CV884611

Overview
NameCV884611
Unique NameCV884611
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length946
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: AAS_SALPC (Bifunctional protein aas OS=Salmonella paratyphi C (strain RKS4594) GN=aas PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.572e-13
Identity = 66/237 (27.85%), Postives = 105/237 (44.30%), Query Frame = -1
Query:  248 YDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYF--------SNPEATTSTLDSE-GWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRV-RRVAFVASIPKNPSGK 928
            YD   L+ V++G   L     + +  K+  +RIL+GYG+TE   + +   ++  + K GT G + P M+A+++         +   G L LKGP+IM GY           P A  +  ++E GW  TGD+   D++GF+ I  R K   K  G  V    +E L L        A     D   G+   A V+    S L+  ++  +      P   V R + ++  +P   SGK
Sbjct:  476 YDFYRLRYVVAGAEKLQESTKQLWQDKFG-LRILEGYGVTECAPVVSI--NVPMAAKPGTVGRILPGMDARLLAVPG-----IENGGRLQLKGPNIMNGYLRVEKPGVLEVPSAENARGETERGWYDTGDIVRFDENGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSAEKMHATAIKSDASKGE---ALVLFTTDSELTREKLQHYAREHGIPELAVPRDIRYLKQLPLLGSGK 701          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: AAS_SALPB (Bifunctional protein aas OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=aas PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.572e-13
Identity = 66/237 (27.85%), Postives = 105/237 (44.30%), Query Frame = -1
Query:  248 YDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYF--------SNPEATTSTLDSE-GWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRV-RRVAFVASIPKNPSGK 928
            YD   L+ V++G   L     + +  K+  +RIL+GYG+TE   + +   ++  + K GT G + P M+A+++         +   G L LKGP+IM GY           P A  +  ++E GW  TGD+   D++GF+ I  R K   K  G  V    +E L L        A     D   G+   A V+    S L+  ++  +      P   V R + ++  +P   SGK
Sbjct:  476 YDFYRLRYVVAGAEKLQESTKQLWQDKFG-LRILEGYGVTECAPVVSI--NVPMAAKPGTVGRILPGMDARLLAVPG-----IENGGRLQLKGPNIMNGYLRVEKPGVLEVPSAENARGETERGWYDTGDIVRFDENGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSADKMHATAIKSDASKGE---ALVLFTTDSELTREKLQHYAREHGIPELAVPRDIRYLKQLPLLGSGK 701          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: AAS_SALPA (Bifunctional protein aas OS=Salmonella paratyphi A GN=aas PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.572e-13
Identity = 66/237 (27.85%), Postives = 105/237 (44.30%), Query Frame = -1
Query:  248 YDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYF--------SNPEATTSTLDSE-GWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRV-RRVAFVASIPKNPSGK 928
            YD   L+ V++G   L     + +  K+  +RIL+GYG+TE   + +   ++  + K GT G + P M+A+++         +   G L LKGP+IM GY           P A  +  ++E GW  TGD+   D++GF+ I  R K   K  G  V    +E L L        A     D   G+   A V+    S L+  ++  +      P   V R + ++  +P   SGK
Sbjct:  476 YDFYRLRYVVAGAEKLQESTKQLWQDKFG-LRILEGYGVTECAPVVSI--NVPMAAKPGTVGRILPGMDARLLAVPG-----IENGGRLQLKGPNIMNGYLRVEKPGVLEVPSAENARGETERGWYDTGDIVRFDENGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSADKMHATAIKSDASKGE---ALVLFTTDSELTREKLQHYAREHGIPELAVPRDIRYLKQLPLLGSGK 701          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: AAS_SALHS (Bifunctional protein aas OS=Salmonella heidelberg (strain SL476) GN=aas PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.572e-13
