CV884611

Overview
NameCV884611
Unique NameCV884611
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length946
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: MENE_BACAN (2-succinylbenzoate--CoA ligase OS=Bacillus anthracis GN=menE PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.959e-34
Identity = 79/233 (33.91%), Postives = 138/233 (59.23%), Query Frame = -1
Query:  221 SSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKL 919
            SS + +L GG P  + ++E  V K   + + Q YG+TE++    +  +     K G+AG   P  + ++     G  +     GE+ +KGP++  GYF+  +AT  T+ + GWL TGDL Y+D++GF++++DR  +LI   G  + PA++E +LL+HP +++A VV   D + GQ P A+VV+     ++E E++ F   ++A YK  ++  F+  +P+N S K+LR++L +L
Sbjct:  252 SSFRCMLLGGGPAPKPLLETCVDK--GIPVYQTYGMTETSSQICTLSADYMLTKVGSAG--KPLFQCQLRIEKDGVVVPPFAEGEIVVKGPNVTGGYFNREDATRETIQN-GWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVVK--SGEITEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELRQL 477          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: MENE_BACAC (2-succinylbenzoate--CoA ligase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=menE PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.959e-34
Identity = 79/233 (33.91%), Postives = 138/233 (59.23%), Query Frame = -1
Query:  221 SSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKL 919
            SS + +L GG P  + ++E  V K   + + Q YG+TE++    +  +     K G+AG   P  + ++     G  +     GE+ +KGP++  GYF+  +AT  T+ + GWL TGDL Y+D++GF++++DR  +LI   G  + PA++E +LL+HP +++A VV   D + GQ P A+VV+     ++E E++ F   ++A YK  ++  F+  +P+N S K+LR++L +L
Sbjct:  253 SSFRCMLLGGGPAPKPLLETCVDK--GIPVYQTYGMTETSSQICTLSADYMLTKVGSAG--KPLFQCQLRIEKDGVVVPPFAEGEIVVKGPNVTGGYFNREDATRETIQN-GWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVVK--SGEITEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELRQL 478          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: MENE_BACAA (2-succinylbenzoate--CoA ligase OS=Bacillus anthracis (strain A0248) GN=menE PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.959e-34
Identity = 79/233 (33.91%), Postives = 138/233 (59.23%), Query Frame = -1
Query:  221 SSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKL 919
            SS + +L GG P  + ++E  V K   + + Q YG+TE++    +  +     K G+AG   P  + ++     G  +     GE+ +KGP++  GYF+  +AT  T+ + GWL TGDL Y+D++GF++++DR  +LI   G  + PA++E +LL+HP +++A VV   D + GQ P A+VV+     ++E E++ F   ++A YK  ++  F+  +P+N S K+LR++L +L
Sbjct:  253 SSFRCMLLGGGPAPKPLLETCVDK--GIPVYQTYGMTETSSQICTLSADYMLTKVGSAG--KPLFQCQLRIEKDGVVVPPFAEGEIVVKGPNVTGGYFNREDATRETIQN-GWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVVK--SGEITEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELRQL 478          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: LCFA_SALTY (Long-chain-fatty-acid--CoA ligase OS=Salmonella typhimurium GN=fadD PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.959e-34
Identity = 86/240 (35.83%), Postives = 136/240 (56.67%), Query Frame = -1
Query:  206 DLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKLATSKL 925
            D SSL     GG P+   V E +V K     +L+GYGLTE   +  S +  +     G+ G+  PS EAK+VD D  + +   + GEL +KGP +M GY+  P+AT   +  +GWL TGD+  +D+DGF+ IVDR K++I   G+ V P E+E +++ H  + + A V  P   +G+    +VV++    L+++ ++ F  R +  YK  ++V F   +PK+  GKILR++L   A  K+
Sbjct:  323 DFSSLHLSAGGGMPVQNVVAERWV-KLTGQYLLEGYGLTECAPL-VSVNPHDIDYHSGSIGLPVPSTEAKLVDDDDNE-VAPGEAGELCVKGPQVMLGYWQRPDATDEII-KDGWLHTGDIAVMDEDGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHSGVQEVAAVGVPSGSSGEAVKLFVVKK-DPALTDDALITFCRRHLTGYKVPKQVEFREELPKSNVGKILRRELRDEARGKV 557          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: LCFA_SALTI (Long-chain-fatty-acid--CoA ligase OS=Salmonella typhi GN=fadD PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.959e-34
