CV884611

Overview
NameCV884611
Unique NameCV884611
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length946
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: MYCC_BACSU (Mycosubtilin synthase subunit C OS=Bacillus subtilis GN=mycC PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.014e-13
Identity = 64/243 (26.34%), Postives = 108/243 (44.44%), Query Frame = -1
Query:  230 KYDLSSLQSVLSGGAPLSREVIEGF---VQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTL------DSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 931
            K  L+SL+ V + G  L+ + ++GF   +      +I+  YG TE+T I  S    E  ++Y +  +  P    ++    +G    V   GEL + G  + +GY + PE T            E   RTGDL     DG I  + R+   +K +GY++   E+EA L   P I ++ V+    +E  +         A   L+  E+ + ++RQ+  Y        +  +P   +GKI R+ L
Sbjct:  519 KRKLASLRYVFASGEALTPKHVDGFQRIITPVSHAQIINLYGPTEAT-IDVSYFECEADKRYNSVPIGKPISNIQLYILQAGYMQPVGVAGELCIAGDGLARGYLNRPELTAEKFVKNPFSAGERMYRTGDLARWLPDGNIEYLGRIDHQVKIRGYRIETGEVEAALFHIPSIQESIVLA---QEINEEISLCAYYTANDTLTAGELREHLSRQLPSYMIPAYFIQLKRMPLTLNGKIDRRAL 757          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: MBTM_MYCSS (Long-chain-fatty-acid--[acyl-carrier-protein] ligase mbtM OS=Mycobacterium sp. (strain MCS) GN=mbtM PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.014e-13
Identity = 71/261 (27.20%), Postives = 115/261 (44.06%), Query Frame = -1
Query:  230 YDLSSLQSVLSGGAPLSREVIEGFVQKYPKV-----RILQGYGLTEST--------GIGASTDSLEES-------RKYGTAGMLSPSMEAKIVDPD-SGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYP---MAYVVREAGSRLSENEVMDFVARQ--VAPYKRVRRVAFV--ASIPKNPSGKILRKDL 928
            +DL +L+  L+GG P+  +    F  +  +       ++  YGL ES+        G G   D ++ S       R +   G   P M+ +I   D SG+ +     GE+ ++G S+M GY   P      L++  W  TGDL Y  D G + +  R KELI   G  + PAE+E +      + + AVV     E+   P   +A   R      +  E++  VA +  V P      V F+   ++P+  SGK+ R ++
Sbjct:  262 FDLGALRFALNGGEPVDCQGYRRFATEMARFGLDPSALVPAYGLAESSCAVTVPILGSGLQVDEVQVSSDDGRFIRTHAVVGEPIPGMQVRIAPTDGSGEQVDGRDFGEIEVRGTSLMSGYLGEPP-----LEAGSWFPTGDLGYFVDSGLV-VCGRAKELITVAGRNIFPAEVERVAAQVQGVREGAVVAVGTDESAVRPGLVIAAEFRGTDEPAARTELVQRVASECGVVP----SNVVFLEPGALPRTSSGKLRRLEV 512          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: DLTA_LACLA (D-alanine--poly(phosphoribitol) ligase subunit 1 OS=Lactococcus lactis subsp. lactis GN=dltA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.014e-13
Identity = 62/234 (26.50%), Postives = 102/234 (43.59%), Query Frame = -1
Query:  230 GAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGAS---TDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTS---TLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVP-FPDKEAGQYPMAYVVRE------AGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 892
            G  L+++  E  +  +P   I   YG TE+TG  +S   T  L         G   P ++ KI+D             E+ + G S+ KGYF NPE T     T+D +    TGD   I  DG +    R+   +K+ G+++   ++EA +    +I  A V+P   D+      +AY+  E      A  R    E+   +++ +  Y    +  ++   P N +GK+ RK L
