CV884609
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA13_ORYSJ (Auxin-responsive protein IAA13 OS=Oryza sativa subsp. japonica GN=IAA13 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 2.531e-54 Identity = 134/254 (52.76%), Postives = 151/254 (59.45%), Query Frame = 3 Query: 150 TELRLGLPXXXXXXXXXXXXXXXXXXXXXXXXXXMKRGFADTVVDLKLNLSTK-----ESGGIDVIQKTKGKSASATGATDLSKPPA-KAQVVGWPPVRSFRKNIMAVQ----KDNEEGDNK-----AXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 866 TELRLGLP KRGF +T+ DLKL L T +G + K K + A D KPPA KAQ VGWPPVRSFR+NIM VQ K EE D + A + AFVKVSMDGAPYLRKVDLK+Y SY++LS AL KMF +FT + MNE +NGSD V TYEDKDGDWMLVGDVPW MFV+SCKRLRIMKGSEAIGLAPRA +K KN+S Sbjct: 10 TELRLGLPGGGGGAAEAAAKAA-------------KRGFEETI-DLKLKLPTAGMEEAAAGKAEAPAAEKAKRPAEAAAADAEKPPAPKAQAVGWPPVRSFRRNIMTVQSVKSKKEEEADKQQQQPAANASGSNSSAFVKVSMDGAPYLRKVDLKMYNSYKDLSLALQKMFGTFTATG-------NNMNE------VNGSDAVTTYEDKDGDWMLVGDVPWQMFVESCKRLRIMKGSEAIGLAPRAKDKYKNKS 236
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA13_ORYSI (Auxin-responsive protein IAA13 OS=Oryza sativa subsp. indica GN=IAA13 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 2.531e-54 Identity = 134/254 (52.76%), Postives = 151/254 (59.45%), Query Frame = 3 Query: 150 TELRLGLPXXXXXXXXXXXXXXXXXXXXXXXXXXMKRGFADTVVDLKLNLSTK-----ESGGIDVIQKTKGKSASATGATDLSKPPA-KAQVVGWPPVRSFRKNIMAVQ----KDNEEGDNK-----AXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 866 TELRLGLP KRGF +T+ DLKL L T +G + K K + A D KPPA KAQ VGWPPVRSFR+NIM VQ K EE D + A + AFVKVSMDGAPYLRKVDLK+Y SY++LS AL KMF +FT + MNE +NGSD V TYEDKDGDWMLVGDVPW MFV+SCKRLRIMKGSEAIGLAPRA +K KN+S Sbjct: 10 TELRLGLPGGGGGAAEAAAKAA-------------KRGFEETI-DLKLKLPTAGMEEAAAGKAEAPAAEKAKRPAEAAAADAEKPPAPKAQAVGWPPVRSFRRNIMTVQSVKSKKEEEADKQQQQPAANASGSNSSAFVKVSMDGAPYLRKVDLKMYNSYKDLSLALQKMFGTFTATG-------NNMNE------VNGSDAVTTYEDKDGDWMLVGDVPWQMFVESCKRLRIMKGSEAIGLAPRAKDKYKNKS 236
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA11_ORYSJ (Auxin-responsive protein IAA11 OS=Oryza sativa subsp. japonica GN=IAA11 PE=2 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 2.142e-53 Identity = 128/266 (48.12%), Postives = 152/266 (57.14%), Query Frame = 3 Query: 135 INFEATELRLGLPXXXXXXXXXXXXXXXXXXXXXXXXXXMKRGFADTVVDLKLNLSTKESGGID-----------------------VIQKTKGKSASATGATDLSKPPA-KAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKN 860 + F+ TELRLGLP KRGFA+T+ DLKL L + ++++ +S+ T D KP A KAQVVGWPPVRSFRKN++A + A VKVSMDGAPYLRK+D+ +YKSY ELS A MF+SFTIG CGS + +KL D L +YVPTYEDKDGDWMLVGDVPW+MFV+SCKRLRIMKGSEAIGLAPRAVEKCK+ Sbjct: 4 LGFDETELRLGLPGAGELAARSSG----------------KRGFAETI-DLKLKLQPAAPAAVSGEEGAQEDKEDADAAAAAADEKMSMKRSASQSSVVTAEPDPDKPRAPKAQVVGWPPVRSFRKNVLAEK--------------CKAAALVKVSMDGAPYLRKIDVAMYKSYPELSMAFQNMFTSFTIGKCGSH--QQLKESNKLRDDL---EYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAVEKCKS 233
