CV884598

Overview
NameCV884598
Unique NameCV884598
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length768
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884598 vs. ExPASy Swiss-Prot
Match: SAP10_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 10 OS=Arabidopsis thaliana GN=SAP10 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.426e-19
Identity = 51/154 (33.12%), Postives = 76/154 (49.35%), Query Frame = 3
Query:  210 CINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDK 671
            C   CG +G+    N+CS CYK  +L+   A                                   EP+    Q  C    S +VE +P +   RC  CK++VG+ GFKCRCG+++C SHRY ++H+CPFDY+ + R A+    P+I+A+KL +
Sbjct:   10 CEGGCGLYGTRVNNNLCSLCYKKSVLQHSPAL--------------------------------RFEPETEQSQ-CCPPTNSPAVEEEPVK-KRRCGICKRKVGMLGFKCRCGHMFCGSHRYPEEHSCPFDYKQSGRLALATQLPLIRADKLQR 129          
BLAST of CV884598 vs. ExPASy Swiss-Prot
Match: SAP15_ORYSJ (Zinc finger AN1 domain-containing stress-associated protein 15 OS=Oryza sativa subsp. japonica GN=SAP15 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.682e-18
Identity = 38/62 (61.29%), Postives = 50/62 (80.65%), Query Frame = 3
Query:  489 SRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 674
            +RC+ C+KRVGLTGF+CRCG L+C  HR+S+ H C FDY+TA R+ I +ANPVI+A K+ KI
Sbjct:  113 NRCNVCRKRVGLTGFRCRCGELFCPRHRHSETHECSFDYKTAGREEIARANPVIRAAKIIKI 174          
BLAST of CV884598 vs. ExPASy Swiss-Prot
Match: SAP14_ORYSJ (Zinc finger AN1 domain-containing stress-associated protein 14 OS=Oryza sativa subsp. japonica GN=SAP14 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.429e-17
Identity = 37/75 (49.33%), Postives = 53/75 (70.67%), Query Frame = 3
Query:  441 ASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKL 665
            AS  S S     +   +RC++C+++VGLTGFKCRCG  +C  HRY+D+H C FDY+++ R+ I K NPV+ A+KL
Sbjct:  159 ASYSSSSPATGEQPEANRCATCRRKVGLTGFKCRCGGTFCGGHRYADEHGCGFDYKSSGRELIAKQNPVVVADKL 233          
BLAST of CV884598 vs. ExPASy Swiss-Prot
Match: ZFAN3_RAT (AN1-type zinc finger protein 3 OS=Rattus norvegicus GN=Zfand3 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.085e-13
Identity = 55/210 (26.19%), Postives = 83/210 (39.52%), Query Frame = 3
Query:  189 PPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGS----IVNETSSSNGSESVAAATVDVQASSVEPKIISVQP----------------------SCASELSESVEAKPKEGP--------------------SRCSSCKKRVGLTGFK---CRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDK 671
            PP  P      CGF+GS  TMN+CSKC+ D   KQ       S+  S       ET+S N + SV   T+     S+  ++    P                      SC ++     EA P + P                     RC  C+ ++ L   +   CRCG ++C+ HR  ++H+C FD+    R+       ++K  KLD+
Sbjct:   15 PPRCP------CGFWGSSKTMNLCSKCFADFQKKQPDDDSTPSTSNSQSDLFSEETTSDNNNTSVTTPTLSPSQQSLPTELNVTSPSEEECGPCTDTAHVSLITPTKRSCGADSQSESEASPVKRPRLVENPERPEESGRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGRE-----EAIMKMVKLDR 213          
BLAST of CV884598 vs. ExPASy Swiss-Prot
Match: ZFAN3_MOUSE (AN1-type zinc finger protein 3 OS=Mus musculus GN=Zfand3 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.056e-12
Identity = 55/210 (26.19%), Postives = 83/210 (39.52%), Query Frame = 3
Query:  189 PPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGS----IVNETSSSNGSESVAAATVDVQASSVEPKIISVQP----------------------SCASELSESVEAKPKEGP--------------------SRCSSCKKRVGLTGFK---CRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDK 671
            PP  P      CGF+GS  TMN+CSKC+ D   KQ       S+  S       ET+S N + SV   T+     S+  ++    P                      SC ++     EA P + P                     RC  C+ ++ L   +   CRCG ++C+ HR  ++H+C FD+    R+       ++K  KLD+
Sbjct:   15 PPRCP------CGFWGSSKTMNLCSKCFADFQKKQPDDDSTPSTSNSQSDLFSEETTSDNNNTSVTTPTLSPSQQSLPTELNVTSPSTEECGPCTDTAHVSLITPTKRSCGADSQSENEASPVKRPRLVENPERPEESGRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGRE-----EAIMKMVKLDR 213          
BLAST of CV884598 vs. ExPASy Swiss-Prot
Match: ANUB1_HUMAN (AN1-type zinc finger and ubiquitin domain-containing protein 1 OS=Homo sapiens GN=ANUBL1 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.056e-12
Identity = 31/67 (46.27%), Postives = 46/67 (68.66%), Query Frame = 3