Identity = 66/237 (27.85%), Postives = 105/237 (44.30%), Query Frame = -1
Query:  248 YDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYF--------SNPEATTSTLDSE-GWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRV-RRVAFVASIPKNPSGK 928
            YD   L+ V++G   L     + +  K+  +RIL+GYG+TE   + +   ++  + K GT G + P M+A+++         +   G L LKGP+IM GY           P A  +  ++E GW  TGD+   D++GF+ I  R K   K  G  V    +E L L        A     D   G+   A V+    S L+  ++  +      P   V R + ++  +P   SGK
Sbjct:  476 YDFYRLRYVVAGAEKLQESTKQLWQDKFG-LRILEGYGVTECAPVVSI--NVPMAAKPGTVGRILPGMDARLLAVPG-----IENGGRLQLKGPNIMNGYLRVEKPGVLEVPSAENARGETERGWYDTGDIVRFDENGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSADKMHATAIKSDASKGE---ALVLFTTDSELTREKLQHYAREHGIPELAVPRDIRYLKQLPLLGSGK 701          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: AAS_SALG2 (Bifunctional protein aas OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=aas PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.572e-13
Identity = 66/237 (27.85%), Postives = 105/237 (44.30%), Query Frame = -1
Query:  248 YDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYF--------SNPEATTSTLDSE-GWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRV-RRVAFVASIPKNPSGK 928
            YD   L+ V++G   L     + +  K+  +RIL+GYG+TE   + +   ++  + K GT G + P M+A+++         +   G L LKGP+IM GY           P A  +  ++E GW  TGD+   D++GF+ I  R K   K  G  V    +E L L        A     D   G+   A V+    S L+  ++  +      P   V R + ++  +P   SGK
Sbjct:  476 YDFYRLRYVVAGAEKLQESTKQLWQDKFG-LRILEGYGVTECAPVVSI--NVPMAAKPGTVGRILPGMDARLLAVPG-----IENGGRLQLKGPNIMNGYLRVEKPGVLEVPSAENARGETERGWYDTGDIVRFDENGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSADKMHATAIKSDASKGE---ALVLFTTDSELTREKLQHYAREHGIPELAVPRDIRYLKQLPLLGSGK 701          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: AAS_SALEP (Bifunctional protein aas OS=Salmonella enteritidis PT4 (strain P125109) GN=aas PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.572e-13
Identity = 66/237 (27.85%), Postives = 105/237 (44.30%), Query Frame = -1
Query:  248 YDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYF--------SNPEATTSTLDSE-GWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRV-RRVAFVASIPKNPSGK 928
            YD   L+ V++G   L     + +  K+  +RIL+GYG+TE   + +   ++  + K GT G + P M+A+++         +   G L LKGP+IM GY           P A  +  ++E GW  TGD+   D++GF+ I  R K   K  G  V    +E L L        A     D   G+   A V+    S L+  ++  +      P   V R + ++  +P   SGK
Sbjct:  476 YDFYRLRYVVAGAEKLQESTKQLWQDKFG-LRILEGYGVTECAPVVSI--NVPMAAKPGTVGRILPGMDARLLAVPG-----IENGGRLQLKGPNIMNGYLRVEKPGVLEVPSAENARGETERGWYDTGDIVRFDENGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSADKMHATAIKSDASKGE---ALVLFTTDSELTREKLQHYAREHGIPELAVPRDIRYLKQLPLLGSGK 701          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: AAS_SALCH (Bifunctional protein aas OS=Salmonella choleraesuis GN=aas PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.572e-13
