CV884611

Overview
NameCV884611
Unique NameCV884611
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length946
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: LCFA_ECO57 (Long-chain-fatty-acid--CoA ligase OS=Escherichia coli O157:H7 GN=fadD PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.742e-35
Identity = 89/240 (37.08%), Postives = 138/240 (57.50%), Query Frame = -1
Query:  206 DLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKLATSKL 925
            D SSL     GG P+ + V E +V K     +L+GYGLTE   +  S +  +     G+ G+  PS EAK+VD D  + +   Q GEL ++GP +M GY+  P+AT   + + GWL TGD+  +D++GF+ IVDR K++I   G+ V P E+E +++ HP + + A V  P   +G+    +VV++  S L+E  ++ F  RQ+  YK  + V F   +PK+  GKILR++L   A  K+
Sbjct:  323 DFSSLHLSAGGGMPVQQVVAERWV-KLTGQYLLEGYGLTECAPL-VSVNPYDIDYHSGSIGLPVPSTEAKLVDDDDNE-VSPGQPGELCVRGPQVMLGYWQRPDATDEIIKN-GWLHTGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKDPS-LTEESLVTFCRRQLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARGKV 557          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: MENE_BACC7 (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain AH187) GN=menE PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.581e-35
Identity = 80/233 (34.33%), Postives = 140/233 (60.09%), Query Frame = -1
Query:  221 SSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKL 919
            SSL+ +L GG P  + ++E  V+K   + + Q YG+TE++    +  +     K G+AG   P  + ++     G  +     GE+ +KGP++  GYF+  +AT  T+ + GWL TGDL Y+D++GF++++DR  +LI   G  + PA++E +LL+HP +++A VV   D + GQ P A+VV+     ++E E++ F   ++A YK  ++  F+  +P+N S K+LR++L +L
Sbjct:  252 SSLRCMLLGGGPAPKPILETCVEK--GIPVYQTYGMTETSSQICTLSADYMLTKVGSAG--KPLFQCRLRIEKDGVVVPAFTEGEIVVKGPNVTGGYFNREDATRETIQN-GWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPAVAEAGVVGMTDDKWGQVPAAFVVK--SGEVTEEEIIHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELRQL 477          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: YDAB_BACSU (Putative acyl--CoA ligase ydaB OS=Bacillus subtilis GN=ydaB PE=3 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 6.108e-35
Identity = 86/234 (36.75%), Postives = 135/234 (57.69%), Query Frame = -1
Query:  224 DLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIK 925
            DLSSL  +++GG  +   +I  ++     + +  GYG TE+ GI   T  +    K  +AG     ++ K+ DP +G+ L   + GE+ +  P + KGY  NPEAT   L + GW RTGD  Y+D+DGFIFI  R K++I Y G  V P ++E ++   P I + AVV  PD   G+ P A++V+  G R++E +V+ F   +++ YK +  V FV  +PKN  GK+ +KD+++
Sbjct:  270 DLSSLVILMTGGTKVPSSLISRYLDI--GIPLAHGYGSTEAWGISTWTPDMGMD-KAASAGKPVAGVKVKVEDPLTGEELPQGEIGEIVVHTPFLFKGYEDNPEATAKVLQN-GWFRTGDSGYVDEDGFIFITGRYKDVIIYGGDNVYPDQVEEVIQQIPGILETAVVGIPDPLYGEKPKAFIVKNGGQRITEEDVIAFCKERLSAYK-IPEVEFVNELPKNNLGKV-KKDVLR 497          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: MENE_BACCQ (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain Q1) GN=menE PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 6.108e-35
Identity = 80/233 (34.33%), Postives = 140/233 (60.09%), Query Frame = -1
Query:  221 SSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKL 919
            SSL+ +L GG P  + ++E  V+K   + + Q YG+TE++    +  +     K G+AG   P  + ++     G  +     GE+ +KGP++  GYF+  +AT  T+ + GWL TGDL Y+D++GF++++DR  +LI   G  + PA++E +LL+HP +++A VV   D + GQ P A+VV+     ++E E++ F   ++A YK  ++  F+  +P+N S K+LR++L +L
Sbjct:  252 SSLRCMLLGGGPAPKPLLETCVEK--GIPVYQTYGMTETSSQICTLSADYMLTKVGSAG--KPLFQCQLRIEKDGVVVPAFTEGEIVVKGPNVTGGYFNREDATRETIQN-GWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPAVAEAGVVGMTDDKWGQVPAAFVVK--SGEVTEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELRQL 477          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: MENE_BACCR (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=menE PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 7.978e-35
