTE-----STGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 934
            + YDLSS++ VLSG APL +E+ +   ++ P+  + QGYG+TE     S  +G + + +    K G+ G +  + E K+V  ++  +L  NQ GE+ ++G  IMK Y ++PEAT++T+D EGWL TGD+ Y+D+D  IFIVDRLKE+IK+KG+QVPPAELE+LL+ H  I+DAAVVP  D+ AG+ P+A+VVR  G+ ++E +V ++VA+QV  YKR+ +V FVASIPK+PSGKILRKDL
Sbjct:  319 NSYDLSSVRFVLSGAAPLGKELQDSLRRRLPQAILGQGYGMTEAGPVLSMSLGFAKEPIPT--KSGSCGTVVRNAELKVVHLETRLSLGYNQPGEICIRGQQIMKEYLNDPEATSATIDEEGWLHTGDIGYVDEDDEIFIVDRLKEVIKFKGFQVPPAELESLLINHHSIADAAVVPQNDEVAGEVPVAFVVRSNGNDITEEDVKEYVAKQVVFYKRLHKVFFVASIPKSPSGKILRKDL 556          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: LUCI_PHOPY (Luciferin 4-monooxygenase OS=Photinus pyralis PE=1 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 5.487e-60
Identity = 125/241 (51.87%), Postives = 160/241 (66.39%), Query Frame = -1
Query:  224 KYDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVR-RVAFVASIPKNPSGKI----LRKDLIK 931
            KYDLS+L  + SGGAPLS+EV E   +++    I QGYGLTE+T     T   E   K G  G + P  EAK+VD D+GK L VNQ GEL ++GP IM GY +NPEAT + +D +GWL +GD+ Y D+D   FIVDRLK LIKYKGYQV PAELE++LL HP I DA V   PD +AG+ P A VV E G  ++E E++D+VA QV   K++R  V FV  +PK  +GK+    +R+ LIK
Sbjct:  303 KYDLSNLHEIASGGAPLSKEVGEAVAKRFHLPGIRQGYGLTETTSAILITP--EGDDKPGAVGKVVPFFEAKVVDLDTGKTLGVNQRGELCVRGPMIMSGYVNNPEATNALIDKDGWLHSGDIAYWDEDEHFFIVDRLKSLIKYKGYQVAPAELESILLQHPNIFDAGVAGLPDDDAGELPAAVVVLEHGKTMTEKEIVDYVASQVTTAKKLRGGVVFVDEVPKGLTGKLDARKIREILIK 541          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: 4CLL9_ORYSJ (4-coumarate--CoA ligase-like 9 OS=Oryza sativa subsp. japonica GN=4CLL9 PE=2 SV=2)

HSP 1 Score: 229.95 bits (585), Expect = 1.596e-59
Identity = 117/242 (48.35%), Postives = 168/242 (69.42%), Query Frame = -1
Query:  230 IRSKYDLS--SLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIG---ASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 940
            +  ++DLS  +L+SV++  APL+ +++  F +K+P V++ + YGLTE + I    A+ D      K  + G + P++E K VDPD+G++L  N  GEL ++  S+M+GY+   E T  T+D +GWL TGD+ YID DG +FIVDR+KELIKYKG+QV PAELEA+LL+HP + DAAV   PD+EAG+ P+A VVR  G+   E E++ +VA +VA YKRVR +  V +IPK+ SGKILR+ L
Sbjct:  302 VADEFDLSDLALKSVMTAAAPLAPDLLAAFQRKFPGVQVEEAYGLTEHSCITLTHAAGDGHGHVAKKSSVGFILPNLEVKFVDPDTGRSLPANTPGELCVRSQSVMQGYYKRKEETERTVDGKGWLHTGDVGYIDGDGDVFIVDRIKELIKYKGFQVAPAELEAVLLSHPSVEDAAVFGVPDEEAGEVPVACVVRRHGAEEGEEEIVAYVAERVASYKRVRVLHIVDAIPKSVSGKILRRQL 543          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: 4CL4_ARATH (4-coumarate--CoA ligase 4 OS=Arabidopsis thaliana GN=4CL4 PE=1 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 2.085e-59
Identity = 117/236 (49.58%), Postives = 163/236 (69.07%), Query Frame = -1
Query:  230 KYDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEE--SRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 931