Identity = 86/240 (35.83%), Postives = 136/240 (56.67%), Query Frame = -1
Query:  206 DLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKLATSKL 925
            D SSL     GG P+   V E +V K     +L+GYGLTE   +  S +  +     G+ G+  PS EAK+VD D  + +   + GEL +KGP +M GY+  P+AT   +  +GWL TGD+  +D+DGF+ IVDR K++I   G+ V P E+E +++ H  + + A V  P   +G+    +VV++    L+++ ++ F  R +  YK  ++V F   +PK+  GKILR++L   A  K+
Sbjct:  323 DFSSLHLSAGGGMPVQNVVAERWV-KLTGQYLLEGYGLTECAPL-VSVNPHDIDYHSGSIGLPVPSTEAKLVDDDDNE-VAPGEAGELCVKGPQVMLGYWQRPDATDEII-KDGWLHTGDIAVMDEDGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHSGVQEVAAVGVPSGSSGEAVKLFVVKK-DPALTDDALITFCRRHLTGYKVPKQVEFREELPKSNVGKILRRELRDEARGKV 557          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: MENE_BACWK (2-succinylbenzoate--CoA ligase OS=Bacillus weihenstephanensis (strain KBAB4) GN=menE PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 6.754e-34
Identity = 80/233 (34.33%), Postives = 138/233 (59.23%), Query Frame = -1
Query:  221 SSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKL 919
            SSL+ +L GG P  + ++E  V+K   + + Q YG+TE++    +  +     K G+AG   P  + ++     G  +     GE+ +KGP++  GYF+  +AT   + + GWL TGDL Y+D++GF++++DR  +LI   G  + PA++E +LL+HP + +A VV   D+  GQ P A+VV+     ++E E++ F   ++A YK  ++  F+  +P+N S K+LR++L KL
Sbjct:  252 SSLRCMLLGGGPAPKPLLETCVEK--GIPVYQTYGMTETSSQICTLTADYMLTKVGSAG--KPLFQCQLRIEKDGVVVPPRAEGEIVVKGPNVTGGYFNREDATHEAIRN-GWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPAVVEAGVVGMADESWGQVPAAFVVKSGD--VTEEEIIRFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELRKL 477          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: MENE_GEOKA (2-succinylbenzoate--CoA ligase OS=Geobacillus kaustophilus GN=menE PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.821e-34
Identity = 81/232 (34.91%), Postives = 132/232 (56.90%), Query Frame = -1
Query:  221 SLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKL 916
            + + +L GG P  R ++E   +K   + + Q YG+TE+    A+        K G+AG   P   A++     GK    ++ GE+ +KGP++ KGY+  PEAT   +   GW  TGD+ Y+D+DGF++++DR  +LI   G  V PAE+EA+LL+HP + +A V    ++  GQ P A+V  + G+   E  +  F   ++A YK   R+ FV  +P+N + K+LR++L +L
Sbjct:  256 TFRCMLLGGGPAPRPLLEACKEK--GIPVYQTYGMTETASQIATLAPEYSLTKLGSAG--KPLFPAELCILKDGKPAAPHEAGEIVVKGPNVTKGYWQRPEATAQAIRG-GWFFTGDIGYLDEDGFLYVLDRRSDLIISGGENVYPAEVEAVLLSHPDVEEAGVTGVENETWGQVPYAFVRLKRGASPDEAALRAFCRERLAKYKVPARIYFVDELPRNAAQKLLRRELKRL 482          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: MENE_BACLD (2-succinylbenzoate--CoA ligase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=menE PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.152e-33
Identity = 83/229 (36.24%), Postives = 131/229 (57.21%), Query Frame = -1
Query:  230 SLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 916
            SL+ +L GG P    ++E   +K  ++ ++Q YG+TE+    A+        K G+AG   P   + I    +G      + GE+ +KGP++MKGY  N EA      ++GW +TGD+ Y DDDGF++++DR  +LI   G  + PAE+EA+LL+HP +++A V    DK  G+ P AY+V  A S + E E+ +F   ++A YK  +   FV  +P+N S K++R  L
Sbjct:  257 SLRCLLLGGGPAPLSLLEECKRK--RLPVVQSYGMTETCSQIATLAPEYSIEKLGSAG--KPLFASSIKIEKNGTECQPGEHGEITVKGPTVMKGYLKN-EAANKDSFNDGWFKTGDIGYFDDDGFLYVLDRRSDLIISGGENIYPAEVEAVLLSHPNVAEAGVKGVDDKTWGKVPHAYLV--ADSPVDEEELSEFCKERLASYKVPKAFHFVDRLPRNASNKLMRHKL 478          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: LCFA_YERPE (Long-chain-fatty-acid--CoA ligase OS=Yersinia pestis GN=fadD PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.152e-33
Identity = 83/233 (35.62%), Postives = 139/233 (59.66%), Query Frame = -1
Query:  230 DLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKY-GTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 925
