CV884595

Overview
NameCV884595
Unique NameCV884595
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length771
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3937 contig Csv1_Contig3937:1421..2191. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAO1_PSEAE (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa GN=sfcA PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.234e-25
Identity = 59/135 (43.70%), Postives = 84/135 (62.22%), Query Frame = -1
Query:  361 KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIR 765
            +PT+LIG SG    F++EVI  + S  ++PL++ LSNPTS+ E T +E   W+ G+A+ A+GSPF P +   K     Q NNAYIFPG GLG++ + A RV + ML+AA+ ALA         +G + P   +IR
Sbjct:  381 RPTVLIGVSGQRGLFSEEVIRELHSHCKQPLVMPLSNPTSRVEATPQEILNWTDGQALVATGSPFQPVQVGDKRIPIAQCNNAYIFPGIGLGVIAARANRVTEGMLMAAANALANCSPIVTQGEGAVLPALGDIR 515          
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAO1_PSEAB (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=sfcA PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.234e-25
Identity = 59/135 (43.70%), Postives = 84/135 (62.22%), Query Frame = -1
Query:  361 KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIR 765
            +PT+LIG SG    F++EVI  + S  ++PL++ LSNPTS+ E T +E   W+ G+A+ A+GSPF P +   K     Q NNAYIFPG GLG++ + A RV + ML+AA+ ALA         +G + P   +IR
Sbjct:  381 RPTVLIGVSGQRGLFSEEVIRELHSHCKQPLVMPLSNPTSRVEATPQEILNWTDGQALVATGSPFQPVQVGDKRIPIAQCNNAYIFPGIGLGVIAARANRVTEGMLMAAANALANCSPIVTRGEGAVLPALGDIR 515          
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAO1_PSEA7 (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa (strain PA7) GN=sfcA PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.206e-24
Identity = 68/181 (37.57%), Postives = 97/181 (53.59%), Query Frame = -1
Query:  223 KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 765
            +PT+LIG SG    F++EVI  +     +PL++ LSNPTS+ E T +E   W+ G+A+ A+GSPF P +   +     Q NNAYIFPG GLG++ + A RV D ML+AA+ ALA         +G + P   +IR             A   G A +    + L +  E+  + P YR YR
Sbjct:  381 RPTVLIGVSGQRGLFSEEVIRELHRHCPQPLVMPLSNPTSRVEATPQEILNWTDGQALVATGSPFQPVQVGDRRMPIAQCNNAYIFPGIGLGVIAARATRVTDGMLMAAANALANCSPIVTRGEGAVLPALGDIREVSKRIAVAVAKQAQAEGKALQ-TSDEVLNEAIEANFWFPRYRAYR 560          
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAO1_IDILO (NAD-dependent malic enzyme OS=Idiomarina loihiensis GN=sfcA PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.206e-24
Identity = 65/181 (35.91%), Postives = 98/181 (54.14%), Query Frame = -1
Query:  223 KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 765
            +P ILIG SG    FT++VI  MA   E+P+I  LSNP+   E    +   WS+G+AI A+GSPF   EY+G+++   Q NN+YIFPG GLG++   + RV D+ML  AS+ LA      N +   + P F+++              A + G+A  +     L +  ++  + P YR Y+
Sbjct:  379 EPDILIGVSGQAGLFTEQVISTMAKNVERPIIFPLSNPSKHVEAHPADVLKWSEGKAIVATGSPFGEVEYDGRIYPIAQCNNSYIFPGIGLGVLSVKSERVSDEMLRVASKTLANASPSANGKGEALLPAFNDLTQLSKDIAFAVGKVAQQEGLALEID-DDTLRERIDNNFWKPEYRFYK 558          