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA17_ORYSJ (Auxin-responsive protein IAA17 OS=Oryza sativa subsp. japonica GN=IAA17 PE=2 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 4.623e-48 Identity = 117/255 (45.88%), Postives = 146/255 (57.25%), Query Frame = 3 Query: 138 NFEATELRLGLPXXXXXXXXXXXXXXXXXXXXXXXXXXMKRGFADTVVDLKLNLSTKESGGIDVIQKTKGKSASATGATDLSK------------PPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 866 + + TELRLGLP KRGF+D L + + + G KGK A+A + ++ P AKAQVVGWPP+RS+RKN MA + ++ A +VKVSMDGAPYLRKVDLK YK+Y++LS AL KMF FT G KD ++ES+ +YV TYEDKDGDWMLVGDVPW+MF +SC+RLRIMKGS+AIGLAPRAV+K KNR+ Sbjct: 27 DLKGTELRLGLPGSHSPDRSPPAATLDLLPAAKGA----KRGFSDEARPLPASAAAAAAAG-------KGKKAAAGEEDEDAEEEDKKVAAAPQAPAAKAQVVGWPPIRSYRKNTMATNQLKSSKED-AEAKQGQGFLYVKVSMDGAPYLRKVDLKTYKNYKDLSTALEKMFIGFTTG-------KDGLSESR-----KDGEYVLTYEDKDGDWMLVGDVPWEMFANSCRRLRIMKGSDAIGLAPRAVDKSKNRN 257
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA3_ORYSJ (Auxin-responsive protein IAA3 OS=Oryza sativa subsp. japonica GN=IAA3 PE=2 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 5.651e-46 Identity = 96/164 (58.54%), Postives = 116/164 (70.73%), Query Frame = 3 Query: 384 KPPAKAQVVGWPPVRSFRKNIMA---VQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 866 +P AKAQVVGWPP+RS+RKN MA ++ + E+ D K +VKVSMDGAPYLRKVDLK YK+Y+++S L KMF F+ G G++ KD +YV TYEDKDGDWMLVGDVPW+MF DSC+RLRIMKGS+AIGLAPRA EK KNR+ Sbjct: 117 QPAAKAQVVGWPPIRSYRKNTMATNQIKSNKEDVDAKQGQ----GFLYVKVSMDGAPYLRKVDLKTYKNYKDMSLGLEKMFIGFSTGKEGAENQKD-------------GEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSDAIGLAPRAGEKSKNRN 263
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA19_ORYSJ (Auxin-responsive protein IAA19 OS=Oryza sativa subsp. japonica GN=IAA19 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.178e-43 Identity = 97/206 (47.09%), Postives = 127/206 (61.65%), Query Frame = 3 Query: 255 KRGFADTVVDLK-----LNLSTKESGGIDVIQKTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQ--GMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEK 851 KRGF D++ + E G + ++ KG +A GA AKAQVVGWPPVRS+RKN +A +G+++ +VKVSMDGAPYLRKVDLK Y SY++LS AL KMFS F G S +D + + D L +YV TYEDKD DWMLVGD+PWD+F SC++LRIM+GS+A G+APR++E+ Sbjct: 77 KRGFVDSLDRSEGRRAAATAGDDERGVREEEEEEKGLGEAAAGAPRA----AKAQVVGWPPVRSYRKNTLAASATKTKGEDQGKSEV--GCCYVKVSMDGAPYLRKVDLKTYSSYEDLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKDQEYVLTYEDKDADWMLVGDLPWDLFTTSCRKLRIMRGSDAAGMAPRSLEQ 276
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA5_ORYSJ (Auxin-responsive protein IAA5 OS=Oryza sativa subsp. japonica GN=IAA5 PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 5.848e-43 Identity = 89/182 (48.90%), Postives = 117/182 (64.29%), Query Frame = 3 Query: 312 SGGIDVIQKTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCG--SQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEK 851 SG + + K+A A + P AKAQVVGWPPVR++RKN +A +G++K +VKVSMDGAPYLRKVDLK+Y SY++LS AL KMFS F G G +D + D L +YV TYEDKD DWMLVGD+PWD+F C++L+IM+GS+A G+APR++E+ Sbjct: 92 SGSVAAAAACQDKAAPAA-----APPAAKAQVVGWPPVRNYRKNTLAASASKGKGEDKGTAEGGP--LYVKVSMDGAPYLRKVDLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLVGDLPWDLFTTICRKLKIMRGSDAAGIAPRSIEQ 266
