CV884609

Overview
NameCV884609
Unique NameCV884609
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA13_ORYSJ (Auxin-responsive protein IAA13 OS=Oryza sativa subsp. japonica GN=IAA13 PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.531e-54
Identity = 134/254 (52.76%), Postives = 151/254 (59.45%), Query Frame = 3
Query:  150 TELRLGLPXXXXXXXXXXXXXXXXXXXXXXXXXXMKRGFADTVVDLKLNLSTK-----ESGGIDVIQKTKGKSASATGATDLSKPPA-KAQVVGWPPVRSFRKNIMAVQ----KDNEEGDNK-----AXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 866
            TELRLGLP                           KRGF +T+ DLKL L T       +G  +     K K  +   A D  KPPA KAQ VGWPPVRSFR+NIM VQ    K  EE D +     A      + AFVKVSMDGAPYLRKVDLK+Y SY++LS AL KMF +FT          + MNE      +NGSD V TYEDKDGDWMLVGDVPW MFV+SCKRLRIMKGSEAIGLAPRA +K KN+S
Sbjct:   10 TELRLGLPGGGGGAAEAAAKAA-------------KRGFEETI-DLKLKLPTAGMEEAAAGKAEAPAAEKAKRPAEAAAADAEKPPAPKAQAVGWPPVRSFRRNIMTVQSVKSKKEEEADKQQQQPAANASGSNSSAFVKVSMDGAPYLRKVDLKMYNSYKDLSLALQKMFGTFTATG-------NNMNE------VNGSDAVTTYEDKDGDWMLVGDVPWQMFVESCKRLRIMKGSEAIGLAPRAKDKYKNKS 236          
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA13_ORYSI (Auxin-responsive protein IAA13 OS=Oryza sativa subsp. indica GN=IAA13 PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.531e-54
Identity = 134/254 (52.76%), Postives = 151/254 (59.45%), Query Frame = 3
Query:  150 TELRLGLPXXXXXXXXXXXXXXXXXXXXXXXXXXMKRGFADTVVDLKLNLSTK-----ESGGIDVIQKTKGKSASATGATDLSKPPA-KAQVVGWPPVRSFRKNIMAVQ----KDNEEGDNK-----AXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 866
            TELRLGLP                           KRGF +T+ DLKL L T       +G  +     K K  +   A D  KPPA KAQ VGWPPVRSFR+NIM VQ    K  EE D +     A      + AFVKVSMDGAPYLRKVDLK+Y SY++LS AL KMF +FT          + MNE      +NGSD V TYEDKDGDWMLVGDVPW MFV+SCKRLRIMKGSEAIGLAPRA +K KN+S
Sbjct:   10 TELRLGLPGGGGGAAEAAAKAA-------------KRGFEETI-DLKLKLPTAGMEEAAAGKAEAPAAEKAKRPAEAAAADAEKPPAPKAQAVGWPPVRSFRRNIMTVQSVKSKKEEEADKQQQQPAANASGSNSSAFVKVSMDGAPYLRKVDLKMYNSYKDLSLALQKMFGTFTATG-------NNMNE------VNGSDAVTTYEDKDGDWMLVGDVPWQMFVESCKRLRIMKGSEAIGLAPRAKDKYKNKS 236          
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA11_ORYSJ (Auxin-responsive protein IAA11 OS=Oryza sativa subsp. japonica GN=IAA11 PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 2.142e-53
Identity = 128/266 (48.12%), Postives = 152/266 (57.14%), Query Frame = 3
Query:  135 INFEATELRLGLPXXXXXXXXXXXXXXXXXXXXXXXXXXMKRGFADTVVDLKLNLSTKESGGID-----------------------VIQKTKGKSASATGATDLSKPPA-KAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKN 860
            + F+ TELRLGLP                           KRGFA+T+ DLKL L       +                         ++++  +S+  T   D  KP A KAQVVGWPPVRSFRKN++A +                  A VKVSMDGAPYLRK+D+ +YKSY ELS A   MF+SFTIG CGS   +     +KL D L   +YVPTYEDKDGDWMLVGDVPW+MFV+SCKRLRIMKGSEAIGLAPRAVEKCK+