Query:  477 KEGPSRCSSCKKRVGL-TGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 674
            K+  + C  C K+ GL + ++CRCGN +C SHRY++ H C +DY++A R  + +ANPV+ A KL KI
Sbjct:  661 KKTTNHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDYKSAGRRYLHEANPVVNAPKLPKI 727          
BLAST of CV884598 vs. ExPASy Swiss-Prot
Match: ZFAN3_HUMAN (AN1-type zinc finger protein 3 OS=Homo sapiens GN=ZFAND3 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.801e-12
Identity = 54/210 (25.71%), Postives = 83/210 (39.52%), Query Frame = 3
Query:  189 PPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGS----IVNETSSSNGSESVAAATVDVQASSVEPKIISVQP----------------------SCASELSESVEAKPKEGP--------------------SRCSSCKKRVGLTGFK---CRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDK 671
            PP  P      CGF+GS  TMN+CSKC+ D   KQ     A S+  S       ET+S N + S+   T+      +  ++    P                      SC ++     EA P + P                     RC  C+ ++ L   +   CRCG ++C+ HR  ++H+C FD+    R+       ++K  KLD+
Sbjct:   15 PPRCP------CGFWGSSKTMNLCSKCFADFQKKQPDDDSAPSTSNSQSDLFSEETTSDNNNTSITTPTLSPSQQPLPTELNVTSPSKEECGPCTDTAHVSLITPTKRSCGTDSQSENEASPVKRPRLLENTERSEETSRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGRE-----EAIMKMVKLDR 213          
BLAST of CV884598 vs. ExPASy Swiss-Prot
Match: ZFAN3_XENLA (AN1-type zinc finger protein 3 homolog OS=Xenopus laevis GN=zfand3 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.012e-12
Identity = 57/209 (27.27%), Postives = 85/209 (40.67%), Query Frame = 3
Query:  189 PPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGS----IVNETSSSNGSESVAAATVD-VQASSVEPKIIS--------------------VQPSCASELSESVEAKPKEGP--------------------SRCSSCKKRVGLTGFK---CRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDK 671
            PP  P      CGF+GS  TMN+CSKC+ D   KQ     A S+  S      +ET S NG+ S+   TV+  Q    E  + S                     + SC S+     +  P + P                     RC  C+ ++ L   +   CRCG ++C+ HR  ++H+C FD+    R+       ++K  KLD+
Sbjct:   15 PPRCP------CGFWGSSKTMNLCSKCFADFQKKQPDEDTAPSTSSSQSDLFPSETDSDNGNTSIPTPTVNPTQQLPTELNVDSPSKEDCGPCTDSAHVSLTTPSKRSCDSDSQSEDDTSPMKRPRLLDSGDRPDNSSRSKQKSRRRCFRCQIKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGRE-----EAIMKMVKLDR 212          
The following BLAST results are available for this feature:
BLAST of CV884598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
SAP10_ARATH4.426e-1933.12Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP15_ORYSJ1.682e-1861.29Zinc finger AN1 domain-containing stress-associate... [more]
SAP14_ORYSJ2.429e-1749.33Zinc finger AN1 domain-containing stress-associate... [more]
ZFAN3_RAT8.085e-1326.19AN1-type zinc finger protein 3 OS=Rattus norvegicu... [more]
ZFAN3_MOUSE1.056e-1226.19AN1-type zinc finger protein 3 OS=Mus musculus GN=... [more]
ANUB1_HUMAN1.056e-1246.27AN1-type zinc finger and ubiquitin domain-containi... [more]
ZFAN3_HUMAN1.801e-1225.71AN1-type zinc finger protein 3 OS=Homo sapiens GN=... [more]
ZFAN3_XENLA4.012e-1227.27AN1-type zinc finger protein 3 homolog OS=Xenopus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008D11_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T3_D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884598 ID=CV884598; Name=CV884598; organism=Citrus sinensis; type=EST; length=768bp
AACGAGGACGTCTCTCATCGGTTTTTGCCTGCTCTCTCCCCGATAGGCCG
ATCTGGTCCATTTAATTTTAGGGGCTCATTGGATGCTGGCTTGAGCTCGG
GGATCGGCTTAAGGGATTCATTGCTGTTTCTTCTGTTGCTCGCAGGGGTG
GTGAAAACATGGACCATGATGAGACTGGATGCCAAGCTCCTCCTGAGGGC
CCTATCTTGTGCATCAACAATTGTGGTTTCTTTGGAAGTGTGGCTACTAT
GAATATGTGTTCCAAATGCTACAAGGATATAATGCTGAAACAGGATCAAG
CTAAGCTTGCTGCTTCATCTATTGGAAGCATTGTGAATGAAACGTCAAGC
AGCAATGGAAGTGAATCTGTTGCTGCTGCCACTGTTGATGTGCAAGCTAG
TTCAGTGGAGCCAAAAATCATCTCTGTGCAGCCATCATGTGCTTCAGAAT
TGAGCGAGAGTGTGGAGGCAAAGCCGAAGGAGGGTCCCAGCCGGTGCAGC
AGTTGCAAGAAGCGTGTTGGTTTAACAGGATTCAAATGTCGCTGTGGTAA
CTTATACTGTGTGTCACATCGCTATTCGGACAAACATAACTGCCCCTTTG
ACTACCGCACTGCTGCTAGGGATGCTATAATTAAAGCAAACCCTGTGATC
AAGGCTGAGAAGCTAGATAAAATCTAGATTCAATGGGATGAGGTTTCAAT
AATCAAAGAATGATGATCTTGCTCATCTGTTAGAGGCTTCTTCTGAGAAG
GCCACGTATCTTATCAGG
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