            +YDLSS++ +LSG A L +E+ +    K+P     QGYG+TES  +  S    +     K G  G +  + E K+VD ++G +L  N++GE+ ++G  +MKGY ++PEAT  T+D +GWL TGD+ ++DDD  IFIVDRLKELIK+KGYQV PAELEALL++HP I DAAVV   D+ A + P+A+V R  GS+L+E++V  +V +QV  YKR++ V F+  IPK  SGKILRKDL
Sbjct:  325 RYDLSSVRIMLSGAATLKKELEDAVRLKFPNAIFGQGYGMTESGTVAKSLAFAKNPFKTKSGACGTVIRNAEMKVVDTETGISLPRNKSGEICVRGHQLMKGYLNDPEATARTIDKDGWLHTGDIGFVDDDDEIFIVDRLKELIKFKGYQVAPAELEALLISHPSIDDAAVVAMKDEVADEVPVAFVARSQGSQLTEDDVKSYVNKQVVHYKRIKMVFFIEVIPKAVSGKILRKDL 560          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: LUCI_LUCCR (Luciferin 4-monooxygenase OS=Luciola cruciata PE=1 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 4.645e-59
Identity = 121/234 (51.71%), Postives = 159/234 (67.95%), Query Frame = -1
Query:  245 QIRSKYDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVR-RVAFVASIPKNPSGKI 943
            ++ +KYDLS+L  + SGGAPLS+EV E   +++    + QGYGLTE+T     T   E   K G +G + P  +AK++D D+ K+L  N+ GE+ +KGP +MKGY +NPEAT   +D EGWL TGD+ Y D++   FIVDRLK LIKYKGYQVPPAELE++LL HP I DA V   PD  AG+ P A VV E+G  ++E EVMD+VA QV+  KR+R  V FV  +PK  +GKI
Sbjct:  301 ELLNKYDLSNLVEIASGGAPLSKEVGEAVARRFNLPGVRQGYGLTETTSAIIITP--EGDDKPGASGKVVPLFKAKVIDLDTKKSLGPNRRGEVCVKGPMLMKGYVNNPEATKELIDEEGWLHTGDIGYYDEEKHFFIVDRLKSLIKYKGYQVPPAELESVLLQHPSIFDAGVAGVPDPVAGELPGAVVVLESGKNMTEKEVMDYVASQVSNAKRLRGGVRFVDEVPKGLTGKI 532          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: LUCI_LUCMI (Luciferin 4-monooxygenase OS=Luciola mingrelica PE=1 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 1.035e-58
Identity = 120/250 (48.00%), Postives = 166/250 (66.40%), Query Frame = -1
Query:  206 QIRSKYDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVR-RVAFVASIPKNPSGKI---LRKDLIKLATSKL 943
            ++  K+DLS+L  + SGGAPL++EV E   +++    + QGYGLTE+T     T   E   K G +G + P  + K++D D+ K L VN+ GE+ +KGPS+M GY +NPEAT  T+D EGWL TGD+ Y D+D   FIVDRLK LIKYKGYQVPPAELE++LL HP I DA V   PD +AG+ P A VV E G  ++E E++D+V  QV  +KR+R  V FV  +PK  +GKI   + ++++K   +K+
Sbjct:  301 ELIDKFDLSNLTEIASGGAPLAKEVGEAVARRFNLPGVRQGYGLTETTSAFIITP--EGDDKPGASGKVVPLFKVKVIDLDTKKTLGVNRRGEICVKGPSLMLGYSNNPEATRETIDEEGWLHTGDIGYYDEDEHFFIVDRLKSLIKYKGYQVPPAELESVLLQHPNIFDAGVAGVPDPDAGELPGAVVVMEKGKTMTEKEIVDYVNSQVVNHKRLRGGVRFVDEVPKGLTGKIDAKVIREILKKPQAKM 548          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: LUCI_LUCLA (Luciferin 4-monooxygenase OS=Luciola lateralis PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 3.011e-58
Identity = 123/250 (49.20%), Postives = 163/250 (65.20%), Query Frame = -1
Query:  206 QIRSKYDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVR-RVAFVASIPKNPSGKILRK---DLIKLATSKL 943
