CV884609

Overview
NameCV884609
Unique NameCV884609
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA15_ORYSJ (Auxin-responsive protein IAA15 OS=Oryza sativa subsp. japonica GN=IAA15 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.951e-42
Identity = 100/209 (47.85%), Postives = 127/209 (60.77%), Query Frame = 3
Query:  264 FADTVVDLKLNLSTKESGGIDVIQKTKG------KSASAT--------GATDLSKPPA-KAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDAL-GKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRA 842
            F DT + L+L  S+  S        +        K ASAT        G+T    PP+ KA+VVGWPPVR+FRKN +A          K          FVKV++DGAPYLRKVDL+ Y+ Y +L  AL  K FS FTI   G++       E KL+D ++G++YVPTYEDKDGDWMLVGDVPW MFV++C+RLR+MK SEA+ LAPR+
Sbjct:   20 FEDTALTLRLPGSSSSSSSSSSSSSSSSPSEPDRKRASATDDDPDNRLGSTATESPPSPKARVVGWPPVRAFRKNALAALAAASSSKAK----------FVKVAVDGAPYLRKVDLEAYRGYDQLLAALQDKFFSHFTIRKLGNE-------EMKLVDAVSGNEYVPTYEDKDGDWMLVGDVPWKMFVETCQRLRLMKSSEAVNLAPRS 211          
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: AX22D_PHAAU (Auxin-induced protein 22D OS=Phaseolus aureus GN=AUX22D PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 9.337e-41
Identity = 111/239 (46.44%), Postives = 128/239 (53.56%), Query Frame = 3
Query:  120 SFIKMINFEATELRLGLPXXXXXXXXXXXXXXXXXXXXXXXXXXMKRGFADTVVDLKLNLSTKES--GGIDVIQKTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL 830
            S+ K +N +ATELRLGLP                           KR  A +        S +ES   G DV ++            D   PPAKAQVVGWPP+RS+RKN +  QK  EE +         N  +VKVSM GAPYLRK+DLK+YKSY EL  AL  MF             K    E    +  NGS+Y PTYEDKDGDWMLVGDVPW+MFV SCKRLRIMKGSEA GL
Sbjct:    7 SYEKELNLKATELRLGLPGSDEPE---------------------KRATARSNKRSSPEASDEESISNGSDVTKE------------DNVVPPAKAQVVGWPPIRSYRKNNVQ-QKKEEESEG--------NGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMF-------------KCIFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWNMFVSSCKRLRIMKGSEAKGL 190          
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA3_ARATH (Auxin-responsive protein IAA3 OS=Arabidopsis thaliana GN=IAA3 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.548e-40
Identity = 97/234 (41.45%), Postives = 124/234 (52.99%), Query Frame = 3
Query:  129 KMINFEATELRLGLPXXXXXXXXXXXXXXXXXXXXXXXXXXMKRGFADTVVDLKLNLSTKESGGIDVIQKTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL 830
            + +N + TELRLGLP                                D V + K  +S   +    V+     K   ++     + PP KAQ+VGWPPVRS+RKN +  +K+  E + +          +VKVSMDGAPYLRK+DL  YK Y EL  AL  MF  F++G    +            D   GSD+VPTYEDKDGDWML+GDVPW+MF+ +CKRLRIMKGSEA GL
Sbjct:    3 EFVNLKETELRLGLPG------------------------------TDNVCEAKERVSCCNNNNKRVLSTDTEKEIESSSRKTETSPPRKAQIVGWPPVRSYRKNNIQSKKNESEHEGQGI--------YVKVSMDGAPYLRKIDLSCYKGYSELLKALEVMFK-FSVGEYFER------------DGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSEAKGL 185          
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: AX22E_PHAAU (Auxin-induced protein 22E OS=Phaseolus aureus GN=AUX22E PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 3.003e-39
Identity = 106/240 (44.17%), Postives = 128/240 (53.33%), Query Frame = 3
Query:  120 SFIKMINFEATELRLGLPXXXXXXXXXXXXXXXXXXXXXXXXXXMKRGFADTVVDLKLNLST---KESGGIDVIQKTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL 830
            S+   +N  ATELRLGLP                           KR  + +VV      S+   +ES     I      S + +   + S  PAK QVVGWPP+RSFRKN +  QK  E+GD            ++KVSM GAPYLRK+DLK+YKSY EL  AL  +F   T G    +            +  NGS+Y PTYEDKDGDWMLVGDVPW+MFV SCKRLRI+KGSEA GL
