CV884611
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: CAIC_ECO24 (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=caiC PE=3 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 3.137e-31 Identity = 83/221 (37.56%), Postives = 121/221 (54.75%), Query Frame = -1 Query: 230 LSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKG---PSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 883 LS + + F +++ VR+L YG+TE T +G D + R++ + G EA+I D D + L + GE+ +KG +I K YF NP+AT L+++GWL TGD Y D++GF + VDR +IK G V ELE ++ THPKI D VV D + A+VV G LSE E F + +A +K + +P+N SGKI+RK+L Sbjct: 299 LSEQEKDAFCERFG-VRLLTSYGMTE-TIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRD-DHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYCDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNL 516
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: CAIC_ECOL6 (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O6 GN=caiC PE=3 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 4.097e-31 Identity = 83/221 (37.56%), Postives = 121/221 (54.75%), Query Frame = -1 Query: 230 LSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKG---PSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 883 LS + + F +++ VR+L YG+TE T +G D + R++ + G EA+I D D + L + GE+ +KG +I K YF NP+AT L+++GWL TGD Y D++GF + VDR +IK G V ELE ++ THPKI D VV D + A+VV G LSE E F + +A +K + +P+N SGKI+RK+L Sbjct: 299 LSEQEKDAFCERF-SVRLLTSYGMTE-TIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRD-DHNRPLPAGELGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFCFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNL 516
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: CAIC_ECOL5 (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=caiC PE=3 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 4.097e-31 Identity = 83/221 (37.56%), Postives = 121/221 (54.75%), Query Frame = -1 Query: 230 LSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKG---PSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 883 LS + + F +++ VR+L YG+TE T +G D + R++ + G EA+I D D + L + GE+ +KG +I K YF NP+AT L+++GWL TGD Y D++GF + VDR +IK G V ELE ++ THPKI D VV D + A+VV G LSE E F + +A +K + +P+N SGKI+RK+L Sbjct: 299 LSEQEKDAFCERF-SVRLLTSYGMTE-TIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRD-DHNRPLPAGELGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFCFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNL 516
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: CAIC_ECO8A (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O8 (strain IAI1) GN=caiC PE=3 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 4.097e-31 Identity = 83/221 (37.56%), Postives = 121/221 (54.75%), Query Frame = -1 Query: 230 LSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKG---PSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 883 LS + + F +++ VR+L YG+TE T +G D + R++ + G EA+I D D + L + GE+ +KG +I K YF NP+AT L+++GWL TGD Y D++GF + VDR +IK G V ELE ++ THPKI D VV D + A+VV G LSE E F + +A +K + +P+N SGKI+RK+L Sbjct: 299 LSEQEKDAFCERFG-VRLLTSYGMTE-TIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRD-DHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYCDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVVNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNL 516
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: CAIC_ECO81 (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O81 (strain ED1a) GN=caiC PE=3 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 4.097e-31 Identity = 83/221 (37.56%), Postives = 121/221 (54.75%), Query Frame = -1 Query: 230 LSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKG---PSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 883 LS + + F +++ VR+L YG+TE T +G D + R++ + G EA+I D D + L + GE+ +KG +I K YF NP+AT L+++GWL TGD Y D++GF + VDR +IK G V ELE ++ THPKI D VV D + A+VV G LSE E F + +A +K + +P+N SGKI+RK+L Sbjct: 299 LSEQEKDAFCERFG-VRLLTSYGMTE-TIVGIIGDRPGDKRRWPSIGRAGFCYEAEICD-DHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFCFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNL 516
