CV884594

Overview
NameCV884594
Unique NameCV884594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAON_SOLTU (NAD-dependent malic enzyme 59 kDa isoform, mitochondrial OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.194e-41
Identity = 82/169 (48.52%), Postives = 110/169 (65.09%), Query Frame = 2
Query:  191 GYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYE----------VPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            G  +L DP  NK   F   ERD   LRGLLPP VIS + Q  + M S R  E          V L K+  +  L +RNE L+Y++LIDN+++  P++YTPTVG  CQ Y  +FRRP+G+Y S K+KG+++ ++ NWP   + +IV+TDG RILGLGDLG QG+GIP+GK
Sbjct:   32 GADILHDPWFNKDTGFPMTERDRLGLRGLLPPRVISFEQQYDRFMESFRSLEKNTEGQPDSVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIFNWPSTQVDMIVLTDGSRILGLGDLGVQGIGIPIGK 200          
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAOX_DICDI (NADP-dependent malic enzyme OS=Dictyostelium discoideum GN=malA PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.171e-41
Identity = 78/156 (50.00%), Postives = 109/156 (69.87%), Query Frame = 2
Query:  200 LLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            +LR+P  NKG  F  +ER+   L+GLLPP V S Q Q  + ++    +   L++Y+ +  L +RNE LFY LL +N+E ++P++YTPTVGEACQK+G+ FR  QG+Y + ++KG I  ++ NWP   + +IVV+DG RILGLGDLG  GMGIPVGK
Sbjct:    8 ILRNPSANKGTGFNNEEREKLGLKGLLPPKVESLQEQSDRALSQFTSFNTNLERYIFLNCLRDRNETLFYYLLSNNLELMMPIIYTPTVGEACQKFGNEFRFAQGMYFASQDKGNIRAMMDNWPAEGVDIIVVSDGSRILGLGDLGTNGMGIPVGK 163          
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAOM_SOLTU (NAD-dependent malic enzyme 62 kDa isoform, mitochondrial OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.115e-41
Identity = 80/166 (48.19%), Postives = 114/166 (68.67%), Query Frame = 2
Query:  200 LLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVP----------LQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            +L DP  NKG AF+  ERD  ++RGLLPP V+S + Q  + M  +++ EV           L K+  +  L +RNE L+YK+L++N+EE  P+VYTPTVG  CQKY  +FRRP+G+Y S +++G+++ ++ NWP   + +IVVTDG RILGLGDLG QG+GI +GK
Sbjct:   52 ILHDPWFNKGTAFSFTERDRLHIRGLLPPNVMSFEQQIARFMADLKRLEVQARDGPSDPYVLAKWRILNRLHDRNETLYYKVLMENIEEYAPIVYTPTVGLVCQKYSGLFRRPRGMYFSAEDRGEMMSMVYNWPADQVDMIVVTDGSRILGLGDLGIQGIGIAIGK 217          
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO1_IDILO (NAD-dependent malic enzyme OS=Idiomarina loihiensis GN=sfcA PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.704e-40
Identity = 78/160 (48.75%), Postives = 115/160 (71.88%), Query Frame = 2
Query:  188 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            SG  LL  P  NKG AF+++ER A  L GLLPP   S + Q ++     R +E P+ K++ +  +++ NE LFY+LL D++EE++P++YTPTVG+AC+K+  I+R  +GL+IS  E+ +I ++L+N  ++ ++VIVVTDGERILGLGD G  GMGIP+GK
Sbjct:   13 SGPNLLETPLLNKGSAFSKEERAAFNLTGLLPPRYESIEEQAERAYMQYRSFETPINKHIYLRAIQDNNETLFYRLLTDHLEEMMPIIYTPTVGDACEKFSDIYRSSRGLFISYSERDQIDDILRNATKQKVKVIVVTDGERILGLGDQGIGGMGIPIGK 172          
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAOH_NEOFR (Malic enzyme, hydrogenosomal OS=Neocallimastix frontalis PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.023e-40
