CV884595

Overview
NameCV884595
Unique NameCV884595
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length771
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3937 contig Csv1_Contig3937:1421..2191. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAO1_ECO27 (NAD-dependent malic enzyme OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.798e-28
Identity = 68/182 (37.36%), Postives = 105/182 (57.69%), Query Frame = -1
Query:  223 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 768
            +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+             A + GVA +    + L +  +   +   YR+YR
Sbjct:  381 VKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWHAEYRDYR 561          
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAO1_SHEFN (NAD-dependent malic enzyme OS=Shewanella frigidimarina (strain NCIMB 400) GN=sfcA PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.348e-28
Identity = 72/182 (39.56%), Postives = 107/182 (58.79%), Query Frame = -1
Query:  223 KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLV-KCAESCMYTPVYRNYR 765
            KPT+LIG SG    FT+E+I+AM S  ++P++  LSNPTS+ E T ++   W+ G+A+ A+GSPF+P   NG+ F   Q NN++IFPG GLG++  GA RV D+ML+A+S ALA+         G + P   +I+             A + G+A  LP    L+ +  E+  + P YR Y+
Sbjct:  379 KPTVLIGVSGSPGLFTEEIIKAMHSHCKRPIVFPLSNPTSRVEATPKDILNWTSGQALVATGSPFEPVIVNGETFEIAQCNNSFIFPGIGLGVLSCGARRVSDEMLMASSRALAECSPLGKDGVGSLLPRLEDIQTVSKYIAFAVAKAAIDQGLA--LPCTDELLQQSIEANFWEPEYRRYK 558          
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAO1_ECOLI (NAD-dependent malic enzyme OS=Escherichia coli (strain K12) GN=sfcA PE=3 SV=4)

HSP 1 Score: 125.946 bits (315), Expect = 2.348e-28
Identity = 67/182 (36.81%), Postives = 105/182 (57.69%), Query Frame = -1
Query:  223 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 768
            +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +G++ P   +I+             A + GVA +    + L +  +   +   YR+YR
Sbjct:  381 VKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGMVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561          
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAO1_ECOLC (NAD-dependent malic enzyme OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=sfcA PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.348e-28
Identity = 67/182 (36.81%), Postives = 105/182 (57.69%), Query Frame = -1
Query:  223 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 768
            +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +G++ P   +I+             A + GVA +    + L +  +   +   YR+YR
Sbjct:  381 VKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGMVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561          
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAO1_ECOL6 (NAD-dependent malic enzyme OS=Escherichia coli O6 GN=sfcA PE=3 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 2.348e-28
Identity = 68/182 (37.36%), Postives = 105/182 (57.69%), Query Frame = -1
Query:  223 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 768
            +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+             A + GVA +    + L +  +   +   YR+YR
Sbjct:  381 VKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASEMLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWHAEYRDYR 561          
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAO1_ECOHS (NAD-dependent malic enzyme OS=Escherichia coli O9:H4 (strain HS) GN=sfcA PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.348e-28
Identity = 67/182 (36.81%), Postives = 105/182 (57.69%), Query Frame = -1
Query:  223 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 768
            +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +G++ P   +I+             A + GVA +    + L +  +   +   YR+YR
Sbjct:  381 VKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGMVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561          
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAO1_ECODH (NAD-dependent malic enzyme OS=Escherichia coli (strain K12 / DH10B) GN=sfcA PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.348e-28
Identity = 67/182 (36.81%), Postives = 105/182 (57.69%), Query Frame = -1
Query:  223 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 768
