CV884609

Overview
NameCV884609
Unique NameCV884609
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA31_ORYSJ (Auxin-responsive protein IAA31 OS=Oryza sativa subsp. japonica GN=IAA31 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 9.358e-33
Identity = 88/202 (43.56%), Postives = 112/202 (55.45%), Query Frame = 3
Query:  282 DLKLNL-STKESGGIDVIQKTKGKSASATGATDLSK----PPAKAQVVGWPPVRSFRKNIM--------------AVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL 830
            +L+L L  T+E           G   +  G  D +K      AKAQVVGWPPVRS+RK+ +              A   + ++ ++ A         FVKVSMDGAPYLRK+DLK+YK Y+EL +AL  MF  F+ G      +             N SD+  TYEDKDGD MLVGDVP++MF+ +CKRLRIMKGSEA GL
Sbjct:    8 ELRLGLPGTEEEAAPPPSTPRAGSKRALAGEPDQAKIKPAAAAKAQVVGWPPVRSYRKSCLQPTTTTTKSKPPPAAAAAETQQKEDVAGAGGL----FVKVSMDGAPYLRKIDLKVYKGYRELREALEAMFLCFSGGAAADAAV-------------NPSDFAVTYEDKDGDLMLVGDVPFEMFISTCKRLRIMKGSEARGL 192          
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: AUX22_SOYBN (Auxin-induced protein AUX22 OS=Glycine max GN=AUX22 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 2.085e-32
Identity = 88/209 (42.11%), Postives = 117/209 (55.98%), Query Frame = 3
Query:  255 KRGFADTVVDLKLNLSTKESGGIDVIQKTKGKSA------------SATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEA--IGLAPR 839
            K G    + +L+L L   E     V +K + K A            S++G  D      K+QVVGWPPV S+RK     +    EG +K          +VKVSMDGAP+LRK+DL L+K Y +L+ AL K+F        G  GM + +  +      + S++VP YEDKDGDWMLVGDVPW+MF++SCKRLRIMK S+A   GL P+
Sbjct:    3 KEGLGLEITELRLGLPDAEHQVSVVNKKNEKKRAFSEIDDGVGDENSSSGGGDRKMETNKSQVVGWPPVCSYRK-----KNSMNEGASKM---------YVKVSMDGAPFLRKIDLGLHKGYSDLALALDKLF--------GCYGMVEALKNA------DNSEHVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKKSDAKGFGLQPK 183          
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA14_ORYSJ (Auxin-responsive protein IAA14 OS=Oryza sativa subsp. japonica GN=IAA14 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.644e-32
Identity = 84/206 (40.78%), Postives = 107/206 (51.94%), Query Frame = 3
Query:  279 VDLKLNLSTKESGGIDVIQKTKGKSASAT--------------GATDL---SKPPAKAQVVGWPPVRSFRKNIM--------AVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEA 821
            +D +L L    SGG D +   K +SAS+T              GA D+   + P +K QVVGWPPV S+R++          A  K    G+            +VKVSMDGAPYLRKVDL++Y  Y+EL DAL  +F  F+     S                  + +   YEDKDGD ML GDVPWDMF+ SCK+LRIM+GSEA
Sbjct:    6 IDAELRLGLPGSGGGDGVAAKKRRSASSTVKSEASGTACCGGAGARDVEDGASPASKVQVVGWPPVGSYRRSTFQSSSSSTAAAAKGKGGGETDQGRKNKGGGLYVKVSMDGAPYLRKVDLRMYGGYRELRDALDALFGCFSADASAS-----------------AAHFAVAYEDKDGDLMLAGDVPWDMFISSCKKLRIMRGSEA 194          
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA6_PEA (Auxin-induced protein IAA6 OS=Pisum sativum GN=IAA6 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.707e-31
Identity = 84/195 (43.08%), Postives = 109/195 (55.90%), Query Frame = 3
Query:  255 KRGFADTVVDLKLNLST---KESGGIDVIQKTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCG-SQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIG 827
            + G    + +L+L LS    K++    +  +  G      G+ D      K QVVGWPPV S+RK      K+  EG             ++KVSMDGAPYLRK+DL L+K Y EL+ AL K+F       CG  + +KD  N           ++VP YEDKDGDWMLVGDVPW+MF++SCKRLRIMK S+A G
Sbjct:    3 REGLGLEITELRLGLSCGEPKKNEKKRMFSEIDGGVEENGGSGDRKSVDKKNQVVGWPPVCSYRK------KNMNEGSKM----------YMKVSMDGAPYLRKIDLCLHKGYLELALALEKLFDC-----CGIEEALKDAEN----------CEHVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSDAKG 166          
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA12_ORYSJ (Auxin-responsive protein IAA12 OS=Oryza sativa subsp. japonica GN=IAA12 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.144e-30