Identity = 76/164 (46.34%), Postives = 111/164 (67.68%), Query Frame = 2
Query:  176 ISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            ++  +G  +L DP+ NKG AFT  E+D   +RGL+PP   S + Q K+   ++ +   PL+K++ +  L+ RNE L+YK++++N  EL P++YTP VGEACQK+  IF + +G+Y S  ++G++  V  NWP   + VIVVTDG RILGLGDLG  GM IP+GK
Sbjct:   42 VTKKTGLDILNDPKLNKGSAFTADEKDRLGIRGLVPPRPQSLEAQYKRCKTNLDKISDPLEKFIYLNHLQNRNETLYYKMILENFVELAPIIYTPVVGEACQKFHKIFTQTRGMYFSTADRGQMSAVAANWPYDDVDVIVVTDGSRILGLGDLGAGGMQIPIGK 205          
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO1_ACIAD (NAD-dependent malic enzyme OS=Acinetobacter sp. (strain ADP1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.142e-37
Identity = 71/160 (44.38%), Postives = 113/160 (70.62%), Query Frame = 2
Query:  188 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            +GY LL  P  NKG AFT++ER    L GL+P  + + + Q ++       +   + K++ +  +++ NE LFY+L+ D++EE++P++YTPTVGEACQ++  I+RR +G++IS  ++  I ++L+N  +R+++VIV+TDGERILGLGD G  GMGIP+GK
Sbjct:   17 AGYTLLELPLLNKGSAFTQEERSHFNLHGLIPHVIETIEEQSQRSYQQYGAFNDDINKHIYLRNIQDTNETLFYRLINDHLEEMMPIIYTPTVGEACQRFSDIYRRHRGIFISYPDREHIDDILQNVSKRNVKVIVITDGERILGLGDQGIGGMGIPIGK 176          
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAOM_AMAHP (NAD-dependent malic enzyme 65 kDa isoform, mitochondrial OS=Amaranthus hypochondriacus PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.654e-37
Identity = 74/166 (44.58%), Postives = 110/166 (66.27%), Query Frame = 2
Query:  200 LLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVP----------LQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            +L+DP  NKG AF+  ERD   LRGLLPP V++ + Q ++    +R  E+           L K+  +  L +RNE +F+K+LI+N+EE  P+V TPTVG  CQK+  ++RRP+G+Y S  ++G+++ ++ NWP   + +IVVTDG RILGLGDLG  G+G+ +GK
Sbjct:   49 ILQDPWFNKGTAFSMTERDRLDLRGLLPPNVMTTEQQIERFTADLRVLELTTKDGPSDTYDLAKWRILNRLHDRNETMFFKVLIENIEEYAPIVSTPTVGLVCQKFSGLYRRPRGMYFSSDDRGEMMSMVYNWPAEQVDMIVVTDGSRILGLGDLGVHGIGVAIGK 214          
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO1_PSYA2 (NAD-dependent malic enzyme OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=sfcA PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 6.233e-37
Identity = 72/160 (45.00%), Postives = 113/160 (70.62%), Query Frame = 2
Query:  188 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            SG  LL  P  NKG AF+ +ERD+  L GLLP  + + + Q  +  + +R +   + K++ +  +++ NE LF+ L+  ++EE++P++YTPTVG+AC+K+  I+RR +GL+IS  ++ KI ++L+N  ++ ++VIVVTDGERILGLGD G  GMGIP+GK
Sbjct:   12 SGPALLETPLLNKGSAFSSEERDSFNLTGLLPHNIETIEEQSLRAYHQLRSFTTDIDKHIYLRNIQDTNETLFHHLIEQHIEEVMPLIYTPTVGQACEKFSQIYRRKRGLFISYPDRHKIDDMLQNATKQKVKVIVVTDGERILGLGDQGIGGMGIPIGK 171          
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO1_PSYCK (NAD-dependent malic enzyme OS=Psychrobacter cryohalolentis (strain K5) GN=sfcA PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.389e-36
Identity = 72/160 (45.00%), Postives = 113/160 (70.62%), Query Frame = 2