Sbjct:  270 GEELTKKTAEKLLTAFPSANIYNTYGPTEATGAISSVKITKELLTENDRVPIGFAKPGVDLKIMDK------------EIIIVGDSVAKGYFENPEKTEQAFFTVDGKPAYHTGDAGSISADGMLRYQGRIDFQVKFNGFRIELQDIEANIQNLKEIEKAVVLPKTNDQHKVTALIAYLETEKTFEDRAAERAFTKELKAELSKTIMDYMMPTKFVYLKKFPLNQNGKVDRKAL 491          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: ACSA_PSE14 (Acetyl-coenzyme A synthetase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=acsA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.014e-13
Identity = 41/129 (31.78%), Postives = 73/129 (56.59%), Query Frame = -1
Query:  209 GWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSE---NEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKLATSK 586
            G   TGD    D+DG+ +I  R+ +++   G+++  AE+E+ ++ HPK+++AAVV  P    GQ    YV    G   S+    E+ ++V +++ P      + +   +PK  SGKI+R+ L K+AT++
Sbjct:  494 GMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRMGTAEIESAMVAHPKVAEAAVVGVPHDLKGQGIYVYVTLNGGEEPSDALRTELRNWVRKEIGPIASPDFIQWAPGLPKTRSGKIMRRILRKIATAE 622          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: VRAA_STAEQ (Putative long chain fatty acid-CoA ligase vraA OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=vraA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.324e-13
Identity = 57/239 (23.85%), Postives = 118/239 (49.37%), Query Frame = -1
Query:  230 IRSKYDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYF--SNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 940
            I ++   SS++S+LS GA L+ +  +     YP+  +++ +G +E++ I  +     +S    + G L P +E ++++ D       +  G L ++   +  GY   SN E +        W++TGD  YI +   +F+V R  + I   G  V P  +E+L++    I +A V+  P  + G+  +A ++     +L+  ++  F+ +Q++  +   ++  +  +    SGKI RK++
Sbjct:  226 ISTQRHCSSIKSILSSGAKLTLQQFQQISTLYPQANLIEFFGTSEASFISYN---FNQSSPAHSVGKLFPHVETRLLNQDD------DAVGLLAVRSEMVFSGYVGQSNQEGS--------WIKTGDFAYIKNQ-HLFLVGRESDRIIVGGINVYPTAIESLIMDIEGIDEALVIGIPHAKFGE--IAILLYSGKVQLNYRQIKSFLMKQLSRQEVPSKLKKIDHMIYTESGKIARKEM 444          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: ACSL5_HUMAN (Long-chain-fatty-acid--CoA ligase 5 OS=Homo sapiens GN=ACSL5 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.324e-13
Identity = 48/147 (32.65%), Postives = 75/147 (51.02%), Query Frame = -1
Query:  467 VLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKY-KGYQVPPAELE 904
            +++G AP+S  V+  F +     ++ + YG TE TG    T +L      G  G+       K+ D        VN  GE+ +KG ++ KGY  +PE T   LDS+GWL TGD+     +G + I+DR K + K  +G  + P ++E
Sbjct:  416 IVTGAAPMSTSVMT-FFRAAMGCQVYEAYGQTECTG--GCTFTLPGDWTSGHVGVPLACNYVKLEDVADMNYFTVNNEGEVCIKGTNVFKGYLKDPEKTQEALDSDGWLHTGDIGRWLPNGTLKIIDRKKNIFKLAQGEYIAPEKIE 559          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: ACSA_SHEPA (Acetyl-coenzyme A synthetase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=acsA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.324e-13
Identity = 69/250 (27.60%), Postives = 120/250 (48.00%), Query Frame = -1
