CV884595

Overview
NameCV884595
Unique NameCV884595
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length771
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAO1_SHIF8 (NAD-dependent malic enzyme OS=Shigella flexneri serotype 5b (strain 8401) GN=sfcA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.377e-28
Identity = 68/182 (37.36%), Postives = 105/182 (57.69%), Query Frame = -1 
Query:  223 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 768
            +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+             A + GVA +    + L +  +   +   YR+YR
Sbjct:  381 VKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAO1_SHIBS (NAD-dependent malic enzyme OS=Shigella boydii serotype 4 (strain Sb227) GN=sfcA PE=3 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.377e-28
Identity = 68/182 (37.36%), Postives = 105/182 (57.69%), Query Frame = -1 
Query:  223 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 768
            +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+             A + GVA +    + L +  +   +   YR+YR
Sbjct:  381 VKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAO1_SHIB3 (NAD-dependent malic enzyme OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=sfcA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.377e-28
Identity = 68/182 (37.36%), Postives = 105/182 (57.69%), Query Frame = -1 
Query:  223 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 768
            +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+             A + GVA +    + L +  +   +   YR+YR
Sbjct:  381 VKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAO1_ESCF3 (NAD-dependent malic enzyme OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=sfcA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.377e-28
Identity = 68/182 (37.36%), Postives = 105/182 (57.69%), Query Frame = -1 
Query:  223 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 768
            +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+             A + GVA +    + L +  +   +   YR+YR
Sbjct:  381 VKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAO1_ECOSM (NAD-dependent malic enzyme OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.377e-28
Identity = 68/182 (37.36%), Postives = 105/182 (57.69%), Query Frame = -1 
Query:  223 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 768
            +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+             A + GVA +    + L +  +   +   YR+YR
Sbjct:  381 VKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAO1_ECOLU (NAD-dependent malic enzyme OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.377e-28
Identity = 68/182 (37.36%), Postives = 105/182 (57.69%), Query Frame = -1 
Query:  223 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 768
            +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+             A + GVA +    + L +  +   +   YR+YR
Sbjct:  381 VKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAO1_ECO8A (NAD-dependent malic enzyme OS=Escherichia coli O8 (strain IAI1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.377e-28
Identity = 68/182 (37.36%), Postives = 105/182 (57.69%), Query Frame = -1 
Query:  223 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 768
            +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+             A + GVA +    + L +  +   +   YR+YR
Sbjct:  381 VKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAO1_ECO81 (NAD-dependent malic enzyme OS=Escherichia coli O81 (strain ED1a) GN=sfcA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.377e-28
Identity = 68/182 (37.36%), Postives = 105/182 (57.69%), Query Frame = -1 
Query:  223 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 768
            +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+             A + GVA +    + L +  +   +   YR+YR
Sbjct:  381 VKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAO1_ECO5E (NAD-dependent malic enzyme OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.377e-28
Identity = 68/182 (37.36%), Postives = 105/182 (57.69%), Query Frame = -1 
Query:  223 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 768
            +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+             A + GVA +    + L +  +   +   YR+YR
Sbjct:  381 VKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAO1_ECO57 (NAD-dependent malic enzyme OS=Escherichia coli O157:H7 GN=sfcA PE=3 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.377e-28
Identity = 68/182 (37.36%), Postives = 105/182 (57.69%), Query Frame = -1 
Query:  223 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 768
            +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+             A + GVA +    + L +  +   +   YR+YR
Sbjct:  381 VKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
The following BLAST results are available for this feature:
BLAST of CV884595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_SHIF81.377e-2837.36NAD-dependent malic enzyme OS=Shigella flexneri se... [more]
MAO1_SHIBS1.377e-2837.36NAD-dependent malic enzyme OS=Shigella boydii sero... [more]
MAO1_SHIB31.377e-2837.36NAD-dependent malic enzyme OS=Shigella boydii sero... [more]
MAO1_ESCF31.377e-2837.36NAD-dependent malic enzyme OS=Escherichia ferguson... [more]
MAO1_ECOSM1.377e-2837.36NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOLU1.377e-2837.36NAD-dependent malic enzyme OS=Escherichia coli O17... [more]
MAO1_ECO8A1.377e-2837.36NAD-dependent malic enzyme OS=Escherichia coli O8 ... [more]
MAO1_ECO811.377e-2837.36NAD-dependent malic enzyme OS=Escherichia coli O81... [more]
MAO1_ECO5E1.377e-2837.36NAD-dependent malic enzyme OS=Escherichia coli O15... [more]
MAO1_ECO571.377e-2837.36NAD-dependent malic enzyme OS=Escherichia coli O15... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008D09_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T7_D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884595 ID=CV884595; Name=CV884595; organism=Citrus sinensis; type=EST; length=771bp
TTTTTTTTTTTTTTTTTAGACCGCAGTAAAAATATCACGAGTATCATGAA
GAATATTCTTCAACCATGTAGGCAGTGGTCCAACACCTTCATTTGATAAG
TACACATATACAGCAATACTTACACAAGTACAAAAGCCACCATAACACAC
CAAAACAAGTTATTTGACATTATTTTTGCTTAAAGACACTCAGCGGAGAC
AGAAATTTTGGCCGAACATTTAACGATAGTTTCGGTAGACAGGGGTATAC
ATGCAACTTTCAGCGCACTTCACCAGATTCTGAGGTCGAGGGAGACGCGT
AGCCACGCCTAGTTCATATGCCTTAGCAGCAACATTAGCAGCTATATTGG
CTGAAATTTTTCTAATATTAGAAAATGGTGGGTAGATCAATCCCTTCTCA
AAGTTCTCTTCTGTCACTTGTTTTGCCAAGGCTTCCGAGGCTGCCAGAAG
CATGTCGTCATGTACCCGAATTGCTCCAGAGATGACCAAACCCAAACCAA
ATCCAGGGAAGATGTAAGCATTGTTGGCCTGGCCAGGAACAAAAACTTTT
CCATTGTATTCAAAAGGATCAAATGGACTTCCACTAGCGAAAATTGCACG
ACCCTTACTCCAAGTGTAAGCTTCTTCAGCTGTACATTCTGACTGTGAGG
TTGGGTTGGAGAGAGCCAGGATGAGAGGTTTCTCATTGAAGGAGGCCATG
GCCTCGATTACTTCTTTTGTAAAAGTTCTTCCAACTCCAGATGATCCAAT
CAAAATTGTTGGCTTGATTAC
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