            ++  KYDLS+L  + SGGAPLS+E+ E   +++    + QGYGLTE+T     T   E   K G +G + P  +AK++D D+ K L  N+ GE+ +KGP +MKGY  NPEAT   +D EGWL TGD+ Y D++   FIVDRLK LIKYKGYQVPPAELE++LL HP I DA V   PD  AG+ P A VV E G  ++E EVMD+VA QV+  KR+R  V FV  +PK  +GKI  K   +++K   +K+
Sbjct:  301 ELLDKYDLSNLVEIASGGAPLSKEIGEAVARRFNLPGVRQGYGLTETTSAIIITP--EGDDKPGASGKVVPLFKAKVIDLDTKKTLGPNRRGEVCVKGPMLMKGYVDNPEATREIIDEEGWLHTGDIGYYDEEKHFFIVDRLKSLIKYKGYQVPPAELESVLLQHPNIFDAGVAGVPDPIAGELPGAVVVLEKGKSMTEKEVMDYVASQVSNAKRLRGGVRFVDEVPKGLTGKIDGKAIREILKKPVAKM 548          
The following BLAST results are available for this feature:
BLAST of CV884611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
4CLL3_ORYSJ4.488e-6250.224-coumarate--CoA ligase-like 3 OS=Oryza sativa sub... [more]
4CLL8_ORYSJ5.862e-6247.86Putative 4-coumarate--CoA ligase-like 8 OS=Oryza s... [more]
4CL5_ORYSJ1.706e-6149.79Probable 4-coumarate--CoA ligase 5 OS=Oryza sativa... [more]
4CL3_ARATH2.228e-6150.424-coumarate--CoA ligase 3 OS=Arabidopsis thaliana ... [more]
LUCI_PHOPY5.487e-6051.87Luciferin 4-monooxygenase OS=Photinus pyralis PE=1... [more]
4CLL9_ORYSJ1.596e-5948.354-coumarate--CoA ligase-like 9 OS=Oryza sativa sub... [more]
4CL4_ARATH2.085e-5949.584-coumarate--CoA ligase 4 OS=Arabidopsis thaliana ... [more]
LUCI_LUCCR4.645e-5951.71Luciferin 4-monooxygenase OS=Luciola cruciata PE=1... [more]
LUCI_LUCMI1.035e-5848.00Luciferin 4-monooxygenase OS=Luciola mingrelica PE... [more]
LUCI_LUCLA3.011e-5849.20Luciferin 4-monooxygenase OS=Luciola lateralis PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008E05_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T7_E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884611 ID=CV884611; Name=CV884611; organism=Citrus sinensis; type=EST; length=946bp
TGTGGCCCCTGTTTANCATATAGATCATTACAAGAAAAACAAAACATCTA
AATTTCAGTGACAAGGCAAAATATATATAAACCAGCATAACGGATTTTAG
TACAGCATAATTTTGCTACAGGCATAAACAAGATGTTGAATGAGAAATAG
AACCACTACTTCTCTGTTTGAGGCCCTCTCTTTGGGCAAAAGCCCCAGGC
ATTCAAAGTTTGGATGTCGCAAGCTTGATGAGATCCTTCCTGAGAATCTT
GCCTGATGGATTCTTGGGTATTGAAGCTACAAATGCCACTCTCCGAACCC
TCTTGTATGGGGCAACCTGTCTTGCTACAAAATCCATGACTTCATTCTCT
GATAATCGACTTCCAGCTTCCCGTACCACATATGCCATGGGATATTGCCC
AGCCTCCTTGTCAGGAAATGGTACGACAGCAGCATCAGAAATTTTTGGAT
GAGTTAGTAGCAAAGCCTCTAGTTCTGCTGGAGGGACCTGATAACCTTTG
TACTTGATCAGCTCCTTTAATCGATCAACAATAAAAATGAAGCCATCATC
ATCAATGTAGCAGAGATCTCCAGTTCTTAACCATCCTTCAGAATCAAGAG
TTGATGTTGTAGCTTCTGGATTACTGAAATAACCTTTCATGATGGATGGA
CCCTTAAGCCAAAGCTCACCCGTCTGATTCACCAACAACGCCTTGCCACT
GTCTGGGTCCACAATCTTCGCCTCCATGCTCGGCGACAGCATTCCCGCCG
TACCATACTTTCGACTCTCCTCCAACGAATCCGTTGACGCTCCAATGCCC
GTTGACTCGGTCAAACCATAACCCTGAAGAATCCTCACCTTTGGATATTT
CTGAACGAATCCTTCTATCACTTCCCTACTCAGCGGGGCCCCACCGGATA
AAACCGATTGCAGCGAACTCAAATCGTACTTTGACCGTATCTGATC
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