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA5_ORYSI (Auxin-responsive protein IAA5 OS=Oryza sativa subsp. indica GN=IAA5 PE=2 SV=2) HSP 1 Score: 173.326 bits (438), Expect = 1.702e-42 Identity = 84/157 (53.50%), Postives = 108/157 (68.79%), Query Frame = 3 Query: 387 PPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCG--SQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEK 851 P AKAQVVGWPPVR++RKN +A +G++K +VKVSMDGAPYLRKVDLK+Y SY++LS AL KMFS F G G +D + D L +YV TYEDKD DWMLVGD+PWD+F C++L+IM+GS+A G+APR++E+ Sbjct: 113 PAAKAQVVGWPPVRNYRKNTLAASASKGKGEDKGTAEGGP--LYVKVSMDGAPYLRKVDLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLVGDLPWDLFTTICRKLKIMRGSDAAGIAPRSIEQ 267
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA1_ORYSJ (Auxin-responsive protein IAA1 OS=Oryza sativa subsp. japonica GN=IAA1 PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 3.791e-42 Identity = 101/206 (49.03%), Postives = 124/206 (60.19%), Query Frame = 3 Query: 264 FADTVVDLKLNLSTKESGGIDVIQKTKGKSAS-ATGATDLSKPPA---------KAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDAL-GKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVE 848 F DT + L+L S + D +K S+S A A D S P A KA+VVGWPPVRSFRKN +A + FVKV++DGAPYLRKVDL+ Y Y +L AL K FS FTI +E KL+D +NG++YVPTYEDKDGDWMLVGDVPW MFV++C+RLR+MK SEA+ LAPRA + Sbjct: 20 FEDTALTLRLPGSLAAAAAPDPDRKRSSPSSSDAADAADNSSPLAAAADAPPAPKARVVGWPPVRSFRKNALAAK-------------------FVKVAVDGAPYLRKVDLEAYSGYDQLLRALQDKFFSHFTIRKFAD-------DERKLVDAVNGTEYVPTYEDKDGDWMLVGDVPWKMFVETCQRLRLMKSSEAVNLAPRAAQ 199
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA4_ARATH (Auxin-responsive protein IAA4 OS=Arabidopsis thaliana GN=IAA4 PE=2 SV=2) HSP 1 Score: 171.785 bits (434), Expect = 4.951e-42 Identity = 106/240 (44.17%), Postives = 130/240 (54.17%), Query Frame = 3 Query: 111 KFESFIKMINFEATELRLGLPXXXXXXXXXXXXXXXXXXXXXXXXXXMKRGFADTVVDLKLNLSTKESGGIDVIQKTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL 830 K + + +++N +ATELRLGLP G +TV K N V+ + K +TG T+ + PP KAQ+VGWPPVRS+RKN + +K EG +VKVSMDGAPYLRK+DL +YK Y EL +L MF F++G F E GSD+VPTYEDKDGDWMLVGDVPW+MFV SCKRLRIMKGSE GL Sbjct: 3 KVDVYDELVNLKATELRLGLP-----------------------------GTEETVSCGKSNKR--------VLPEATEKEIESTGKTETASPP-KAQIVGWPPVRSYRKNNVQTKKSESEGQGN----------YVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFK-FSVGEY-------FEREG-----YKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGL 181 The following BLAST results are available for this feature:
BLAST of CV884609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884609 ID=CV884609; Name=CV884609; organism=Citrus sinensis; type=EST; length=924bpback to top |