            D S+L+  + GG P+ + V E +     K  +L+GYGLTE + +   T +  + + Y G+ G+  PS + ++ D D G  + + + GELW++GP +M GY+  P+AT   L  +GWL TGD+  +D+DGF+ IVDR K++I   G+ V P E+E ++  H K+ ++AV+  P++ +G+    +VV+   S L+  E++    R +  YK  + V F   +PK+  GKILR++L
Sbjct:  323 DFSTLRLSVGGGMPVQKAVAEKWETLTGK-HLLEGYGLTECSPL--VTGNPYDLKHYSGSIGLPVPSTDVRLRD-DDGNDVELGKPGELWVRGPQVMLGYWQRPDATDDVL-KDGWLATGDIATMDEDGFLRIVDRKKDMILVSGFNVYPNEIEEVVALHAKVLESAVIGVPNEVSGEAVKVFVVKNDAS-LTPEELLTHCRRYLTGYKVPKIVEFRDELPKSNVGKILRREL 549          
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: FADK_ECOLI (Short-chain-fatty-acid--CoA ligase OS=Escherichia coli (strain K12) GN=fadK PE=1 SV=3)

HSP 1 Score: 140.969 bits (354), Expect = 9.752e-33
Identity = 92/243 (37.86%), Postives = 131/243 (53.91%), Query Frame = -1
Query:  215 DLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSR-LSENEVMDFVAR-QVAPYKRVRRVAFVASIPKNPSGKI----LRKDLIKLAT 925
            DLS+L+  L GG  + ++V     Q+   +++L  YG TES+           SR   T G  +  +E K+VD D+ K L     GE   +GP++  GYF  PE T   LD EGW  +GDLC +D+ G+I I  R K++I   G  +   E+E +LL HPKI DA VV   D+  G+   AYVV +A    LS  EV+ F +R +VA YK    +  +  +P+  SGKI    LRKD+++  T
Sbjct:  301 DLSALRFFLCGGTTIPKKVARECQQR--GIKLLSVYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVD-DARKTLPPGCEGEEASRGPNVFMGYFDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDACVVAMSDERLGERSCAYVVLKAPHHSLSLEEVVAFFSRKRVAKYKYPEHIVVIEKLPRTTSGKIQKFLLRKDIMRRLT 540          
The following BLAST results are available for this feature:
BLAST of CV884611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MENE_BACAN3.959e-3433.912-succinylbenzoate--CoA ligase OS=Bacillus anthrac... [more]
MENE_BACAC3.959e-3433.912-succinylbenzoate--CoA ligase OS=Bacillus anthrac... [more]
MENE_BACAA3.959e-3433.912-succinylbenzoate--CoA ligase OS=Bacillus anthrac... [more]
LCFA_SALTY3.959e-3435.83Long-chain-fatty-acid--CoA ligase OS=Salmonella ty... [more]
LCFA_SALTI3.959e-3435.83Long-chain-fatty-acid--CoA ligase OS=Salmonella ty... [more]
MENE_BACWK6.754e-3434.332-succinylbenzoate--CoA ligase OS=Bacillus weihens... [more]
MENE_GEOKA8.821e-3434.912-succinylbenzoate--CoA ligase OS=Geobacillus kaus... [more]
MENE_BACLD1.152e-3336.242-succinylbenzoate--CoA ligase OS=Bacillus licheni... [more]
LCFA_YERPE1.152e-3335.62Long-chain-fatty-acid--CoA ligase OS=Yersinia pest... [more]
FADK_ECOLI9.752e-3337.86Short-chain-fatty-acid--CoA ligase OS=Escherichia ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008E05_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T7_E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884611 ID=CV884611; Name=CV884611; organism=Citrus sinensis; type=EST; length=946bp
TGTGGCCCCTGTTTANCATATAGATCATTACAAGAAAAACAAAACATCTA
AATTTCAGTGACAAGGCAAAATATATATAAACCAGCATAACGGATTTTAG
TACAGCATAATTTTGCTACAGGCATAAACAAGATGTTGAATGAGAAATAG
AACCACTACTTCTCTGTTTGAGGCCCTCTCTTTGGGCAAAAGCCCCAGGC
ATTCAAAGTTTGGATGTCGCAAGCTTGATGAGATCCTTCCTGAGAATCTT
GCCTGATGGATTCTTGGGTATTGAAGCTACAAATGCCACTCTCCGAACCC
TCTTGTATGGGGCAACCTGTCTTGCTACAAAATCCATGACTTCATTCTCT
GATAATCGACTTCCAGCTTCCCGTACCACATATGCCATGGGATATTGCCC
AGCCTCCTTGTCAGGAAATGGTACGACAGCAGCATCAGAAATTTTTGGAT
GAGTTAGTAGCAAAGCCTCTAGTTCTGCTGGAGGGACCTGATAACCTTTG
TACTTGATCAGCTCCTTTAATCGATCAACAATAAAAATGAAGCCATCATC
ATCAATGTAGCAGAGATCTCCAGTTCTTAACCATCCTTCAGAATCAAGAG
TTGATGTTGTAGCTTCTGGATTACTGAAATAACCTTTCATGATGGATGGA
CCCTTAAGCCAAAGCTCACCCGTCTGATTCACCAACAACGCCTTGCCACT
GTCTGGGTCCACAATCTTCGCCTCCATGCTCGGCGACAGCATTCCCGCCG
TACCATACTTTCGACTCTCCTCCAACGAATCCGTTGACGCTCCAATGCCC
GTTGACTCGGTCAAACCATAACCCTGAAGAATCCTCACCTTTGGATATTT
CTGAACGAATCCTTCTATCACTTCCCTACTCAGCGGGGCCCCACCGGATA
AAACCGATTGCAGCGAACTCAAATCGTACTTTGACCGTATCTGATC
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