Query:  206 YDLSSLQSVLSGGAPLSREVIEGF--VQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWL--KGPSIMKGYFSNPEATTSTLDS--EGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSE---NEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKLATSKL 928
            +D SSL+ + S G P++ E    +  V  + K  I+  +  TE+ GI  S        K G+A      ++  +VD + G  +     G L +    P  M+  F + +    T      G   TGD    D+DG+ +I  R+ ++I   G+++  AE+E+ L+ H  +++AAVV +P    GQ   AYV    GS  +E    E+  +V +++        + +   +PK  SGKI+R+ L K+A +++
Sbjct:  375 FDGSSLRIMGSVGEPINPEAWRWYNDVIGHEKCPIVDTWWQTETGGILISPLPGATDTKPGSATRPFFGVQPALVD-NIGNIVEGANEGNLVILDSWPGQMRTVFGDHDRFVLTYFKTFRGMYFTGDGARRDEDGYYWITGRVDDVINVSGHRLGTAEVESALVAHELVAEAAVVGYPHDIKGQGIYAYVTLTKGSVETEELRQELRQWVRKEIGALATPDLIQWAGGLPKTRSGKIMRRFLRKIAANEV 623          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: ACSA_SHELP (Acetyl-coenzyme A synthetase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=acsA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.324e-13
Identity = 68/250 (27.20%), Postives = 121/250 (48.40%), Query Frame = -1
Query:  206 YDLSSLQSVLSGGAPLSREVIEGF--VQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWL--KGPSIMKGYFSNPE--ATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSE---NEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKLATSKL 928
            +D SSL+ + S G P++ E    +  V  +    I+  +  TE+ GI  S        K G+A      ++  +VD + G  +     G L +    P  M+  + + +  A T      G   TGD    D+DG+ +I  R+ ++I   G+++  AE+E+ L+ H  +++AAVV +P    GQ   AYV    G++ SE    E+  +V +++        + +   +PK  SGKI+R+ L K+A +++
Sbjct:  375 FDGSSLRIMGSVGEPINPEAWRWYHEVIGHENCPIVDTWWQTETGGILISPLPGATDTKPGSATRPFFGVQPALVD-NMGNIIDGAAEGNLVILDSWPGQMRTVYGDHDRFALTYFKTFRGMYFTGDGARRDEDGYYWITGRVDDVINVSGHRLGTAEVESALVAHEHVAEAAVVGYPHDIKGQGIYAYVTLTKGTQESEELRQELRQWVRKEIGALATPDLIQWAGGLPKTRSGKIMRRFLRKIAANEV 623          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: ACSA_PHOPR (Acetyl-coenzyme A synthetase OS=Photobacterium profundum GN=acsA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.324e-13
Identity = 71/244 (29.10%), Postives = 118/244 (48.36%), Query Frame = -1
Query:  215 SSLQSVLSGGAPLSREVIEGFVQKYPKVR--ILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWL--KGPSIMKGYFSNPEATTSTLDS--EGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAG---SRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKLAT 919
            SSL+ + S G P++ E  E +       R  I+  +  TE+ GI  +      + K G+A      ++  IVD + G  L     G L +    P  M+  + + E    T  S  +G   TGD    D+DG+ +I  R+ +++   G+++  AE+E+ L+   KI++AA+V  P    GQ   AY+    G   S     EV D+V +++ P      + +  ++PK  SGKI+R+ L K+AT
Sbjct:  378 SSLRIMGSVGEPINPEAWEWYHHTIGDSRCPIVDTWWQTETGGILITPLPGATALKPGSATRPFFGVQPAIVD-NMGNILEGVAEGNLVMVDSWPGQMRTLWGDHERFEQTYFSTFQGMYFTGDGARRDEDGYYWITGRVDDVLNISGHRMGTAEIESALVAFDKIAEAAIVGVPHDIKGQAIYAYITLNDGEIPSAELHKEVKDWVRKEIGPIATPDFLHWTDALPKTRSGKIMRRILRKIAT 620          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: FCSA_DICDI (Fatty acyl-CoA synthetase A OS=Dictyostelium discoideum GN=fcsA PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.729e-13
