CV884611
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: CAIC_ECOLU (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=caiC PE=3 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 1.192e-30 Identity = 82/221 (37.10%), Postives = 120/221 (54.30%), Query Frame = -1 Query: 230 LSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKG---PSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 883 LS + + F +++ VR+L YG+TE T +G D + R++ + G EA+I D D + L + GE+ +KG +I K YF NP+AT L+++GWL TGD Y D++GF + VDR +IK G V ELE ++ HPKI D VV D + A+VV G LSE E F + +A +K + +P+N SGKI+RK+L Sbjct: 299 LSEQEKDAFCERF-SVRLLTSYGMTE-TIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRD-DHNRPLPAGELGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIAAHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNL 516
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: CAIC_ECO5E (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=caiC PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.656e-30 Identity = 81/221 (36.65%), Postives = 121/221 (54.75%), Query Frame = -1 Query: 230 LSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKG---PSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 883 LS + + F +++ VR+L YG+TE T +G D + R++ + G +A+I D D + L + GE+ +KG +I K YF NP+AT L+++GWL TGD Y D++GF + +DR +IK G V ELE ++ THPKI D VV D + A+VV G LSE E F + +A +K + +P+N SGKI+RK+L Sbjct: 299 LSEQEKDTFCERFG-VRLLTSYGMTE-TIVGIIGDRPGDKRRWPSIGRAGFCYDAEIRD-DHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFIDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNL 516
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: CAIC_ECO57 (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O157:H7 GN=caiC PE=3 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 2.656e-30 Identity = 81/221 (36.65%), Postives = 121/221 (54.75%), Query Frame = -1 Query: 230 LSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKG---PSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 883 LS + + F +++ VR+L YG+TE T +G D + R++ + G +A+I D D + L + GE+ +KG +I K YF NP+AT L+++GWL TGD Y D++GF + +DR +IK G V ELE ++ THPKI D VV D + A+VV G LSE E F + +A +K + +P+N SGKI+RK+L Sbjct: 299 LSEQEKDTFCERFG-VRLLTSYGMTE-TIVGIIGDRPGDKRRWPSIGRAGFCYDAEIRD-DHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFIDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNL 516
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: CAIC_SALTY (Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella typhimurium GN=caiC PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.469e-30 Identity = 81/221 (36.65%), Postives = 119/221 (53.85%), Query Frame = -1 Query: 230 LSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKG---PSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 883 LS + + F +++ VR+L YG+TE T +G D + R++ + G + S EA+I D D + L + GE+ +KG +I K Y+ PEAT L+ EGWL TGD Y D+DG+ + VDR +IK G V ELE ++ HPKI D VV D + A++V G LSE E F +A +K + +P+N SGKI++K+L Sbjct: 299 LSEQEKDDFTERFG-VRLLTSYGMTE-TIVGIIGDRPGDKRRWPSIGRVGFSYEAEIRD-DQNRPLPAGEIGEICIKGIPGKTIFKEYYMQPEATAKALEPEGWLHTGDSGYQDEDGYFYFVDRRCNMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNEGETLSEAEFFSFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNL 516
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: CAIC_SALPC (Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella paratyphi C (strain RKS4594) GN=caiC PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.469e-30 Identity = 81/221 (36.65%), Postives = 119/221 (53.85%), Query Frame = -1 Query: 230 LSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKG---PSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 883 LS + + F +++ VR+L YG+TE T +G D + R++ + G + S EA+I D D + L + GE+ +KG +I K Y+ PEAT L+ EGWL TGD Y D+DG+ + VDR +IK G V ELE ++ HPKI D VV D + A++V G LSE E F +A +K + +P+N SGKI++K+L Sbjct: 299 LSAQEKDAFTERFG-VRLLTSYGMTE-TIVGIIGDRPGDKRRWPSIGRVGFSYEAEIRD-DQNRPLPAGEIGEICIKGIPGKTIFKEYYMQPEATAGALEPEGWLHTGDSGYQDEDGYFYFVDRRCNMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNEGETLSEAEFFSFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNL 516
