CV884594

Overview
NameCV884594
Unique NameCV884594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB2 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS223) GN=sfcA PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 7.619e-35
Identity = 69/160 (43.12%), Postives = 108/160 (67.50%), Query Frame = 2
Query:  188 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            +G  +L  P  NKG AF+E+ER    L GL+P A+ + + Q  +  +  R +   L K++ +  +++ NE LFY+L+ +N+ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N   + +++IVVTDGERILGLGD G  GMGIP+GK
Sbjct:   13 AGPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNNDLDKHIYLRNIQDTNETLFYRLVQNNISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGK 172          
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO1_PSYIN (NAD-dependent malic enzyme OS=Psychromonas ingrahamii (strain 37) GN=sfcA PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 7.619e-35
Identity = 69/160 (43.12%), Postives = 113/160 (70.62%), Query Frame = 2
Query:  188 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            +G  LL  P  NKG AF+++ER+   L GLLP  + + + Q  +    +  ++  L K++ +  +++ NE LF+ L+ +++EE++P++YTPTVG AC+++  I+RR +GL++S  E+ KI ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+GK
Sbjct:   12 AGPALLESPLLNKGSAFSQEERNNFNLTGLLPHNIETIESQSTRAYQQLSSFKSDLDKHIYLRNIQDTNETLFHHLIENHLEEVMPLIYTPTVGLACEQFSKIYRRKRGLFVSYPERHKIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGK 171          
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO1_VIBPA (NAD-dependent malic enzyme OS=Vibrio parahaemolyticus GN=sfcA PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 9.951e-35
Identity = 68/160 (42.50%), Postives = 108/160 (67.50%), Query Frame = 2
Query:  188 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            +G  L+  P  NKG AF+ +ER +  L GLLP    + Q Q ++     + +E  + K++ +  +++ NE LFY+L+ +++ E++P++YTPTVG AC+ + +I+RR +GL+IS   + +I ++L N    +++VIVVTDGERILGLGD G  GMGIP+GK
Sbjct:   13 AGPALMATPLLNKGSAFSAEERSSFNLEGLLPETTETIQEQVERAYQQYKSFESDMDKHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPTVGAACENFSNIYRRGRGLFISYPNRDRIDDLLNNAANHNVKVIVVTDGERILGLGDQGIGGMGIPIGK 172          
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO1_SALG2 (NAD-dependent malic enzyme OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=sfcA PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 9.951e-35
Identity = 71/160 (44.38%), Postives = 110/160 (68.75%), Query Frame = 2
Query:  188 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            +G  LL  P  NKG AF+ +ER    L GLLP  V S + Q ++     + ++  + K++ +  +++ NE LFY+L+ +++EE++PV+YTPTVG AC+++  I+RR +G++IS   +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GK
Sbjct:   16 AGPVLLEFPLLNKGSAFSAEERRNFNLSGLLPEVVESIEEQAERAWLQYQGFKTEIDKHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGK 175          
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO12_VIBVY (NAD-dependent malic enzyme 2 OS=Vibrio vulnificus (strain YJ016) GN=sfcA2 PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 9.951e-35
Identity = 68/160 (42.50%), Postives = 107/160 (66.88%), Query Frame = 2
Query:  188 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            +G  LL  P  NKG AFT +ER    L GLLP  + +   Q  +       +   ++K++ +  +++ NE L+++L+  ++EE++P++YTPTVGEACQK+  I+RR +GL++S +++ ++  +L N P   ++VIV+TDGERILGLGD G  GMGIP+GK
Sbjct:   10 AGNTLLNTPLLNKGSAFTLEERKNFNLIGLLPANIETIDEQVSRAYEQFSLFNSAMEKHIYLRNIQDTNETLYFRLINQHIEEMMPIIYTPTVGEACQKFSQIYRRNRGLFLSFEDQDELEAILNNAPNTHVKVIVITDGERILGLGDQGIGGMGIPIGK 169          
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO11_PHOPR (NAD-dependent malic enzyme 1 OS=Photobacterium profundum GN=sfcA1 PE=3 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 9.951e-35
Identity = 69/160 (43.12%), Postives = 111/160 (69.38%), Query Frame = 2
Query:  188 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            +G  LL  P  NKG AF+ +ER    L GLLP A+ S + Q ++     ++++  + K++ +  +++ NE LFY+L+ +++ E++P++YTPTVG AC+ + +I+RR +GL+IS   + +I ++L N   ++++VIVVTDGERILGLGD G  GMGIP+GK
Sbjct:   13 AGPALLETPLLNKGSAFSIEERMFFNLEGLLPEAIESIEEQTERAYQQYQKFDKDMDKHIYLRNIQDTNETLFYRLVENHITEMMPIIYTPTVGAACEDFSNIYRRGRGLFISYPNRDRIEDMLNNASRQNVKVIVVTDGERILGLGDQGIGGMGIPIGK 172          
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO1_SALTY (NAD-dependent malic enzyme OS=Salmonella typhimurium GN=sfcA PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.300e-34