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: CAIC_ECOUT (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli (strain UTI89 / UPEC) GN=caiC PE=3 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 6.989e-31 Identity = 83/221 (37.56%), Postives = 121/221 (54.75%), Query Frame = -1 Query: 230 LSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKG---PSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 883 LS + + F +++ VR+L YG+TE T +G D + R++ + G EA+I D D + L + GE+ +KG +I K YF NP+AT L+++GWL TGD Y D++GF + VDR +IK G V ELE ++ THPKI D VV D + A+VV G LSE E F + +A +K + +P+N SGKI+RK+L Sbjct: 299 LSEQEKDAFCERFG-VRLLTSYGMTE-TIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRD-DHNRPLPAGELGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFCFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNL 516
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: CAIC_ECOSM (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=caiC PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 6.989e-31 Identity = 83/221 (37.56%), Postives = 121/221 (54.75%), Query Frame = -1 Query: 230 LSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKG---PSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 883 LS + + F +++ VR+L YG+TE T +G D + R++ + G EA+I D D + L + GE+ +KG +I K YF NP+AT L+++GWL TGD Y D++GF + VDR +IK G V ELE ++ THPKI D VV D + A+VV G LSE E F + +A +K + +P+N SGKI+RK+L Sbjct: 299 LSAQEKDAFCERFG-VRLLTSYGMTE-TIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRD-DHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNL 516
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: CAIC_ECOK1 (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O1:K1 / APEC GN=caiC PE=3 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 6.989e-31 Identity = 83/221 (37.56%), Postives = 121/221 (54.75%), Query Frame = -1 Query: 230 LSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKG---PSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 883 LS + + F +++ VR+L YG+TE T +G D + R++ + G EA+I D D + L + GE+ +KG +I K YF NP+AT L+++GWL TGD Y D++GF + VDR +IK G V ELE ++ THPKI D VV D + A+VV G LSE E F + +A +K + +P+N SGKI+RK+L Sbjct: 299 LSEQEKDAFCERFG-VRLLTSYGMTE-TIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRD-DHNRPLPAGELGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFCFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNL 516
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: CAIC_ECOLC (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=caiC PE=3 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 9.128e-31 Identity = 82/221 (37.10%), Postives = 121/221 (54.75%), Query Frame = -1 Query: 230 LSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKG---PSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 883 LS + + F +++ VR+L YG+TE T +G D + R++ + G + EA+I D D + L + GE+ +KG +I K YF NP+AT L+++GWL TGD Y D++GF + VDR +IK G V ELE ++ HPKI D VV D + A+VV G LSE E F + +A +K + +P+N SGKI+RK+L Sbjct: 299 LSEQEKDAFCERFG-VRLLTSYGMTE-TIVGIIGDRPGDKRRWPSIGRVGFCYEAEIRD-DHNRPLPAGEIGEICIKGIPGKTIFKEYFLNPQATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIAAHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNL 516
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: ACSF2_DANRE (Acyl-CoA synthetase family member 2, mitochondrial OS=Danio rerio GN=acsf2 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 9.128e-31 Identity = 79/238 (33.19%), Postives = 127/238 (53.36%), Query Frame = -1 Query: 230 SKYDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGI---GASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 934 +K+DLSS++ ++ G+P EV+ + ++ GYG TE++ + G DS E RK T G +SP EAK+VDP +G+ + + GEL ++G +M Y+ + E T + + W +TGD+ +D + I R+K+LI G + PAE+E L THPKI +A VV D+ G+ A + + G + E+ + ++A YK R + FV P +GKI + L Sbjct: 361 AKFDLSSVRGGIAAGSPCPPEVMRKILNVMGIKEMVIGYGTTENSPVTFCGFPVDSAE--RKIVTVGCISPHTEAKVVDPTTGEIVPLGAQGELMIRGYCVMLEYWQDEEKTRECITKDRWYKTGDIASLDQFAYCKIEGRIKDLIIRGGENIYPAEIEQFLHTHPKILEAQVVGVKDERMGEEVCACIRLKEGQECTVEEIKAYCKGKIAHYKVPRYILFVQDYPLTITGKIQKHKL 596 The following BLAST results are available for this feature:
BLAST of CV884611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884611 ID=CV884611; Name=CV884611; organism=Citrus sinensis; type=EST; length=946bpback to top |