CV884594

Overview
NameCV884594
Unique NameCV884594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO1_SHELP (NAD-dependent malic enzyme OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=sfcA PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.437e-33
Identity = 67/160 (41.88%), Postives = 107/160 (66.88%), Query Frame = 2
Query:  188 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            +G  +L  P  NKG AFTE+ER    L GLLP  + + + Q  +  +  + +   L +++ +  +++ NE L+Y+LL +++ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N   + +++IVVTDGERILGLGD G  GMGIP+GK
Sbjct:   13 AGPAILEAPLINKGSAFTEEERIFFNLEGLLPHVIETIEEQASRAYDQYKNFGNDLDRHIYLRNIQDTNETLYYRLLQNHITEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGK 172          
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO1_SHEDO (NAD-dependent malic enzyme OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=sfcA PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.437e-33
Identity = 69/160 (43.12%), Postives = 104/160 (65.00%), Query Frame = 2
Query:  188 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            +G  +L  P  NKG AF+E+ER    L GLLP  + + + Q  +       +   L K++ +  +++ NE LFY+L+ +N+ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N     ++VIVVTDGERILGLGD G  GMGIP+GK
Sbjct:   13 AGPAILEAPLINKGSAFSEEERIFFNLEGLLPYVIETIEEQAARAYAQFSNFSNDLDKHIYLRNIQDTNETLFYRLVRNNITEMMPIIYTPTVGLACERFSKNYRRNRGLFISYSNKDRIDDILNNSTRHKVKVIVVTDGERILGLGDQGIGGMGIPIGK 172          
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO1_SHEPW (NAD-dependent malic enzyme OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=sfcA PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.877e-33
Identity = 66/160 (41.25%), Postives = 107/160 (66.88%), Query Frame = 2
Query:  188 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            +G  +L  P  NKG AFT++ER    L GLLP  + + + Q  +  +  + +   L K++ +  +++ NE L+Y+L+ +++ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N   + +++IVVTDGERILGLGD G  GMGIP+GK
Sbjct:   13 AGPAILEAPLINKGSAFTDEERIFFNLEGLLPHVIETIEEQASRAYDQYKNFTNDLDKHIYLRNIQDTNETLYYRLVQNHITEMMPIIYTPTVGMACERFSKDYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGK 172          
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO1_SHEFN (NAD-dependent malic enzyme OS=Shewanella frigidimarina (strain NCIMB 400) GN=sfcA PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.877e-33
Identity = 68/160 (42.50%), Postives = 104/160 (65.00%), Query Frame = 2
Query:  188 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            +G  +L  P  NKG AF+E+ER    L GL+P  + +   Q  +     + +   L K++ +  +++ NE LFY+L+ +N+ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N     ++VIVVTDGERILGLGD G  GMGIP+GK
Sbjct:   13 AGPAILESPLLNKGSAFSEEERIYFNLEGLIPWVIETIDEQAARAYAQFKNFTNDLDKHIYLRNIQDTNETLFYRLVRNNISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRHKVKVIVVTDGERILGLGDQGIGGMGIPIGK 172          
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO1_PSEU2 (NAD-dependent malic enzyme OS=Pseudomonas syringae pv. syringae (strain B728a) GN=sfcA PE=3 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 1.877e-33
Identity = 75/167 (44.91%), Postives = 112/167 (67.07%), Query Frame = 2
Query:  167 PWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            P  IS A G  LL  P  NKG AFT +ER    L GLLP  V + + Q  ++ +  +Q    L K++ +  +++ NE LF++LL  +++E+LP++YTPTVG+ACQ++  I+R  +GL+IS  E+ +I ++L++  +  I++IVVTD ERILGLGD G  GMGIP+GK
Sbjct:    7 PLYISYA-GPSLLEMPLLNKGSAFTPQERVEFNLIGLLPQNVETIEEQVTRVYSQYKQCASDLDKHIYLRSIQDNNETLFFRLLDSHLDEMLPIIYTPTVGQACQEFSKIYRTHRGLFISYPERDRIDDILRSATKDRIKIIVVTDSERILGLGDQGIGGMGIPIGK 172          
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO1_PSESM (NAD-dependent malic enzyme OS=Pseudomonas syringae pv. tomato GN=sfcA PE=3 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 1.877e-33
Identity = 75/167 (44.91%), Postives = 112/167 (67.07%), Query Frame = 2
Query:  167 PWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            P  IS A G  LL  P  NKG AFT +ER    L GLLP  V + + Q  ++ +  +Q    L K++ +  +++ NE LF++LL  +++E+LP++YTPTVG+ACQ++  I+R  +GL+IS  E+ +I ++L++  +  I++IVVTD ERILGLGD G  GMGIP+GK
Sbjct:    7 PLYISYA-GPSLLEMPLLNKGSAFTPQERIEFNLIGLLPQNVETIEEQVTRVYSQYKQCASDLDKHIYLRSIQDNNETLFFRLLDSHLDEMLPIIYTPTVGQACQEFSKIYRTHRGLFISYPERDRIDDILRSATKDRIKIIVVTDSERILGLGDQGIGGMGIPIGK 172          
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO1_PSE14 (NAD-dependent malic enzyme OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=sfcA PE=3 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 1.877e-33