Identity = 71/160 (44.38%), Postives = 110/160 (68.75%), Query Frame = 2
Query:  188 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            +G  LL  P  NKG AF+ +ER    L GLLP  V S + Q ++     + ++  + K++ +  +++ NE LFY+L+ +++EE++PV+YTPTVG AC+++  I+RR +G++IS   +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GK
Sbjct:   16 AGPVLLEFPLLNKGSAFSVEERRNFNLSGLLPEVVESIEEQAERAWLQYQGFKTEIDKHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGK 175          
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO1_SALTI (NAD-dependent malic enzyme OS=Salmonella typhi GN=sfcA PE=3 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 1.300e-34
Identity = 71/160 (44.38%), Postives = 110/160 (68.75%), Query Frame = 2
Query:  188 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            +G  LL  P  NKG AF+ +ER    L GLLP  V S + Q ++     + ++  + K++ +  +++ NE LFY+L+ +++EE++PV+YTPTVG AC+++  I+RR +G++IS   +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GK
Sbjct:   16 AGPVLLEFPLLNKGSAFSVEERRNFNLSGLLPEVVESIEEQAERAWLQYQGFKTEIDKHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGK 175          
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO1_SALSV (NAD-dependent malic enzyme OS=Salmonella schwarzengrund (strain CVM19633) GN=sfcA PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.300e-34
Identity = 71/160 (44.38%), Postives = 110/160 (68.75%), Query Frame = 2
Query:  188 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            +G  LL  P  NKG AF+ +ER    L GLLP  V S + Q ++     + ++  + K++ +  +++ NE LFY+L+ +++EE++PV+YTPTVG AC+++  I+RR +G++IS   +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GK
Sbjct:   16 AGPVLLEFPLLNKGSAFSVEERRNFNLSGLLPEVVESIEEQAERAWLQYQGFKTEIDKHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGK 175          
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO1_SALPB (NAD-dependent malic enzyme OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=sfcA PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.300e-34
Identity = 71/160 (44.38%), Postives = 110/160 (68.75%), Query Frame = 2
Query:  188 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            +G  LL  P  NKG AF+ +ER    L GLLP  V S + Q ++     + ++  + K++ +  +++ NE LFY+L+ +++EE++PV+YTPTVG AC+++  I+RR +G++IS   +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GK
Sbjct:   16 AGPVLLEFPLLNKGSAFSVEERRNFNLSGLLPEVVESIEEQAERAWLQYQGFKTEIDKHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGK 175          
The following BLAST results are available for this feature:
BLAST of CV884594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_SHEB27.619e-3543.13NAD-dependent malic enzyme OS=Shewanella baltica (... [more]
MAO1_PSYIN7.619e-3543.13NAD-dependent malic enzyme OS=Psychromonas ingraha... [more]
MAO1_VIBPA9.951e-3542.50NAD-dependent malic enzyme OS=Vibrio parahaemolyti... [more]
MAO1_SALG29.951e-3544.38NAD-dependent malic enzyme OS=Salmonella gallinaru... [more]
MAO12_VIBVY9.951e-3542.50NAD-dependent malic enzyme 2 OS=Vibrio vulnificus ... [more]
MAO11_PHOPR9.951e-3543.13NAD-dependent malic enzyme 1 OS=Photobacterium pro... [more]
MAO1_SALTY1.300e-3444.38NAD-dependent malic enzyme OS=Salmonella typhimuri... [more]
MAO1_SALTI1.300e-3444.38NAD-dependent malic enzyme OS=Salmonella typhi GN=... [more]
MAO1_SALSV1.300e-3444.38NAD-dependent malic enzyme OS=Salmonella schwarzen... [more]
MAO1_SALPB1.300e-3444.38NAD-dependent malic enzyme OS=Salmonella paratyphi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008D09_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T3_D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884594 ID=CV884594; Name=CV884594; organism=Citrus sinensis; type=EST; length=668bp
GTTTTTGTGAAAAGCAGAAAAAGTAAAAAGAGTGAGAATGGAGAGCACCA
TGAAGGAGATGAGAGACGGAGCTTCGGTTCTCGACTTCGACTCGAAATCC
ACCGTCGAAGGCGGCGTTGAAGACGTCTACGGTGAGGATCGTGCCACCGA
GGACCAGCTCGTCACTCCCTGGACCATCTCTGTTGCCAGCGGGTACTGTT
TGTTGAGGGATCCACGCCATAACAAAGGGCTTGCTTTCACTGAGAAAGAG
AGGGATGCCCACTACTTGCGCGGCCTTTTGCCTCCAGCTGTTATAAGTCA
ACAACTTCAGGAGAAGAAATTGATGAACAGCATCAGACAATATGAAGTTC
CGCTGCAAAAATATGTGGCCATGATGGAACTTGAGGAGAGAAATGAAAGA
CTGTTCTATAAGCTACTGATTGATAATGTTGAGGAACTTCTCCCAGTCGT
TTACACTCCAACTGTTGGTGAAGCTTGCCAGAAATATGGAAGTATCTTCA
GGCGTCCTCAGGGTCTATACATAAGTCTGAAAGAGAAGGGAAAGATTCTT
GAGGTTTTGAAGAACTGGCCTGAAAGGAGTATTCAGGTTATTGTTGTCAC
AGATGGTGAGCGCATTTTGGGACTTGGGGATCTTGGCTGTCAGGGGATGG
GAATTCCTGTTGGGAAAT
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