Identity = 80/233 (34.33%), Postives = 140/233 (60.09%), Query Frame = -1
Query:  221 SSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKL 919
            SSL+ +L GG P  + ++E  V+K   + + Q YG+TE++    +  +     K G+AG   P  + ++     G  +     GE+ +KGP++  GYF+  +AT  T+ + GWL TGDL Y+D++GF++++DR  +LI   G  + PA++E +LL+HP +++A VV   D + GQ P A+VV+     ++E E++ F   ++A YK  ++  F+  +P+N S K+LR++L +L
Sbjct:  253 SSLRCMLLGGGPAPKPLLEACVEK--GIPVYQTYGMTETSSQICTLSADYMLTKVGSAG--KPLFQCQLRIEKDGVVVPPLVEGEIVVKGPNVTGGYFNREDATRETIQN-GWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPAVAEAGVVGMSDDKWGQVPAAFVVKSGA--VTEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELRQL 478          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: MENE_BACCZ (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain ZK / E33L) GN=menE PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.042e-34
Identity = 79/232 (34.05%), Postives = 140/232 (60.34%), Query Frame = -1
Query:  221 SLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKL 916
            SL+ +L GG P  + ++E  V+K  ++ + Q YG+TE++    +  +     K G+AG   P  + ++     G  +     GE+ +KGP++  GYF+  +AT  T+ + GWL TGDL Y+D++GF++++DR  +LI   G  + PA++E +LL+HP +++A VV   D + GQ P A+VV+     ++E E++ F   ++A YK  ++  F+  +P+N S K+LR++L +L
Sbjct:  254 SLRCMLLGGGPAPKPLLEACVEK--RIPVYQTYGMTETSSQICTLSADYMLMKVGSAG--KPLFQCQLRIEKDGVVVPPFAEGEIVVKGPNVTGGYFNREDATRETIQN-GWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVVK--SGEITEEEILHFCEEKLAKYKVPKKAWFLEELPRNASKKLLRRELRQL 478          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: MENE_BACC1 (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain ATCC 10987) GN=menE PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.042e-34
Identity = 79/233 (33.91%), Postives = 141/233 (60.52%), Query Frame = -1
Query:  221 SSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKL 919
            SSL+ +L GG P  + ++E  V+K   + + Q YG+TE++    +  +     K G+AG   P  + ++     G  +     GE+ +KGP++  GYF+  +AT  T+ + GWL TGD+ Y+D++GF++++DR  +LI   G  + PA++E +LL+HP +++A VV   D + GQ P+A+VV+     ++E E++ F   ++A YK  ++  F+  +P+N S K+LR++L +L
Sbjct:  252 SSLRCMLLGGGPAPKPLLETCVEK--GIPVYQTYGMTETSSQICTLSADYMLTKVGSAG--KPLFQCQLRIEKDGVVVPAFTEGEIVVKGPNVTGGYFNREDATRETIQN-GWLHTGDIGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPAVAEAGVVGMTDDKWGQVPVAFVVK--SGEVTEEEIIHFCEAKLAKYKVPKKACFLEELPRNASKKLLRRELRQL 477          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: MENE_BACC0 (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain AH820) GN=menE PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.361e-34
Identity = 80/233 (34.33%), Postives = 139/233 (59.66%), Query Frame = -1
Query:  221 SSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKL 919
            SSL+ +L GG P  + ++E  V K   + + Q YG+TE++    +  +     K G+AG   P  + ++     G  +     GE+ +KGP++  GYF+  +AT  T+ + GWL TGDL Y+D++GF++++DR  +LI   G  + PA++E +LL+HP +++A VV   D + GQ P A+VV+     ++E E++ F   ++A YK  ++  F+  +P+N S K+LR++L +L
Sbjct:  253 SSLRCMLLGGGPAPKPLLETCVDK--GIPVYQTYGMTETSSQICTLSADYMLTKVGSAG--KPLFQCQLRIEKDGVVVPPFAEGEIVVKGPNVTGGYFNREDATRETIQN-GWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVVK--SGEITEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELRQL 478          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: MENE_BACHK (2-succinylbenzoate--CoA ligase OS=Bacillus thuringiensis subsp. konkukian GN=menE PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.777e-34
Identity = 80/233 (34.33%), Postives = 139/233 (59.66%), Query Frame = -1