Identity = 75/167 (44.91%), Postives = 112/167 (67.07%), Query Frame = 2
Query:  167 PWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            P  IS A G  LL  P  NKG AFT +ER    L GLLP  V + + Q  ++ +  +Q    L K++ +  +++ NE LF++LL  +++E+LP++YTPTVG+ACQ++  I+R  +GL+IS  E+ +I ++L++  +  I++IVVTD ERILGLGD G  GMGIP+GK
Sbjct:    7 PLYISYA-GPSLLEMPLLNKGSAFTPQERVEFNLIGLLPQNVETIEEQVTRVYSQYKQCASDLDKHIYLRSIQDNNETLFFRLLDSHLDEMLPIIYTPTVGQACQEFSKIYRTHRGLFISYPERDRIDDILRSATKDRIKIIVVTDSERILGLGDQGIGGMGIPIGK 172          
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO1_SHEWM (NAD-dependent malic enzyme OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=sfcA PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.131e-33
Identity = 65/160 (40.62%), Postives = 106/160 (66.25%), Query Frame = 2
Query:  188 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            +G  +L  P  NKG AFT++ER    L GLLP  + + + Q  +  +    +   L +++ +  +++ NE L+Y+L+ +++ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N   + +++IVVTDGERILGLGD G  GMGIP+GK
Sbjct:   13 AGPAILEAPLINKGSAFTDEERVFFNLEGLLPHVIETIEEQASRAYDQYTNFTNDLDRHIYLRNIQDTNETLYYRLVQNHITEMMPIIYTPTVGMACERFSKNYRRNRGLFISYPHKDRIEDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGK 172          
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO1_SHESH (NAD-dependent malic enzyme OS=Shewanella sediminis (strain HAW-EB3) GN=sfcA PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.131e-33
Identity = 66/160 (41.25%), Postives = 106/160 (66.25%), Query Frame = 2
Query:  188 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            +G  +L  P  NKG AFT++ER    L GLLP  + + + Q  +  +    +   L K++ +  +++ NE L+Y+L+ +++ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N   + +++IVVTDGERILGLGD G  GMGIP+GK
Sbjct:   13 AGPAILEAPLINKGSAFTDEERVFFNLEGLLPHVIETIEEQASRAYDQYTNFTNDLDKHIYLRNIQDTNETLYYRLVQNHITEMMPIIYTPTVGMACERFSKNYRRNRGLFISYPNKDRIDDLLNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGK 172          
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO1_PSEA7 (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa (strain PA7) GN=sfcA PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.075e-32
Identity = 65/160 (40.62%), Postives = 110/160 (68.75%), Query Frame = 2
Query:  188 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            +G  LL  P  NKG AF+ +ER    L+GLLP  + + + Q ++  +        L +++ +  +++ NE LF++LL +++EE+LP++YTPTVG+ACQ++  I+R  +GL+IS  ++ +I ++L++  + +++++VVTD ERILGLGD G  GMGIP+GK
Sbjct:   14 AGPSLLEMPLLNKGSAFSTQERIDFNLQGLLPHNIETIEEQTERAYSQYNLCNTDLDRHIFLRSIQDNNETLFFRLLEEHLEEMLPIIYTPTVGQACQEFSKIYRTHRGLFISYPDRERIDDILRSATKNNVKIVVVTDSERILGLGDQGIGGMGIPIGK 173          
The following BLAST results are available for this feature:
BLAST of CV884594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_SHELP1.437e-3341.88NAD-dependent malic enzyme OS=Shewanella loihica (... [more]
MAO1_SHEDO1.437e-3343.13NAD-dependent malic enzyme OS=Shewanella denitrifi... [more]
MAO1_SHEPW1.877e-3341.25NAD-dependent malic enzyme OS=Shewanella piezotole... [more]
MAO1_SHEFN1.877e-3342.50NAD-dependent malic enzyme OS=Shewanella frigidima... [more]
MAO1_PSEU21.877e-3344.91NAD-dependent malic enzyme OS=Pseudomonas syringae... [more]
MAO1_PSESM1.877e-3344.91NAD-dependent malic enzyme OS=Pseudomonas syringae... [more]
MAO1_PSE141.877e-3344.91NAD-dependent malic enzyme OS=Pseudomonas syringae... [more]
MAO1_SHEWM7.131e-3340.63NAD-dependent malic enzyme OS=Shewanella woodyi (s... [more]
MAO1_SHESH7.131e-3341.25NAD-dependent malic enzyme OS=Shewanella sediminis... [more]
MAO1_PSEA72.075e-3240.63NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008D09_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T3_D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884594 ID=CV884594; Name=CV884594; organism=Citrus sinensis; type=EST; length=668bp
GTTTTTGTGAAAAGCAGAAAAAGTAAAAAGAGTGAGAATGGAGAGCACCA
TGAAGGAGATGAGAGACGGAGCTTCGGTTCTCGACTTCGACTCGAAATCC
ACCGTCGAAGGCGGCGTTGAAGACGTCTACGGTGAGGATCGTGCCACCGA
GGACCAGCTCGTCACTCCCTGGACCATCTCTGTTGCCAGCGGGTACTGTT
TGTTGAGGGATCCACGCCATAACAAAGGGCTTGCTTTCACTGAGAAAGAG
AGGGATGCCCACTACTTGCGCGGCCTTTTGCCTCCAGCTGTTATAAGTCA
ACAACTTCAGGAGAAGAAATTGATGAACAGCATCAGACAATATGAAGTTC
CGCTGCAAAAATATGTGGCCATGATGGAACTTGAGGAGAGAAATGAAAGA
CTGTTCTATAAGCTACTGATTGATAATGTTGAGGAACTTCTCCCAGTCGT
TTACACTCCAACTGTTGGTGAAGCTTGCCAGAAATATGGAAGTATCTTCA
GGCGTCCTCAGGGTCTATACATAAGTCTGAAAGAGAAGGGAAAGATTCTT
GAGGTTTTGAAGAACTGGCCTGAAAGGAGTATTCAGGTTATTGTTGTCAC
AGATGGTGAGCGCATTTTGGGACTTGGGGATCTTGGCTGTCAGGGGATGG
GAATTCCTGTTGGGAAAT
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