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAO1_PSEA8 (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa (strain LESB58) GN=sfcA PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.057e-24
Identity = 59/135 (43.70%), Postives = 83/135 (61.48%), Query Frame = -1
Query:  361 KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIR 765
            +PT+LIG SG    F++EVI  + S  ++PL++ LSNPTS+ E T +E   W+ G+A+ A+GSPF P +   K     Q NNAYIFPG GLG++   A RV + ML+AA+ ALA         +G + P   +IR
Sbjct:  381 RPTVLIGVSGQRGLFSEEVIRELHSHCKQPLVMPLSNPTSRVEATPQEILNWTDGQALVATGSPFQPVQVGDKRIPIAQCNNAYIFPGIGLGVIAVRANRVTEGMLMAAANALANCSPIVTQGEGAVLPALGDIR 515          
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAO12_VIBVY (NAD-dependent malic enzyme 2 OS=Vibrio vulnificus (strain YJ016) GN=sfcA2 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.274e-23
Identity = 69/180 (38.33%), Postives = 96/180 (53.33%), Query Frame = -1
Query:  223 PTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 762
            P +LIG +GV   F +E+IEAMA   E+P+++ LSNPTS+ E   E+   W++G+AI A+GSPF      GK +   Q NN+YIFPG GLG++ + A RV ++ML  AS  LA      N    ++ PP S I+             A E G A+     + L +  E   Y   Y  YR
Sbjct:  378 PDVLIGVTGVPGLFNQEIIEAMAEDCERPVVMPLSNPTSRVEAKPEDILMWTQGQAIVATGSPFPDVVLAGKRYPIAQCNNSYIFPGVGLGVISANAHRVTNEMLQQASITLASLSPMLN-GGNMLLPPLSEIQNVSRKIALEVAKKAVEQGKASHRTEERLLERIDEEFWYAQ-YCEYR 555          
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MLES_LACLA (Malolactic enzyme OS=Lactococcus lactis subsp. lactis GN=mleS PE=3 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 5.067e-23
Identity = 57/132 (43.18%), Postives = 82/132 (62.12%), Query Frame = -1
Query:  373 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPF 768
            +KPTIL+G+S     FTKEV+EAM +  E+P+I  +SNPT + E TAE+   WS G+A  A+G P     Y G  +  GQANN+ I+PG GLG++ S A  + D+M+ AA+ +L+  V +       + PPF
Sbjct:  366 VKPTILVGTSTNPGAFTKEVVEAMCANTERPVIFPISNPTKKMETTAEQVIEWSDGKAFVATGVPSGTISYKGVDYQIGQANNSLIYPGLGLGMLASEAKLLTDEMIGAAAHSLSGLV-DPGKPGAPVLPPF 496          
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MLES_OENOE (Malolactic enzyme OS=Oenococcus oeni GN=mleA PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.248e-21
Identity = 48/135 (35.56%), Postives = 80/135 (59.26%), Query Frame = -1
Query:  364 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNI 768
            + PTIL+G+S    +FT+E+++ M+ + E+P+I  +SNPT  +E  AE+   WS G+A+  +G P D  EY G  +  GQANNA I+PG G G + + +  +  +M+ AA+ +L   + +       + PP S +
Sbjct:  367 VHPTILVGTSTHPNSFTEEIVKDMSGYTERPIIFPISNPTKLAEAKAEDVLKWSNGKALIGTGVPVDDIEYEGNAYQIGQANNALIYPGLGFGAIAAQSKLLTPEMISAAAHSLG-GIVDTTKVGAAVLPPVSKL 500          
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAOX_SCHPO (NAD-dependent malic enzyme OS=Schizosaccharomyces pombe GN=mae2 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.742e-21
Identity = 50/116 (43.10%), Postives = 72/116 (62.07%), Query Frame = -1
