CV884609
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA26_ORYSJ (Auxin-responsive protein IAA26 OS=Oryza sativa subsp. japonica GN=IAA26 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.722e-23 Identity = 57/109 (52.29%), Postives = 67/109 (61.47%), Query Frame = 3 Query: 516 FVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRA 842 FVKVSMDG PYLRKVD+ Y Y EL +AL MF TIG L+D ++ YED DGDWMLVGDVPW+MFV SCKR+R+M+ EA GL+ A Sbjct: 47 FVKVSMDGTPYLRKVDVAAYGDYLELVEALNDMFYCSTIG---------------LMDGYGEWEHAVVYEDGDGDWMLVGDVPWEMFVSSCKRMRVMRACEARGLSSNA 140
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA6_ORYSJ (Auxin-responsive protein IAA6 OS=Oryza sativa subsp. japonica GN=IAA6 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.498e-22 Identity = 64/157 (40.76%), Postives = 86/157 (54.78%), Query Frame = 3 Query: 393 AKAQVVGWPPVRSFRKNIMAV-------QKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSF-------TIGNCGSQGMKDFMNESKLIDLLNGS-DYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSE 818 A A VVGWPP+RSFR+N+ + + N+ + K N VK++MDG P RK+DL Y SY LS A+ ++F F T QG D + LL+GS +Y YED +GD MLVGDVPW +FV + KRLR+++ SE Sbjct: 172 AAAPVVGWPPIRSFRRNLASSSSSKHSPEPQNDNANAKVTLTCKKN-PLVKINMDGIPIGRKIDLAAYNSYDGLSSAVKQLFHGFLQAQKDQTNAQIAQQGADDKI----FYQLLDGSGEYTLVYEDSEGDRMLVGDVPWKVFVSTAKRLRVLRSSE 323
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA16_ORYSJ (Auxin-responsive protein IAA16 OS=Oryza sativa subsp. japonica GN=IAA16 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.336e-22 Identity = 68/185 (36.76%), Postives = 94/185 (50.81%), Query Frame = 3 Query: 312 SGGIDVIQKTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDNEE---GDNKAXXXXXXNVA-FVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSF----------TIGNCGSQGMKDFMNESKLIDLLNGS--DYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSE 818 S G+ T A S+P A VVGWPPVRSFR+N+ + ++ G + A VA FVKV+MDG P RKVDL + Y ELS A+ ++F T + G E + LL+G +Y YED +GD MLVGDVPW+MF+ + +RLR+++ S+ Sbjct: 29 SSGLQGNTSTAADGAKGNDGFKASRPAAP--VVGWPPVRSFRRNLASSSSSSKPPRGGRDAAAAATGGKVARFVKVNMDGVPIGRKVDLAAHGGYGELSAAVDRLFRGLLAAQRDPTMATAAAAAAAGESCTGEEEAIAGLLDGGSGEYTLVYEDDEGDQMLVGDVPWNMFIAAARRLRVLRSSD 211
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA18_ARATH (Auxin-responsive protein IAA18 OS=Arabidopsis thaliana GN=IAA18 PE=2 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 4.357e-22 Identity = 70/178 (39.33%), Postives = 90/178 (50.56%), Query Frame = 3 Query: 351 SASATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDN-----------------KAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMN----ESKLIDLLNGS-DYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSE 818 S S+T T K A VVGWPPVRSFRKN+ + D+ K FVK++M G P RKVDL + SY++LS + K+F +DF + E + LL+G+ +Y TYED +GD MLVGDVPW MFV S KRLR++K SE Sbjct: 80 SPSSTKTTS-HKRTAPGPVVGWPPVRSFRKNLASGSSSKLGNDSTTSNGVTLKNQKCDAAAKTTEPKRQGGMFVKINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQ------RDFPSSIEDEKPITGLLDGNGEYTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSE 250
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA28_ARATH (Auxin-responsive protein IAA28 OS=Arabidopsis thaliana GN=IAA28 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.162e-21 Identity = 59/147 (40.14%), Postives = 83/147 (56.46%), Query Frame = 3 Query: 399 AQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPR 839 A VVGWPPVRS R+N+ A K+ + K +VK++M+G P RKV+L Y +YQ+LS A+ ++FS KD + ++ Y YED +GD +LVGDVPW+MFV + KRL ++K S A L+PR Sbjct: 47 APVVGWPPVRSSRRNLTAQLKE----EMKKKESDEEKELYVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSK-----------KDSWDLNR--------QYTLVYEDTEGDKVLVGDVPWEMFVSTVKRLHVLKTSHAFSLSPR 170