Identity = 83/183 (45.36%), Postives = 102/183 (55.74%), Query Frame = 3
Query:  369 ATDLSKPPAKAQVVGWPPVRSFRKNIMAVQ----------------KDNEEGDNKAXXXXXXNVA------FVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL-APRAVE 848
            A + + P AKAQVVGWPPVRS+RK+    Q                KD     N A      + A       VKVSMDGAPYLRK+DL++YK Y+EL +AL  MF  F                S   D  N S++  TY+DKDGD MLVGDVP+DMF  +CK+LRIMK SEA GL +PR ++
Sbjct:   59 AVEAAPPVAKAQVVGWPPVRSYRKSCFQQQSAAASKSKAAVSSCNNKDEPITKNAAPAPAASSAAAANGGSLVKVSMDGAPYLRKIDLRMYKGYRELREALEAMFVCF----------------SGAADGANPSEFAITYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSEATGLGSPRQMK 225          
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA10_ORYSJ (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica GN=IAA10 PE=2 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 4.347e-30
Identity = 82/191 (42.93%), Postives = 107/191 (56.02%), Query Frame = 3
Query:  333 QKTKGKSASATGATDLS-KPPAKAQVVGWPPVRSFRKNIMA---------------------VQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPR 839
            ++ +G +A+ +  T  S  P +   VVGWPP+R FR N +                      VQKD EEG+ K          +VKV+MDG    RKVDL  ++SY+ L+ AL  MF+  +IG C S       N  KL+D  N ++Y  TYED+DGDWMLVGDVPW+MFV S KRLRIM+ S+A GL  R
Sbjct:   87 KRAEGPTATTSPGTVASGHPHSSFGVVGWPPIRQFRMNSLFNQAKENTSETDTKKTATNESDVQKDKEEGEKKGRV-----AGWVKVNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNT----NSLKLLD--NSAEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANGLGQR 266          
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA10_ORYSI (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica GN=IAA10 PE=2 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 4.347e-30
Identity = 82/191 (42.93%), Postives = 107/191 (56.02%), Query Frame = 3
Query:  333 QKTKGKSASATGATDLS-KPPAKAQVVGWPPVRSFRKNIMA---------------------VQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPR 839
            ++ +G +A+ +  T  S  P +   VVGWPP+R FR N +                      VQKD EEG+ K          +VKV+MDG    RKVDL  ++SY+ L+ AL  MF+  +IG C S       N  KL+D  N ++Y  TYED+DGDWMLVGDVPW+MFV S KRLRIM+ S+A GL  R
Sbjct:   87 KRAEGPTATTSPGTVASGHPHSSFGVVGWPPIRQFRMNSLFNQAKENTSETDTKKTATNESDVQKDKEEGEKKGRV-----AGWVKVNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNT----NSLKLLD--NSAEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANGLGQR 266          
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA19_ARATH (Auxin-responsive protein IAA19 OS=Arabidopsis thaliana GN=IAA19 PE=1 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 9.684e-30
Identity = 92/242 (38.02%), Postives = 118/242 (48.76%), Query Frame = 3
Query:  135 INFEATELRLGLPXXXXXXXXXXXXXXXXXXXXXXXXXXMKRGFADTVVDLKLNLSTKESGGIDVIQKTKGKSASATGATDLS-KPPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEA--IGLAPRAVEK 851
            +  E TELRLGLP                           KR F +      +N++   S G +  Q   G  +S   A  ++  P AK+QVVGWPPV S+RK          +   K        + +VKVSMDG PYLRK+DL   + Y +L+ AL K+F    IG     G              +  +YV  YEDKDGDWML GDVPW MF++SCKRLRIMK S+A   GL PR V++
Sbjct:    6 LGLEITELRLGLPGRDVAEKMMK-----------------KRAFTE------MNMT---SSGSNSDQCESGVVSSGGDAEKVNDSPAAKSQVVGWPPVCSYRK----------KNSCKEASTTKVGLGYVKVSMDGVPYLRKMDLGSSQGYDDLAFALDKLFGFRGIGVALKDG--------------DNCEYVTIYEDKDGDWMLAGDVPWGMFLESCKRLRIMKRSDATGFGLQPRGVDE 197          
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: AX22C_PHAAU (Auxin-induced protein 22C OS=Phaseolus aureus GN=AUX22C PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.680e-29
Identity = 79/189 (41.80%), Postives = 104/189 (55.03%), Query Frame = 3
Query:  288 KLNLSTKESGGIDVIQKTKGKSASA---------TGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIG 827