Identity = 66/237 (27.85%), Postives = 105/237 (44.30%), Query Frame = -1
Query:  248 YDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYF--------SNPEATTSTLDSE-GWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRV-RRVAFVASIPKNPSGK 928
            YD   L+ V++G   L     + +  K+  +RIL+GYG+TE   + +   ++  + K GT G + P M+A+++         +   G L LKGP+IM GY           P A  +  ++E GW  TGD+   D++GF+ I  R K   K  G  V    +E L L        A     D   G+   A V+    S L+  ++  +      P   V R + ++  +P   SGK
Sbjct:  476 YDFYRLRYVVAGAEKLQESTKQLWQDKFG-LRILEGYGVTECAPVVSI--NVPMAAKPGTVGRILPGMDARLLAVPG-----IENGGRLQLKGPNIMNGYLRVEKPGVLEVPSAENARGETERGWYDTGDIVRFDENGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSAEKMHATAIKSDASKGE---ALVLFTTDSELTREKLQHYAREHGIPELAVPRDIRYLKQLPLLGSGK 701          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: AAS_SALA4 (Bifunctional protein aas OS=Salmonella agona (strain SL483) GN=aas PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.572e-13
Identity = 66/237 (27.85%), Postives = 105/237 (44.30%), Query Frame = -1
Query:  248 YDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYF--------SNPEATTSTLDSE-GWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRV-RRVAFVASIPKNPSGK 928
            YD   L+ V++G   L     + +  K+  +RIL+GYG+TE   + +   ++  + K GT G + P M+A+++         +   G L LKGP+IM GY           P A  +  ++E GW  TGD+   D++GF+ I  R K   K  G  V    +E L L        A     D   G+   A V+    S L+  ++  +      P   V R + ++  +P   SGK
Sbjct:  476 YDFYRLRYVVAGAEKLQESTKQLWQDKFG-LRILEGYGVTECAPVVSI--NVPMAAKPGTVGRILPGMDARLLAVPG-----IENGGRLQLKGPNIMNGYLRVEKPGVLEVPSAENARGETERGWYDTGDIVRFDENGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSADKMHATAIKSDASKGE---ALVLFTTDSELTREKLQHYAREHGIPELAVPRDIRYLKQLPLLGSGK 701          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: ACSA_WOLSU (Acetyl-coenzyme A synthetase OS=Wolinella succinogenes GN=acsA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.583e-13
Identity = 62/255 (24.31%), Postives = 124/255 (48.63%), Query Frame = -1
Query:  218 KYDLSSLQSVLSGGAPLSREVIEGFVQKYP--KVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGP--SIMKGYFSNPEA------TTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAG--SRLSE-----NEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKLA 931
            KY+LS+L+ + + G P++ +    +  +    +  I+  +  TE+ G   S        K G A +  P + A+++D + G      + G L +  P  S+++  + +P+       +T   + +     GD    D+ G+I I  R+ ++I   G+++  AE+E+ +  HP +++ AVV   D+  G+   A++V + G    ++E      E+   + R++ P  +   + FV  +PK  SGKI+R+ L  +A
Sbjct:  376 KYNLSNLKVLGTVGEPINPDAWNWYYNEIGGGQCPIVDTWWQTETGGHMISPLPGATPIKPGCATLPLPGIFAEVID-EEGNPKPAGEQGYLCITKPWPSMIRNIWGDPKRYESSYFSTCKKNGKPVYFAGDGAIRDERGYITITGRMDDVINVSGHRLGTAEIESAIAKHPGVAETAVVSRLDEIKGESVYAFIVLKPGYEDNVAEELQLLKEINAVITREIGPLAKADTMLFVPGLPKTRSGKIMRRILRSIA 629          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: ACSA_SHEFN (Acetyl-coenzyme A synthetase OS=Shewanella frigidimarina (strain NCIMB 400) GN=acsA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.583e-13