Sbjct:    3 SYETELNLRATELRLGLPGSDEPQE--------------------KRPCSGSVVRSSNKRSSPELEESRCKSNINSDSSDSTTTSDHNEDSVQPAKVQVVGWPPIRSFRKNSLQ-QKKVEQGDGTGM--------YLKVSMAGAPYLRKIDLKVYKSYPELLKALQNLFKC-TFGEYSER------------EGYNGSEYAPTYEDKDGDWMLVGDVPWNMFVSSCKRLRIIKGSEAKGL 200          
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: AX22B_PHAAU (Auxin-induced protein 22B OS=Phaseolus aureus GN=AUX22B PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.152e-37
Identity = 88/152 (57.89%), Postives = 99/152 (65.13%), Query Frame = 3
Query:  378 LSKPPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGS-QGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL 830
            +S PP KA++VGWPP+RS+RKN  +VQ+   +G             FVKVSMDGAPYLRKVDLK+Y  Y EL  AL  MF    IG     +G K             GS+Y PTYEDKDGDWMLVGDVPWDMFV SCKRLRIMKGSEA GL
Sbjct:   69 VSAPPPKAKIVGWPPIRSYRKN--SVQEGEGDG------------IFVKVSMDGAPYLRKVDLKVYGGYPELLKALETMFK-LAIGEYSEREGYK-------------GSEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGSEARGL 192          
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA1_ARATH (Auxin-responsive protein IAA1 OS=Arabidopsis thaliana GN=IAA1 PE=1 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 3.672e-37
Identity = 86/163 (52.76%), Postives = 103/163 (63.19%), Query Frame = 3
Query:  336 KTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGS-QGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEA 821
            ++  K  +     + + PPAK Q+VGWPPVRS RKN           +NK       NV++VKVSMDGAPYLRK+DLK+YK+Y EL  AL  MF  FT+G     +G K             GS +VPTYEDKDGDWMLVGDVPWDMF  SC++LRIMKGSEA
Sbjct:   33 RSNNKRKNNDSTEESAPPPAKTQIVGWPPVRSNRKN----------NNNK-------NVSYVKVSMDGAPYLRKIDLKMYKNYPELLKALENMFK-FTVGEYSEREGYK-------------GSGFVPTYEDKDGDWMLVGDVPWDMFSSSCQKLRIMKGSEA 164          
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA4_PEA (Auxin-induced protein IAA4 OS=Pisum sativum GN=IAA4/5 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 8.179e-37
Identity = 103/233 (44.21%), Postives = 122/233 (52.36%), Query Frame = 3
Query:  135 INFEATELRLGLPXXXXXXXXXXXXXXXXXXXXXXXXXXMKRGFADTVVDLKLNLSTKESGGIDVIQKTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGS-QGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL 830
            + F+ATELRLGLP                           KR    T         ++ES  I  +   +    S++ A     PPAKA++VGWPP+RS+RKN +       E D            FVKVSMDGAPYLRK+DL++Y  Y EL  AL  MF   TIG     +G K             GS+Y PTYEDKDGDWMLVGDVPWDMFV SCKRLRIMKG+EA GL
Sbjct:    1 MEFKATELRLGLPGITEEEEKKIIHGSSVVKNNN------KRQLPQT---------SEESVSISKVTNDEHIVESSSAA-----PPAKAKIVGWPPIRSYRKNSL------HEAD--------VGGIFVKVSMDGAPYLRKIDLRVYGGYSELLKALETMFK-LTIGEYSEREGYK-------------GSEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGTEAKGL 185          
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA2_ARATH (Auxin-responsive protein IAA2 OS=Arabidopsis thaliana GN=IAA2 PE=2 SV=3)

HSP 1 Score: 154.066 bits (388), Expect = 1.068e-36
Identity = 85/175 (48.57%), Postives = 99/175 (56.57%), Query Frame = 3
Query:  306 KESGGIDVIQKTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL 830
            KE   +  ++    +    T   + S PP K Q+VGWPPVRS RKN                     +V++VKVSMDGAPYLRK+DLK YK+Y EL  AL  MF       C  +G K             GS +VPTYEDKDGDWMLVGDVPWDMF  SCKRLRIMKGS+A  L
Sbjct:   28 KEEQEVSCVKSNNKRLFEETRDEEESTPPTKTQIVGWPPVRSSRKN-------------------NNSVSYVKVSMDGAPYLRKIDLKTYKNYPELLKALENMFKVMIGEYCEREGYK-------------GSGFVPTYEDKDGDWMLVGDVPWDMFSSSCKRLRIMKGSDAPAL 170          
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA23_ORYSJ (Auxin-responsive protein IAA23 OS=Oryza sativa subsp. japonica GN=IAA23 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.395e-36