            +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +G++ P   +I+             A + GVA +    + L +  +   +   YR+YR
Sbjct:  381 VKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGMVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561          
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAO1_ECOBW (NAD-dependent malic enzyme OS=Escherichia coli (strain K12 / BW2952) GN=sfcA PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.348e-28
Identity = 67/182 (36.81%), Postives = 105/182 (57.69%), Query Frame = -1
Query:  223 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 768
            +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +G++ P   +I+             A + GVA +    + L +  +   +   YR+YR
Sbjct:  381 VKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGMVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561          
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAO1_AERS4 (NAD-dependent malic enzyme OS=Aeromonas salmonicida (strain A449) GN=sfcA PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.348e-28
Identity = 72/181 (39.78%), Postives = 102/181 (56.35%), Query Frame = -1
Query:  223 KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 765
            +P ILIG SG    FT+EV++ M     +P+I  LSNPTS+ E T  +   W+ G+A+ A+GSPF P EY GK +V  Q NN++IFPG GLG++ SGA RV D ML++AS ALA+        +G + P  ++I              A   G A + P  + + +  E+  + P YR YR
Sbjct:  381 RPDILIGVSGQPGLFTEEVVKTMHKHCTRPIIFPLSNPTSRVEATPADLIRWTDGQALVATGSPFAPVEYKGKRYVIAQCNNSFIFPGIGLGVIASGATRVTDAMLMSASRALAECSPLVKGAEGSLLPDLADIHQVSRYIAKMVAKTAMLQGKAVQTP-DEVIDQAIEANFWRPEYRRYR 560          
BLAST of CV884595 vs. ExPASy Swiss-Prot
Match: MAO1_PSYCK (NAD-dependent malic enzyme OS=Psychrobacter cryohalolentis (strain K5) GN=sfcA PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.067e-28
Identity = 72/179 (40.22%), Postives = 102/179 (56.98%), Query Frame = -1
Query:  223 TILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 759
            T+L G SG    FT+EV+EA+ +  E P++L LSNPTS+ E T +E   WS+G+AI A+GSPF    + G+ +   Q NN+YIFPG GLG++ + A  + D+ML AAS+ALA    E     G I PP   IR             A E  +A  +   +NL +  ++  + P YR+YR
Sbjct:  379 TVLFGVSGQKGLFTQEVVEALCANTEHPIVLPLSNPTSRVEATPQEVTNWSRGKAIVATGSPFPNTTFEGQSYEVSQCNNSYIFPGIGLGVLAARATGISDNMLTAASQALADISVEYEKAPGAILPPIKFIREISEKIAYAVALQAIEDKLALPV-TAENLERRLKANFWLPKYRDYR 556          
The following BLAST results are available for this feature:
BLAST of CV884595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_ECO271.798e-2837.36NAD-dependent malic enzyme OS=Escherichia coli O12... [more]
MAO1_SHEFN2.348e-2839.56NAD-dependent malic enzyme OS=Shewanella frigidima... [more]
MAO1_ECOLI2.348e-2836.81NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOLC2.348e-2836.81NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOL62.348e-2837.36NAD-dependent malic enzyme OS=Escherichia coli O6 ... [more]
MAO1_ECOHS2.348e-2836.81NAD-dependent malic enzyme OS=Escherichia coli O9:... [more]
MAO1_ECODH2.348e-2836.81NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOBW2.348e-2836.81NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_AERS42.348e-2839.78NAD-dependent malic enzyme OS=Aeromonas salmonicid... [more]
MAO1_PSYCK3.067e-2840.22NAD-dependent malic enzyme OS=Psychrobacter cryoha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008D09_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T7_D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884595 ID=CV884595; Name=CV884595; organism=Citrus sinensis; type=EST; length=771bp
TTTTTTTTTTTTTTTTTAGACCGCAGTAAAAATATCACGAGTATCATGAA
GAATATTCTTCAACCATGTAGGCAGTGGTCCAACACCTTCATTTGATAAG
TACACATATACAGCAATACTTACACAAGTACAAAAGCCACCATAACACAC
CAAAACAAGTTATTTGACATTATTTTTGCTTAAAGACACTCAGCGGAGAC
AGAAATTTTGGCCGAACATTTAACGATAGTTTCGGTAGACAGGGGTATAC
ATGCAACTTTCAGCGCACTTCACCAGATTCTGAGGTCGAGGGAGACGCGT
AGCCACGCCTAGTTCATATGCCTTAGCAGCAACATTAGCAGCTATATTGG
CTGAAATTTTTCTAATATTAGAAAATGGTGGGTAGATCAATCCCTTCTCA
AAGTTCTCTTCTGTCACTTGTTTTGCCAAGGCTTCCGAGGCTGCCAGAAG
CATGTCGTCATGTACCCGAATTGCTCCAGAGATGACCAAACCCAAACCAA
ATCCAGGGAAGATGTAAGCATTGTTGGCCTGGCCAGGAACAAAAACTTTT
CCATTGTATTCAAAAGGATCAAATGGACTTCCACTAGCGAAAATTGCACG
ACCCTTACTCCAAGTGTAAGCTTCTTCAGCTGTACATTCTGACTGTGAGG
TTGGGTTGGAGAGAGCCAGGATGAGAGGTTTCTCATTGAAGGAGGCCATG
GCCTCGATTACTTCTTTTGTAAAAGTTCTTCCAACTCCAGATGATCCAAT
CAAAATTGTTGGCTTGATTAC
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