Sbjct:    4 LGFDETELRLGLPGAGELAARSSG----------------KRGFAETI-DLKLKLQPAAPAAVSGEEGAQEDKEDADAAAAAADEKMSMKRSASQSSVVTAEPDPDKPRAPKAQVVGWPPVRSFRKNVLAEK--------------CKAAALVKVSMDGAPYLRKIDVAMYKSYPELSMAFQNMFTSFTIGKCGSH--QQLKESNKLRDDL---EYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAVEKCKS 233          
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA17_ORYSJ (Auxin-responsive protein IAA17 OS=Oryza sativa subsp. japonica GN=IAA17 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 4.623e-48
Identity = 117/255 (45.88%), Postives = 146/255 (57.25%), Query Frame = 3
Query:  138 NFEATELRLGLPXXXXXXXXXXXXXXXXXXXXXXXXXXMKRGFADTVVDLKLNLSTKESGGIDVIQKTKGKSASATGATDLSK------------PPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 866
            + + TELRLGLP                           KRGF+D    L  + +   + G       KGK A+A    + ++            P AKAQVVGWPP+RS+RKN MA  +     ++ A         +VKVSMDGAPYLRKVDLK YK+Y++LS AL KMF  FT G       KD ++ES+        +YV TYEDKDGDWMLVGDVPW+MF +SC+RLRIMKGS+AIGLAPRAV+K KNR+
Sbjct:   27 DLKGTELRLGLPGSHSPDRSPPAATLDLLPAAKGA----KRGFSDEARPLPASAAAAAAAG-------KGKKAAAGEEDEDAEEEDKKVAAAPQAPAAKAQVVGWPPIRSYRKNTMATNQLKSSKED-AEAKQGQGFLYVKVSMDGAPYLRKVDLKTYKNYKDLSTALEKMFIGFTTG-------KDGLSESR-----KDGEYVLTYEDKDGDWMLVGDVPWEMFANSCRRLRIMKGSDAIGLAPRAVDKSKNRN 257          
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA3_ORYSJ (Auxin-responsive protein IAA3 OS=Oryza sativa subsp. japonica GN=IAA3 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 5.651e-46
Identity = 96/164 (58.54%), Postives = 116/164 (70.73%), Query Frame = 3
Query:  384 KPPAKAQVVGWPPVRSFRKNIMA---VQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 866
            +P AKAQVVGWPP+RS+RKN MA   ++ + E+ D K          +VKVSMDGAPYLRKVDLK YK+Y+++S  L KMF  F+ G  G++  KD              +YV TYEDKDGDWMLVGDVPW+MF DSC+RLRIMKGS+AIGLAPRA EK KNR+
Sbjct:  117 QPAAKAQVVGWPPIRSYRKNTMATNQIKSNKEDVDAKQGQ----GFLYVKVSMDGAPYLRKVDLKTYKNYKDMSLGLEKMFIGFSTGKEGAENQKD-------------GEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSDAIGLAPRAGEKSKNRN 263          
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA19_ORYSJ (Auxin-responsive protein IAA19 OS=Oryza sativa subsp. japonica GN=IAA19 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.178e-43
Identity = 97/206 (47.09%), Postives = 127/206 (61.65%), Query Frame = 3
Query:  255 KRGFADTVVDLK-----LNLSTKESGGIDVIQKTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQ--GMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEK 851
            KRGF D++   +           E G  +  ++ KG   +A GA       AKAQVVGWPPVRS+RKN +A      +G+++          +VKVSMDGAPYLRKVDLK Y SY++LS AL KMFS F  G   S     +D + +    D L   +YV TYEDKD DWMLVGD+PWD+F  SC++LRIM+GS+A G+APR++E+
Sbjct:   77 KRGFVDSLDRSEGRRAAATAGDDERGVREEEEEEKGLGEAAAGAPRA----AKAQVVGWPPVRSYRKNTLAASATKTKGEDQGKSEV--GCCYVKVSMDGAPYLRKVDLKTYSSYEDLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKDQEYVLTYEDKDADWMLVGDLPWDLFTTSCRKLRIMRGSDAAGMAPRSLEQ 276          