Identity = 52/164 (31.71%), Postives = 85/164 (51.83%), Query Frame = -1
Query:  425 VLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQT---GELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKY-KGYQVPPAELEALLLTHPKISDAAV 904
            +LSG APL  ++ E F++      ++ GYGL+E+ G GAS  +  E    G  G    + E K++D         ++    GE+ ++G ++ KGYF +PE T   L  +GW  TGD+   +++G + I+DR K + K  +G  V    LE++ +  P  S   V
Sbjct:  389 ILSGSAPLDPKLAE-FLRACFCCPVVSGYGLSENVG-GASV-AYPEDNNVGHVGPPLSACEMKLIDVPEMNYFSTDKPCPRGEVCIRGFNVFKGYFKDPEKTKEDLKEDGWFHTGDIGRWNENGTLSIIDRKKNIFKLSQGEYVAAEYLESVFVRSPFASQVFV 549          
The following BLAST results are available for this feature:
BLAST of CV884611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MYCC_BACSU1.014e-1326.34Mycosubtilin synthase subunit C OS=Bacillus subtil... [more]
MBTM_MYCSS1.014e-1327.20Long-chain-fatty-acid--[acyl-carrier-protein] liga... [more]
DLTA_LACLA1.014e-1326.50D-alanine--poly(phosphoribitol) ligase subunit 1 O... [more]
ACSA_PSE141.014e-1331.78Acetyl-coenzyme A synthetase OS=Pseudomonas syring... [more]
VRAA_STAEQ1.324e-1323.85Putative long chain fatty acid-CoA ligase vraA OS=... [more]
ACSL5_HUMAN1.324e-1332.65Long-chain-fatty-acid--CoA ligase 5 OS=Homo sapien... [more]
ACSA_SHEPA1.324e-1327.60Acetyl-coenzyme A synthetase OS=Shewanella pealean... [more]
ACSA_SHELP1.324e-1327.20Acetyl-coenzyme A synthetase OS=Shewanella loihica... [more]
ACSA_PHOPR1.324e-1329.10Acetyl-coenzyme A synthetase OS=Photobacterium pro... [more]
FCSA_DICDI1.729e-1331.71Fatty acyl-CoA synthetase A OS=Dictyostelium disco... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008E05_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T7_E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884611 ID=CV884611; Name=CV884611; organism=Citrus sinensis; type=EST; length=946bp
TGTGGCCCCTGTTTANCATATAGATCATTACAAGAAAAACAAAACATCTA
AATTTCAGTGACAAGGCAAAATATATATAAACCAGCATAACGGATTTTAG
TACAGCATAATTTTGCTACAGGCATAAACAAGATGTTGAATGAGAAATAG
AACCACTACTTCTCTGTTTGAGGCCCTCTCTTTGGGCAAAAGCCCCAGGC
ATTCAAAGTTTGGATGTCGCAAGCTTGATGAGATCCTTCCTGAGAATCTT
GCCTGATGGATTCTTGGGTATTGAAGCTACAAATGCCACTCTCCGAACCC
TCTTGTATGGGGCAACCTGTCTTGCTACAAAATCCATGACTTCATTCTCT
GATAATCGACTTCCAGCTTCCCGTACCACATATGCCATGGGATATTGCCC
AGCCTCCTTGTCAGGAAATGGTACGACAGCAGCATCAGAAATTTTTGGAT
GAGTTAGTAGCAAAGCCTCTAGTTCTGCTGGAGGGACCTGATAACCTTTG
TACTTGATCAGCTCCTTTAATCGATCAACAATAAAAATGAAGCCATCATC
ATCAATGTAGCAGAGATCTCCAGTTCTTAACCATCCTTCAGAATCAAGAG
TTGATGTTGTAGCTTCTGGATTACTGAAATAACCTTTCATGATGGATGGA
CCCTTAAGCCAAAGCTCACCCGTCTGATTCACCAACAACGCCTTGCCACT
GTCTGGGTCCACAATCTTCGCCTCCATGCTCGGCGACAGCATTCCCGCCG
TACCATACTTTCGACTCTCCTCCAACGAATCCGTTGACGCTCCAATGCCC
GTTGACTCGGTCAAACCATAACCCTGAAGAATCCTCACCTTTGGATATTT
CTGAACGAATCCTTCTATCACTTCCCTACTCAGCGGGGCCCCACCGGATA
AAACCGATTGCAGCGAACTCAAATCGTACTTTGACCGTATCTGATC
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