            +L L    +GG +   K K K+            + + +  K   K QVVGWPPV S+RK        N   + K          +VKVSMDGAP+LRK+DL ++K Y +L+ AL K F  + I     + +KD  N          +++VP YEDKDGDWMLVGDVPW+MF +SCKRLRIMK S+A G
Sbjct:   12 ELRLGLPGAGGENNTDKDKNKNKKRVFSDIEGENSSSEEDGKKETKNQVVGWPPVCSYRKK-------NTVNEPKL---------YVKVSMDGAPFLRKIDLAMHKGYSDLAFALDKFFGCYGI----CEALKDAEN----------AEHVPIYEDKDGDWMLVGDVPWEMFRESCKRLRIMKRSDAKG 170          
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA12_ARATH (Auxin-responsive protein IAA12 OS=Arabidopsis thaliana GN=IAA12 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.277e-29
Identity = 89/227 (39.21%), Postives = 119/227 (52.42%), Query Frame = 3
Query:  267 ADTVVDLKLNLST-----KESGGI-------DVIQKTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIM-------AVQKDNEEGDNKAXXXXXXN------------VAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGS-DYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEK 851
            A++ ++L L LS      KE G I        V  K   +S+S  GA+    PP  +QVVGWPP+   R N +       A + +  +G+ K                    + FVKV+MDG    RKVD++ + SY+ L+  L +MF   T   C          + K + LL+GS D+V TYEDK+GDWMLVGDVPW MF++S KRLRIM  SEA GLAPR  E+
Sbjct:   16 AESELELGLGLSLGGGAWKERGRILTAKDFPSVGSKRSAESSSHQGAS----PPRSSQVVGWPPIGLHRMNSLVNNQAMKAARAEEGDGEKKVVKNDELKDVSMKVNPKVQGLGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTC--------REKVKPLRLLDGSSDFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGLAPRRQEQ 230          
The following BLAST results are available for this feature:
BLAST of CV884609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
IAA31_ORYSJ9.358e-3343.56Auxin-responsive protein IAA31 OS=Oryza sativa sub... [more]
AUX22_SOYBN2.085e-3242.11Auxin-induced protein AUX22 OS=Glycine max GN=AUX2... [more]
IAA14_ORYSJ4.644e-3240.78Auxin-responsive protein IAA14 OS=Oryza sativa sub... [more]
IAA6_PEA6.707e-3143.08Auxin-induced protein IAA6 OS=Pisum sativum GN=IAA... [more]
IAA12_ORYSJ1.144e-3045.36Auxin-responsive protein IAA12 OS=Oryza sativa sub... [more]
IAA10_ORYSJ4.347e-3042.93Auxin-responsive protein IAA10 OS=Oryza sativa sub... [more]
IAA10_ORYSI4.347e-3042.93Auxin-responsive protein IAA10 OS=Oryza sativa sub... [more]
IAA19_ARATH9.684e-3038.02Auxin-responsive protein IAA19 OS=Arabidopsis thal... [more]
AX22C_PHAAU3.680e-2941.80Auxin-induced protein 22C OS=Phaseolus aureus GN=A... [more]
IAA12_ARATH6.277e-2939.21Auxin-responsive protein IAA12 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008E04_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T7_E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884609 ID=CV884609; Name=CV884609; organism=Citrus sinensis; type=EST; length=924bp
AAAGTCTACTCTCGATGCCCTCTCAAACACAAACAAACCAACCAAAAAAA
AAAAACAAGAGAGTGATAATTAATTAATTAAGAGAGGAGTTTAAGGAGTG
TTTAGTGTGTAAATTTGAAAGTTTCATTAAGATGATTAACTTCGAAGCGA
CGGAGCTTCGGCTAGGGTTACCGGGCGGTAACGGCGGAAGCAGTGAAGGT
GGTGGTGGTGGCGGCGGCGGTGAGAAAGCCAAGAACAATAACATTAATGG
CATGAAGAGAGGATTTGCAGACACCGTTGTTGATTTGAAGCTAAATCTTT
CAACAAAAGAGTCAGGTGGGATTGATGTAATTCAGAAGACGAAGGGCAAA
AGTGCTTCTGCTACTGGGGCTACAGACCTTTCAAAGCCTCCGGCCAAGGC
ACAAGTTGTGGGTTGGCCACCCGTTAGATCATTCAGAAAGAACATCATGG
CCGTCCAAAAGGACAATGAAGAAGGTGATAATAAGGCTAGCAGCAGCAGC
AGCAGCAATGTAGCTTTTGTTAAAGTGAGCATGGATGGTGCCCCATACTT
GCGCAAGGTTGATTTGAAGCTATACAAAAGCTACCAAGAACTCTCTGATG
CCCTTGGCAAAATGTTCAGCTCTTTCACCATTGGTAACTGTGGGTCACAA
GGGATGAAGGATTTTATGAATGAGAGCAAACTGATTGATCTTTTGAATGG
CTCAGATTATGTACCTACTTATGAAGACAAAGATGGAGATTGGATGCTTG
TTGGTGATGTACCATGGGATATGTTTGTTGATTCATGCAAACGCTTAAGA
ATAATGAAAGGATCCGAGGCCATTGGACTTGCACCAAGGGCAGTTGAGAA
GTGCAAGAACAGAAGCTGAAGATTTGATTATGATCAGCAACTTTTTGCCA
AAAGCAGCTTGTTAAAAAAGCTGA
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