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: CAIC_SALHS (Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella heidelberg (strain SL476) GN=caiC PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.469e-30 Identity = 81/221 (36.65%), Postives = 119/221 (53.85%), Query Frame = -1 Query: 230 LSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKG---PSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 883 LS + + F +++ VR+L YG+TE T +G D + R++ + G + S EA+I D D + L + GE+ +KG +I K Y+ PEAT L+ EGWL TGD Y D+DG+ + VDR +IK G V ELE ++ HPKI D VV D + A++V G LSE E F +A +K + +P+N SGKI++K+L Sbjct: 299 LSEQEKDDFTERFG-VRLLTSYGMTE-TIVGIIGDRPGDKRRWPSIGRVGFSYEAEIRD-DQNRPLPAGEIGEICIKGIPGKTIFKEYYMQPEATAKALEPEGWLHTGDSGYQDEDGYFYFVDRRCNMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNEGETLSEAEFFSFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNL 516
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: CAIC_SALCH (Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella choleraesuis GN=caiC PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.469e-30 Identity = 81/221 (36.65%), Postives = 119/221 (53.85%), Query Frame = -1 Query: 230 LSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKG---PSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 883 LS + + F +++ VR+L YG+TE T +G D + R++ + G + S EA+I D D + L + GE+ +KG +I K Y+ PEAT L+ EGWL TGD Y D+DG+ + VDR +IK G V ELE ++ HPKI D VV D + A++V G LSE E F +A +K + +P+N SGKI++K+L Sbjct: 299 LSAQEKDAFTERFG-VRLLTSYGMTE-TIVGIIGDRPGDKRRWPSIGRVGFSYEAEIRD-DQNRPLPAGEIGEICIKGIPGKTIFKEYYMQPEATAGALEPEGWLHTGDSGYQDEDGYFYFVDRRCNMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNEGETLSEAEFFSFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNL 516
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: CAIC_ESCF3 (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=caiC PE=3 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 3.469e-30 Identity = 82/221 (37.10%), Postives = 120/221 (54.30%), Query Frame = -1 Query: 230 LSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKG---PSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 883 LS + + F +++ VR+L YG+TE T +G D + R++ + G EA+I D D + L + GE+ +KG +I K YF NP+AT L+++GWL TGD Y D++GF + VDR +IK G V ELE ++ HPKI D VV D + A+VV G LSE E +F + +A +K + +P+N SGKI+RK L Sbjct: 299 LSEQEKDAFCERFG-VRLLTSYGMTE-TIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRD-DHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPQATARVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIAAHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGEILSEEEFFNFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKAL 516
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: CAIC_ECO45 (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=caiC PE=3 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 3.469e-30 Identity = 82/221 (37.10%), Postives = 120/221 (54.30%), Query Frame = -1 Query: 230 LSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKG---PSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 883 LS + + F +++ V +L YG+TE T +G D + R++ + G EA+I D D + L + GE+ +KG +I K YF NP+AT L+++GWL TGD Y D++GF + VDR +IK G V ELE ++ THPKI D VV D + A+VV G LSE E F + +A +K + +P+N SGKI+RK+L Sbjct: 299 LSEQEKDAFCERFG-VSLLTSYGMTE-TIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRD-DHNRPLPAGELGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFCFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNL 516
BLAST of CV884611 vs. ExPASy Swiss-Prot
Match: ACSF2_RAT (Acyl-CoA synthetase family member 2, mitochondrial OS=Rattus norvegicus GN=Acsf2 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.469e-30 Identity = 75/233 (32.19%), Postives = 125/233 (53.65%), Query Frame = -1 Query: 245 SKYDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTES---TGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKI 934 S YD ++++ + G+ E+I + K ++ YG TE+ T + D+LE+ K G+ G + P EA+IV+ ++G+ +N GEL ++G +M+GY+ P+ T T+ + W RTGD+ +D+ GF IV R K++I G + PAELE HP++ +A VV D G+ A + ++G +E E+ F +++ +K R + FV P SGKI Sbjct: 370 SSYDFTTIRGGVIAGSLAPPELIRAIISKMNMKELVVVYGTTENSPVTFMNFPEDTLEQ--KAGSVGRIMPHTEAQIVNMETGELTKLNMPGELCIRGYCVMQGYWGEPQKTFETVGQDRWYRTGDIASMDEQGFCRIVGRSKDMIIRGGENIYPAELEDFFHKHPQVQEAQVVGVKDDRMGEEICACIRLKSGETTTEEEIKAFCKGKISHFKIPRYIVFVEGYPLTVSGKI 600 The following BLAST results are available for this feature:
BLAST of CV884611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884611 ID=CV884611; Name=CV884611; organism=Citrus sinensis; type=EST; length=946bpback to top |