Query:  424 VIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALA 771
            ++KPTIL+G SG    FT++ I  M+   E+P+I  +SNPT+  E   ++   WS G+A+ A+GSP  P   NGK +V  Q NNA ++P  G+  V+S    + D ML AAS+ALA
Sbjct:  381 LVKPTILLGCSGQPGKFTEKAIREMSKHVERPIIFPISNPTTLMEAKPDQIDKWSDGKALIATGSPLPPLNRNGKKYVISQCNNALLYPALGVACVLSRCKLLSDGMLKAASDALA 496          
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAOM_YEAST (NAD-dependent malic enzyme, mitochondrial OS=Saccharomyces cerevisiae GN=MAE1 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.154e-17
Identity = 46/116 (39.66%), Postives = 65/116 (56.03%), Query Frame = -1
Query:  421 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAK 768
            +KPT L+G S     FT++V+E M   N +P+I  LSNPT   E    +   W+   A+ A+GSPF P +     +   + NN Y FPG GLG V+S A  + D M+ AA + LA+
Sbjct:  462 VKPTCLVGCSTQAGAFTQDVVEEMHKHNPRPIIFPLSNPTRLHEAVPADLMKWTNNNALVATGSPFPPVD----GYRISENNNCYSFPGIGLGAVLSRATTITDKMISAAVDQLAE 573          
The following BLAST results are available for this feature:
BLAST of CV884595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_PSEAE9.234e-2543.70NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]
MAO1_PSEAB9.234e-2543.70NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]
MAO1_PSEA71.206e-2437.57NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]
MAO1_IDILO1.206e-2435.91NAD-dependent malic enzyme OS=Idiomarina loihiensi... [more]
MAO1_PSEA82.057e-2443.70NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]
MAO12_VIBVY2.274e-2338.33NAD-dependent malic enzyme 2 OS=Vibrio vulnificus ... [more]
MLES_LACLA5.067e-2343.18Malolactic enzyme OS=Lactococcus lactis subsp. lac... [more]
MLES_OENOE1.248e-2135.56Malolactic enzyme OS=Oenococcus oeni GN=mleA PE=3 ... [more]
MAOX_SCHPO4.742e-2143.10NAD-dependent malic enzyme OS=Schizosaccharomyces ... [more]
MAOM_YEAST4.154e-1739.66NAD-dependent malic enzyme, mitochondrial OS=Sacch... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_008D09_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T7_D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884595 ID=CV884595; Name=CV884595; organism=Citrus sinensis; type=EST; length=771bp
TTTTTTTTTTTTTTTTTAGACCGCAGTAAAAATATCACGAGTATCATGAA
GAATATTCTTCAACCATGTAGGCAGTGGTCCAACACCTTCATTTGATAAG
TACACATATACAGCAATACTTACACAAGTACAAAAGCCACCATAACACAC
CAAAACAAGTTATTTGACATTATTTTTGCTTAAAGACACTCAGCGGAGAC
AGAAATTTTGGCCGAACATTTAACGATAGTTTCGGTAGACAGGGGTATAC
ATGCAACTTTCAGCGCACTTCACCAGATTCTGAGGTCGAGGGAGACGCGT
AGCCACGCCTAGTTCATATGCCTTAGCAGCAACATTAGCAGCTATATTGG
CTGAAATTTTTCTAATATTAGAAAATGGTGGGTAGATCAATCCCTTCTCA
AAGTTCTCTTCTGTCACTTGTTTTGCCAAGGCTTCCGAGGCTGCCAGAAG
CATGTCGTCATGTACCCGAATTGCTCCAGAGATGACCAAACCCAAACCAA
ATCCAGGGAAGATGTAAGCATTGTTGGCCTGGCCAGGAACAAAAACTTTT
CCATTGTATTCAAAAGGATCAAATGGACTTCCACTAGCGAAAATTGCACG
ACCCTTACTCCAAGTGTAAGCTTCTTCAGCTGTACATTCTGACTGTGAGG
TTGGGTTGGAGAGAGCCAGGATGAGAGGTTTCTCATTGAAGGAGGCCATG
GCCTCGATTACTTCTTTTGTAAAAGTTCTTCCAACTCCAGATGATCCAAT
CAAAATTGTTGGCTTGATTAC
back to top