Query:  188 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            +G  LL  P  NKG AF+ +ERD+  L GLLP  + + + Q  +    +R +   + K++ +  +++ NE LF+ L+  ++EE++P++YTPTVG+AC+K+  I+RR +GL+IS  E+ KI ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+GK
Sbjct:   12 AGPALLETPLLNKGSAFSSEERDSFNLTGLLPHNIETIEEQSSRAYLQLRSFTSDMDKHIYLRNIQDTNETLFHHLIEQHIEEVMPLIYTPTVGQACEKFSQIYRRKRGLFISYPERHKIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGK 171          
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO1_PECCP (NAD-dependent malic enzyme OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.813e-36
Identity = 74/160 (46.25%), Postives = 113/160 (70.62%), Query Frame = 2
Query:  188 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            +G  LL  P  NKG AFTE+ER    L GLLP AV + + Q ++     ++++  ++K+V +  +++ NE LFY+LL  ++ E++P++YTPTVGEAC+ +  I+RR +GL+IS   +  I ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+GK
Sbjct:   16 AGPILLEFPLLNKGSAFTEEERANFNLHGLLPEAVETIEEQAERAWRQYQEFKHDIEKHVYLRNIQDTNETLFYRLLDGHLSEMMPIIYTPTVGEACEHFSDIYRRARGLFISYPNRAHIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGK 175          
The following BLAST results are available for this feature:
BLAST of CV884594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAON_SOLTU3.194e-4148.52NAD-dependent malic enzyme 59 kDa isoform, mitocho... [more]
MAOX_DICDI4.171e-4150.00NADP-dependent malic enzyme OS=Dictyostelium disco... [more]
MAOM_SOLTU7.115e-4148.19NAD-dependent malic enzyme 62 kDa isoform, mitocho... [more]
MAO1_IDILO2.704e-4048.75NAD-dependent malic enzyme OS=Idiomarina loihiensi... [more]
MAOH_NEOFR6.023e-4046.34Malic enzyme, hydrogenosomal OS=Neocallimastix fro... [more]
MAO1_ACIAD2.142e-3744.38NAD-dependent malic enzyme OS=Acinetobacter sp. (s... [more]
MAOM_AMAHP3.654e-3744.58NAD-dependent malic enzyme 65 kDa isoform, mitocho... [more]
MAO1_PSYA26.233e-3745.00NAD-dependent malic enzyme OS=Psychrobacter arctic... [more]
MAO1_PSYCK1.389e-3645.00NAD-dependent malic enzyme OS=Psychrobacter cryoha... [more]
MAO1_PECCP1.813e-3646.25NAD-dependent malic enzyme OS=Pectobacterium carot... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_008D09_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T3_D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884594 ID=CV884594; Name=CV884594; organism=Citrus sinensis; type=EST; length=668bp
GTTTTTGTGAAAAGCAGAAAAAGTAAAAAGAGTGAGAATGGAGAGCACCA
TGAAGGAGATGAGAGACGGAGCTTCGGTTCTCGACTTCGACTCGAAATCC
ACCGTCGAAGGCGGCGTTGAAGACGTCTACGGTGAGGATCGTGCCACCGA
GGACCAGCTCGTCACTCCCTGGACCATCTCTGTTGCCAGCGGGTACTGTT
TGTTGAGGGATCCACGCCATAACAAAGGGCTTGCTTTCACTGAGAAAGAG
AGGGATGCCCACTACTTGCGCGGCCTTTTGCCTCCAGCTGTTATAAGTCA
ACAACTTCAGGAGAAGAAATTGATGAACAGCATCAGACAATATGAAGTTC
CGCTGCAAAAATATGTGGCCATGATGGAACTTGAGGAGAGAAATGAAAGA
CTGTTCTATAAGCTACTGATTGATAATGTTGAGGAACTTCTCCCAGTCGT
TTACACTCCAACTGTTGGTGAAGCTTGCCAGAAATATGGAAGTATCTTCA
GGCGTCCTCAGGGTCTATACATAAGTCTGAAAGAGAAGGGAAAGATTCTT
GAGGTTTTGAAGAACTGGCCTGAAAGGAGTATTCAGGTTATTGTTGTCAC
AGATGGTGAGCGCATTTTGGGACTTGGGGATCTTGGCTGTCAGGGGATGG
GAATTCCTGTTGGGAAAT
back to top