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA5_ORYSJ (Auxin-responsive protein IAA5 OS=Oryza sativa subsp. japonica GN=IAA5 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 5.848e-43
Identity = 89/182 (48.90%), Postives = 117/182 (64.29%), Query Frame = 3
Query:  312 SGGIDVIQKTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCG--SQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEK 851
            SG +      + K+A A      + P AKAQVVGWPPVR++RKN +A      +G++K          +VKVSMDGAPYLRKVDLK+Y SY++LS AL KMFS F  G  G      +D +      D L   +YV TYEDKD DWMLVGD+PWD+F   C++L+IM+GS+A G+APR++E+
Sbjct:   92 SGSVAAAAACQDKAAPAA-----APPAAKAQVVGWPPVRNYRKNTLAASASKGKGEDKGTAEGGP--LYVKVSMDGAPYLRKVDLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLVGDLPWDLFTTICRKLKIMRGSDAAGIAPRSIEQ 266          
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA5_ORYSI (Auxin-responsive protein IAA5 OS=Oryza sativa subsp. indica GN=IAA5 PE=2 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.702e-42
Identity = 84/157 (53.50%), Postives = 108/157 (68.79%), Query Frame = 3
Query:  387 PPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCG--SQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEK 851
            P AKAQVVGWPPVR++RKN +A      +G++K          +VKVSMDGAPYLRKVDLK+Y SY++LS AL KMFS F  G  G      +D +      D L   +YV TYEDKD DWMLVGD+PWD+F   C++L+IM+GS+A G+APR++E+
Sbjct:  113 PAAKAQVVGWPPVRNYRKNTLAASASKGKGEDKGTAEGGP--LYVKVSMDGAPYLRKVDLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLVGDLPWDLFTTICRKLKIMRGSDAAGIAPRSIEQ 267          
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA1_ORYSJ (Auxin-responsive protein IAA1 OS=Oryza sativa subsp. japonica GN=IAA1 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.791e-42
Identity = 101/206 (49.03%), Postives = 124/206 (60.19%), Query Frame = 3
Query:  264 FADTVVDLKLNLSTKESGGIDVIQKTKGKSAS-ATGATDLSKPPA---------KAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDAL-GKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVE 848
            F DT + L+L  S   +   D  +K    S+S A  A D S P A         KA+VVGWPPVRSFRKN +A +                   FVKV++DGAPYLRKVDL+ Y  Y +L  AL  K FS FTI            +E KL+D +NG++YVPTYEDKDGDWMLVGDVPW MFV++C+RLR+MK SEA+ LAPRA +
Sbjct:   20 FEDTALTLRLPGSLAAAAAPDPDRKRSSPSSSDAADAADNSSPLAAAADAPPAPKARVVGWPPVRSFRKNALAAK-------------------FVKVAVDGAPYLRKVDLEAYSGYDQLLRALQDKFFSHFTIRKFAD-------DERKLVDAVNGTEYVPTYEDKDGDWMLVGDVPWKMFVETCQRLRLMKSSEAVNLAPRAAQ 199          
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA4_ARATH (Auxin-responsive protein IAA4 OS=Arabidopsis thaliana GN=IAA4 PE=2 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 4.951e-42
Identity = 106/240 (44.17%), Postives = 130/240 (54.17%), Query Frame = 3