Identity = 87/192 (45.31%), Postives = 116/192 (60.42%), Query Frame = 3
Query:  264 FADTVVDLKLNLSTKESGGIDVIQKTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPR 839
            + DT + L L  S+  S      ++   K A+     D   P  KA+ VGWPPVR++R+N  A+++D+                 VKV++DGAPYLRKVDL  +  Y  L  AL  MF+S      G  G  +    +KL+DL+ G++YVPTYEDKDGDWMLVGDVPW MFV+SCKR+R+MK SEA+ L+PR
Sbjct:   18 YDDTALTLALPGSSSSSSSTADPER---KRAAHADHADAKPPSPKARAVGWPPVRAYRRN--ALREDSARAK------------LVKVAVDGAPYLRKVDLAAHAGYAPLLRALHGMFASCLAVRGGGGGDGE---GTKLVDLVTGAEYVPTYEDKDGDWMLVGDVPWKMFVESCKRIRLMKSSEAVNLSPR 189          
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA24_ORYSJ (Auxin-responsive protein IAA24 OS=Oryza sativa subsp. japonica GN=IAA24 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.486e-33
Identity = 84/184 (45.65%), Postives = 105/184 (57.07%), Query Frame = 3
Query:  288 KLNLSTKES-GGIDVIQKTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIM-----AVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEA 821
            K +L  K S    D +    G SA+     D +  PAKAQVVGWPPVR++R+N       A     + GD K          +VKVSMDGAPYLRKVDLK+ K Y+EL +AL  +F+      C S    D  ++ +         +   YEDKDGD MLVGDVPW+MF+ SCK+LRIMKGSEA
Sbjct:   49 KRSLGAKRSLESTDSMASGTGTSAAGDEHDDDTAAPAKAQVVGWPPVRAYRRNTFHQAAAAAAATKKGGDEKQKQQQQGGGLYVKVSMDGAPYLRKVDLKMCKGYRELREALDLLFTK-----CFSATASDGCSDGQ---------FAIAYEDKDGDLMLVGDVPWEMFISSCKKLRIMKGSEA 218          
The following BLAST results are available for this feature:
BLAST of CV884609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
IAA15_ORYSJ4.951e-4247.85Auxin-responsive protein IAA15 OS=Oryza sativa sub... [more]
AX22D_PHAAU9.337e-4146.44Auxin-induced protein 22D OS=Phaseolus aureus GN=A... [more]
IAA3_ARATH3.548e-4041.45Auxin-responsive protein IAA3 OS=Arabidopsis thali... [more]
AX22E_PHAAU3.003e-3944.17Auxin-induced protein 22E OS=Phaseolus aureus GN=A... [more]
AX22B_PHAAU2.152e-3757.89Auxin-induced protein 22B OS=Phaseolus aureus GN=A... [more]
IAA1_ARATH3.672e-3752.76Auxin-responsive protein IAA1 OS=Arabidopsis thali... [more]
IAA4_PEA8.179e-3744.21Auxin-induced protein IAA4 OS=Pisum sativum GN=IAA... [more]
IAA2_ARATH1.068e-3648.57Auxin-responsive protein IAA2 OS=Arabidopsis thali... [more]
IAA23_ORYSJ1.395e-3645.31Auxin-responsive protein IAA23 OS=Oryza sativa sub... [more]
IAA24_ORYSJ5.486e-3345.65Auxin-responsive protein IAA24 OS=Oryza sativa sub... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008E04_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T7_E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884609 ID=CV884609; Name=CV884609; organism=Citrus sinensis; type=EST; length=924bp
AAAGTCTACTCTCGATGCCCTCTCAAACACAAACAAACCAACCAAAAAAA
AAAAACAAGAGAGTGATAATTAATTAATTAAGAGAGGAGTTTAAGGAGTG
TTTAGTGTGTAAATTTGAAAGTTTCATTAAGATGATTAACTTCGAAGCGA
CGGAGCTTCGGCTAGGGTTACCGGGCGGTAACGGCGGAAGCAGTGAAGGT
GGTGGTGGTGGCGGCGGCGGTGAGAAAGCCAAGAACAATAACATTAATGG
CATGAAGAGAGGATTTGCAGACACCGTTGTTGATTTGAAGCTAAATCTTT
CAACAAAAGAGTCAGGTGGGATTGATGTAATTCAGAAGACGAAGGGCAAA
AGTGCTTCTGCTACTGGGGCTACAGACCTTTCAAAGCCTCCGGCCAAGGC
ACAAGTTGTGGGTTGGCCACCCGTTAGATCATTCAGAAAGAACATCATGG
CCGTCCAAAAGGACAATGAAGAAGGTGATAATAAGGCTAGCAGCAGCAGC
AGCAGCAATGTAGCTTTTGTTAAAGTGAGCATGGATGGTGCCCCATACTT
GCGCAAGGTTGATTTGAAGCTATACAAAAGCTACCAAGAACTCTCTGATG
CCCTTGGCAAAATGTTCAGCTCTTTCACCATTGGTAACTGTGGGTCACAA
GGGATGAAGGATTTTATGAATGAGAGCAAACTGATTGATCTTTTGAATGG
CTCAGATTATGTACCTACTTATGAAGACAAAGATGGAGATTGGATGCTTG
TTGGTGATGTACCATGGGATATGTTTGTTGATTCATGCAAACGCTTAAGA
ATAATGAAAGGATCCGAGGCCATTGGACTTGCACCAAGGGCAGTTGAGAA
GTGCAAGAACAGAAGCTGAAGATTTGATTATGATCAGCAACTTTTTGCCA
AAAGCAGCTTGTTAAAAAAGCTGA
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