Identity = 69/254 (27.17%), Postives = 120/254 (47.24%), Query Frame = -1
Query:  206 SKYDLSSLQSVLSGGAPLSREVIEGF--VQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWL----KGPSIMKGYFSNPE--ATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSE---NEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKLATSKL 934
            S Y   SL+ + S G P++ E    +  V  +    I+  +  TE+ GI  S        K G+A      ++  +VD       +V  TGE  L      P  M+  + + +  A T      G   TGD    D+DG+ +I  R+ ++I   G+++  AE+E+ L++H  +++AAVV +P    GQ   AYV    G   +E    E+  +V +++        + + + +PK  SGKI+R+ L K+A +++
Sbjct:  373 SSYKGDSLRIMGSVGEPINPEAWRWYHEVIGHENCPIVDTWWQTETGGILISPLPGATDTKPGSATRPFFGVQPALVD---NMGDIVEGTGEGNLVILDSWPGQMRTVYGDHDRFALTYFKTFRGMYFTGDGARRDEDGYYWITGRVDDVINVSGHRLGTAEVESALVSHELVAEAAVVGYPHDIKGQGIYAYVTLTRGIEPTEELRQELRQWVRKEIGALATPDLIQWASGLPKTRSGKIMRRFLRKIAANEV 623          
The following BLAST results are available for this feature:
BLAST of CV884611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AAS_SALPC6.572e-1327.85Bifunctional protein aas OS=Salmonella paratyphi C... [more]
AAS_SALPB6.572e-1327.85Bifunctional protein aas OS=Salmonella paratyphi B... [more]
AAS_SALPA6.572e-1327.85Bifunctional protein aas OS=Salmonella paratyphi A... [more]
AAS_SALHS6.572e-1327.85Bifunctional protein aas OS=Salmonella heidelberg ... [more]
AAS_SALG26.572e-1327.85Bifunctional protein aas OS=Salmonella gallinarum ... [more]
AAS_SALEP6.572e-1327.85Bifunctional protein aas OS=Salmonella enteritidis... [more]
AAS_SALCH6.572e-1327.85Bifunctional protein aas OS=Salmonella choleraesui... [more]
AAS_SALA46.572e-1327.85Bifunctional protein aas OS=Salmonella agona (stra... [more]
ACSA_WOLSU8.583e-1324.31Acetyl-coenzyme A synthetase OS=Wolinella succinog... [more]
ACSA_SHEFN8.583e-1327.17Acetyl-coenzyme A synthetase OS=Shewanella frigidi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008E05_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T7_E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884611 ID=CV884611; Name=CV884611; organism=Citrus sinensis; type=EST; length=946bp
TGTGGCCCCTGTTTANCATATAGATCATTACAAGAAAAACAAAACATCTA
AATTTCAGTGACAAGGCAAAATATATATAAACCAGCATAACGGATTTTAG
TACAGCATAATTTTGCTACAGGCATAAACAAGATGTTGAATGAGAAATAG
AACCACTACTTCTCTGTTTGAGGCCCTCTCTTTGGGCAAAAGCCCCAGGC
ATTCAAAGTTTGGATGTCGCAAGCTTGATGAGATCCTTCCTGAGAATCTT
GCCTGATGGATTCTTGGGTATTGAAGCTACAAATGCCACTCTCCGAACCC
TCTTGTATGGGGCAACCTGTCTTGCTACAAAATCCATGACTTCATTCTCT
GATAATCGACTTCCAGCTTCCCGTACCACATATGCCATGGGATATTGCCC
AGCCTCCTTGTCAGGAAATGGTACGACAGCAGCATCAGAAATTTTTGGAT
GAGTTAGTAGCAAAGCCTCTAGTTCTGCTGGAGGGACCTGATAACCTTTG
TACTTGATCAGCTCCTTTAATCGATCAACAATAAAAATGAAGCCATCATC
ATCAATGTAGCAGAGATCTCCAGTTCTTAACCATCCTTCAGAATCAAGAG
TTGATGTTGTAGCTTCTGGATTACTGAAATAACCTTTCATGATGGATGGA
CCCTTAAGCCAAAGCTCACCCGTCTGATTCACCAACAACGCCTTGCCACT
GTCTGGGTCCACAATCTTCGCCTCCATGCTCGGCGACAGCATTCCCGCCG
TACCATACTTTCGACTCTCCTCCAACGAATCCGTTGACGCTCCAATGCCC
GTTGACTCGGTCAAACCATAACCCTGAAGAATCCTCACCTTTGGATATTT
CTGAACGAATCCTTCTATCACTTCCCTACTCAGCGGGGCCCCACCGGATA
AAACCGATTGCAGCGAACTCAAATCGTACTTTGACCGTATCTGATC
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