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA10_ARATH (Auxin-responsive protein IAA10 OS=Arabidopsis thaliana GN=IAA10 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.162e-21 Identity = 74/221 (33.48%), Postives = 100/221 (45.25%), Query Frame = 3 Query: 267 ADTVVDLKLNLS-------TKESGGIDVIQKTKGKSASATGATDLSKPPAKAQVVGWPPVRSFRKNIMA---------------VQKDNEEG-------DNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFT--IGNCGSQGMKDFMNE--SKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL 830 ++T +DL L LS + S + + G SA + + + VGWPP+R++R N + +QK+ + D+ VKV+MDG RKVDL SY L L MF + +QG K SKL+D S+Y+ TY+DKDGDWMLVGDVPW MF+ S RLRIMK S G+ Sbjct: 41 SETELDLALGLSIGRRKVRSSLSSSSSSLTRESGTKRSADSSPAAASNATRQVAVGWPPLRTYRINSLVNQAKSLATEGGLSSGIQKETTKSVVVAAKNDDACFIKSSRTSMLVKVTMDGVIIGRKVDLNALDSYAALEKTLDLMFFQIPSPVTRSNTQGYKTIKETCTSKLLD--GSSEYIITYQDKDGDWMLVGDVPWQMFLGSVTRLRIMKTSIGAGV 259
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA25_ORYSJ (Auxin-responsive protein IAA25 OS=Oryza sativa subsp. japonica GN=IAA25 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.402e-20 Identity = 61/156 (39.10%), Postives = 86/156 (55.13%), Query Frame = 3 Query: 381 SKPPAKAQVVGWPPVRSFRKNIMA------------VQKDNEEGDNK---AXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRI 803 ++ + AQ+VGWPPVR+FRKN+ V+ ++EG A + FVKV+++G RK+DLK ++SY LS AL MF F S G+ NE + ++ + YV YED +GD MLVGDVPW++F+ S KRL I Sbjct: 85 NRAASSAQLVGWPPVRAFRKNLSTPKPADADDLMNKVKLCSDEGHGSRCAAQERRSSSTMFVKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFL-----SDGIATRDNELQQMEEGSKKRYVLVYEDNEGDRMLVGDVPWELFIASVKRLYI 235
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA4_ORYSJ (Auxin-responsive protein IAA4 OS=Oryza sativa subsp. japonica GN=IAA4 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.923e-18 Identity = 69/189 (36.51%), Postives = 94/189 (49.74%), Query Frame = 3 Query: 270 DTVVDLKLNLSTKESGGIDVIQKTKGKSASATGATDLSKP--PAKAQV-VGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSS----FTIGNCGSQ--GMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMK 809 D DL+L LS S ++Q +A+A A D S P P +QV WPP++ F ++ A+QK + G A FVKV M+G P RK+DL L Y L L MF + + C Q G K + +V TYED+DGDWM+VGDVPW++F+ S K+LRI + Sbjct: 35 DLSTDLRLGLSLSTSSSSSLLQ-----AAAAAAAADDSIPSTPRNSQVHADWPPIKPFLRS--ALQKASAAGGGGARRR---RTLFVKVYMEGVPIGRKLDLLLLDGYDSLLIKLCHMFKTPITYADVMECHQQVPGQK--------------AAHVLTYEDQDGDWMMVGDVPWELFLSSVKKLRIAR 199
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA4_ORYSI (Auxin-responsive protein IAA4 OS=Oryza sativa subsp. indica GN=IAA4 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.923e-18 Identity = 69/189 (36.51%), Postives = 94/189 (49.74%), Query Frame = 3 Query: 270 DTVVDLKLNLSTKESGGIDVIQKTKGKSASATGATDLSKP--PAKAQV-VGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSS----FTIGNCGSQ--GMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMK 809 D DL+L LS S ++Q +A+A A D S P P +QV WPP++ F ++ A+QK + G A FVKV M+G P RK+DL L Y L L MF + + C Q G K + +V TYED+DGDWM+VGDVPW++F+ S K+LRI + Sbjct: 35 DLSTDLRLGLSLSTSSSSSLLQ-----AAAAAAAADDSIPSTPRNSQVHADWPPIKPFLRS--ALQKASAAGGGGARRR---RTLFVKVYMEGVPIGRKLDLLLLDGYDSLLIKLCHMFKTPITYADVMECHQQVPGQK--------------AAHVLTYEDQDGDWMMVGDVPWELFLSSVKKLRIAR 199
BLAST of CV884609 vs. ExPASy Swiss-Prot
Match: IAA31_ARATH (Auxin-responsive protein IAA31 OS=Arabidopsis thaliana GN=IAA31 PE=2 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 8.504e-18 Identity = 55/179 (30.73%), Postives = 94/179 (52.51%), Query Frame = 3 Query: 279 VDLKLNLSTKESGGIDVIQKTKGKSAS--ATGATDLSKPPAKAQVVGWPPVRSFRKNIMAVQKDNEEGDNKAXXXXXXNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMK 809 +++ + S+ S +D + + +S+ + T S P + WPP++S ++ + ++ GD+ + FVKV M+G P RK+DL ++ Y+ L + L MF + I CG++ K +V TYEDKDGDWM+VGD+PWDMF+++ +RL+I + Sbjct: 1 MEVSNSCSSFSSSSVDSTKPSPSESSVNLSLSLTFPSTSPQREARQDWPPIKSRLRDTLKGRRLLRRGDDTSL--------FVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSII--CGNRDRKH---------------HVLTYEDKDGDWMMVGDIPWDMFLETVRRLKITR 154 The following BLAST results are available for this feature:
BLAST of CV884609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884609 ID=CV884609; Name=CV884609; organism=Citrus sinensis; type=EST; length=924bpback to top |