Query:  221 SSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKL 919
            SSL+ +L GG P  + ++E  V K   + + Q YG+TE++    +  +     K G+AG   P  + ++     G  +     GE+ +KGP++  GYF+  +AT  T+ + GWL TGDL Y+D++GF++++DR  +LI   G  + PA++E +LL+HP +++A VV   D + GQ P A+VV+     ++E E++ F   ++A YK  ++  F+  +P+N S K+LR++L +L
Sbjct:  253 SSLRCMLLGGGPAPKPLLETCVDK--GIPVYQTYGMTETSSQICTLSADYMLTKVGSAG--KPLFQCQLRIEKDGVVVPPFAEGEIVVKGPNVTGGYFNREDATRETIQN-GWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVVK--SGEVTEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELRQL 478          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: MENE_BACAH (2-succinylbenzoate--CoA ligase OS=Bacillus thuringiensis (strain Al Hakam) GN=menE PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.777e-34
Identity = 80/233 (34.33%), Postives = 139/233 (59.66%), Query Frame = -1
Query:  221 SSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKL 919
            SSL+ +L GG P  + ++E  V K   + + Q YG+TE++    +  +     K G+AG   P  + ++     G  +     GE+ +KGP++  GYF+  +AT  T+ + GWL TGDL Y+D++GF++++DR  +LI   G  + PA++E +LL+HP +++A VV   D + GQ P A+VV+     ++E E++ F   ++A YK  ++  F+  +P+N S K+LR++L +L
Sbjct:  253 SSLRCMLLGGGPAPKPLLETCVDK--GIPVYQTYGMTETSSQICTLSADYMLTKVGSAG--KPLFQCQLRIEKDGVVVPPFVEGEIVVKGPNVTGGYFNREDATRETIQN-GWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVVK--SGEITEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELRQL 478          
The following BLAST results are available for this feature:
BLAST of CV884611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
LCFA_ECO572.742e-3537.08Long-chain-fatty-acid--CoA ligase OS=Escherichia c... [more]
MENE_BACC73.581e-3534.332-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
YDAB_BACSU6.108e-3536.75Putative acyl--CoA ligase ydaB OS=Bacillus subtili... [more]
MENE_BACCQ6.108e-3534.332-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACCR7.978e-3534.332-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACCZ1.042e-3434.052-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACC11.042e-3433.912-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACC01.361e-3434.332-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACHK1.777e-3434.332-succinylbenzoate--CoA ligase OS=Bacillus thuring... [more]
MENE_BACAH1.777e-3434.332-succinylbenzoate--CoA ligase OS=Bacillus thuring... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008E05_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T7_E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884611 ID=CV884611; Name=CV884611; organism=Citrus sinensis; type=EST; length=946bp
TGTGGCCCCTGTTTANCATATAGATCATTACAAGAAAAACAAAACATCTA
AATTTCAGTGACAAGGCAAAATATATATAAACCAGCATAACGGATTTTAG
TACAGCATAATTTTGCTACAGGCATAAACAAGATGTTGAATGAGAAATAG
AACCACTACTTCTCTGTTTGAGGCCCTCTCTTTGGGCAAAAGCCCCAGGC
ATTCAAAGTTTGGATGTCGCAAGCTTGATGAGATCCTTCCTGAGAATCTT
GCCTGATGGATTCTTGGGTATTGAAGCTACAAATGCCACTCTCCGAACCC
TCTTGTATGGGGCAACCTGTCTTGCTACAAAATCCATGACTTCATTCTCT
GATAATCGACTTCCAGCTTCCCGTACCACATATGCCATGGGATATTGCCC
AGCCTCCTTGTCAGGAAATGGTACGACAGCAGCATCAGAAATTTTTGGAT
GAGTTAGTAGCAAAGCCTCTAGTTCTGCTGGAGGGACCTGATAACCTTTG
TACTTGATCAGCTCCTTTAATCGATCAACAATAAAAATGAAGCCATCATC
ATCAATGTAGCAGAGATCTCCAGTTCTTAACCATCCTTCAGAATCAAGAG
TTGATGTTGTAGCTTCTGGATTACTGAAATAACCTTTCATGATGGATGGA
CCCTTAAGCCAAAGCTCACCCGTCTGATTCACCAACAACGCCTTGCCACT
GTCTGGGTCCACAATCTTCGCCTCCATGCTCGGCGACAGCATTCCCGCCG
TACCATACTTTCGACTCTCCTCCAACGAATCCGTTGACGCTCCAATGCCC
GTTGACTCGGTCAAACCATAACCCTGAAGAATCCTCACCTTTGGATATTT
CTGAACGAATCCTTCTATCACTTCCCTACTCAGCGGGGCCCCACCGGATA
AAACCGATTGCAGCGAACTCAAATCGTACTTTGACCGTATCTGATC
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