Query:  111 KFESFIKMINFEATELRLGLPXXXXXXXXXXXXXXXXXXXXXXXXXXMKRGFADTVVDLKLNLSTKESGGIDVIQKTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL 830
            K + + +++N +ATELRLGLP                             G  +TV   K N          V+ +   K   +TG T+ + PP KAQ+VGWPPVRS+RKN +  +K   EG             +VKVSMDGAPYLRK+DL +YK Y EL  +L  MF  F++G         F  E        GSD+VPTYEDKDGDWMLVGDVPW+MFV SCKRLRIMKGSE  GL
Sbjct:    3 KVDVYDELVNLKATELRLGLP-----------------------------GTEETVSCGKSNKR--------VLPEATEKEIESTGKTETASPP-KAQIVGWPPVRSYRKNNVQTKKSESEGQGN----------YVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFK-FSVGEY-------FEREG-----YKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGL 181          
The following BLAST results are available for this feature:
BLAST of CV884609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
IAA13_ORYSJ2.531e-5452.76Auxin-responsive protein IAA13 OS=Oryza sativa sub... [more]
IAA13_ORYSI2.531e-5452.76Auxin-responsive protein IAA13 OS=Oryza sativa sub... [more]
IAA11_ORYSJ2.142e-5348.12Auxin-responsive protein IAA11 OS=Oryza sativa sub... [more]
IAA17_ORYSJ4.623e-4845.88Auxin-responsive protein IAA17 OS=Oryza sativa sub... [more]
IAA3_ORYSJ5.651e-4658.54Auxin-responsive protein IAA3 OS=Oryza sativa subs... [more]
IAA19_ORYSJ1.178e-4347.09Auxin-responsive protein IAA19 OS=Oryza sativa sub... [more]
IAA5_ORYSJ5.848e-4348.90Auxin-responsive protein IAA5 OS=Oryza sativa subs... [more]
IAA5_ORYSI1.702e-4253.50Auxin-responsive protein IAA5 OS=Oryza sativa subs... [more]
IAA1_ORYSJ3.791e-4249.03Auxin-responsive protein IAA1 OS=Oryza sativa subs... [more]
IAA4_ARATH4.951e-4244.17Auxin-responsive protein IAA4 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008E04_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T7_E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884609 ID=CV884609; Name=CV884609; organism=Citrus sinensis; type=EST; length=924bp
AAAGTCTACTCTCGATGCCCTCTCAAACACAAACAAACCAACCAAAAAAA
AAAAACAAGAGAGTGATAATTAATTAATTAAGAGAGGAGTTTAAGGAGTG
TTTAGTGTGTAAATTTGAAAGTTTCATTAAGATGATTAACTTCGAAGCGA
CGGAGCTTCGGCTAGGGTTACCGGGCGGTAACGGCGGAAGCAGTGAAGGT
GGTGGTGGTGGCGGCGGCGGTGAGAAAGCCAAGAACAATAACATTAATGG
CATGAAGAGAGGATTTGCAGACACCGTTGTTGATTTGAAGCTAAATCTTT
CAACAAAAGAGTCAGGTGGGATTGATGTAATTCAGAAGACGAAGGGCAAA
AGTGCTTCTGCTACTGGGGCTACAGACCTTTCAAAGCCTCCGGCCAAGGC
ACAAGTTGTGGGTTGGCCACCCGTTAGATCATTCAGAAAGAACATCATGG
CCGTCCAAAAGGACAATGAAGAAGGTGATAATAAGGCTAGCAGCAGCAGC
AGCAGCAATGTAGCTTTTGTTAAAGTGAGCATGGATGGTGCCCCATACTT
GCGCAAGGTTGATTTGAAGCTATACAAAAGCTACCAAGAACTCTCTGATG
CCCTTGGCAAAATGTTCAGCTCTTTCACCATTGGTAACTGTGGGTCACAA
GGGATGAAGGATTTTATGAATGAGAGCAAACTGATTGATCTTTTGAATGG
CTCAGATTATGTACCTACTTATGAAGACAAAGATGGAGATTGGATGCTTG
TTGGTGATGTACCATGGGATATGTTTGTTGATTCATGCAAACGCTTAAGA
ATAATGAAAGGATCCGAGGCCATTGGACTTGCACCAAGGGCAGTTGAGAA
GTGCAAGAACAGAAGCTGAAGATTTGATTATGATCAGCAACTTTTTGCCA
AAAGCAGCTTGTTAAAAAAGCTGA
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