CV884594

Overview
NameCV884594
Unique NameCV884594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3937 contig Csv1_Contig3937:160..827. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO11_VIBVY (NAD-dependent malic enzyme 1 OS=Vibrio vulnificus (strain YJ016) GN=sfcA1 PE=3 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 2.895e-34
Identity = 68/160 (42.50%), Postives = 108/160 (67.50%), Query Frame = 2 
Query:  188 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            +G  LL  P  NKG AF+ +ER +  L GLLP    + Q Q ++     + +E  + K++ +  +++ NE LFY+L+ +++ E++P++YTPTVG AC+ + +I+RR +GL++S   + +I ++L N    +++VIVVTDGERILGLGD G  GMGIP+GK
Sbjct:   13 AGPALLSTPLLNKGSAFSAEERISFNLEGLLPETTETIQEQVERAYMQYKAFESDMDKHIYLRNIQDTNETLFYRLVQNHITEMMPIIYTPTVGAACENFSNIYRRGRGLFVSYANRDRIDDILNNASNHNVKVIVVTDGERILGLGDQGIGGMGIPIGK 172
[Close]
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO1_SHISS (NAD-dependent malic enzyme OS=Shigella sonnei (strain Ss046) GN=sfcA PE=3 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 4.938e-34
Identity = 69/160 (43.12%), Postives = 111/160 (69.38%), Query Frame = 2 
Query:  188 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            +G  LL  P  NKG AF+ +ER    L GLLP  V + + Q ++     + ++  + K++ +  +++ NE LFY+L+ ++++E++PV+YTPTVG AC+++  I+RR +G++IS + +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GK
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGK 175
[Close]
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO1_SHIFL (NAD-dependent malic enzyme OS=Shigella flexneri GN=sfcA PE=3 SV=4)

HSP 1 Score: 144.436 bits (363), Expect = 4.938e-34
Identity = 69/160 (43.12%), Postives = 111/160 (69.38%), Query Frame = 2 
Query:  188 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            +G  LL  P  NKG AF+ +ER    L GLLP  V + + Q ++     + ++  + K++ +  +++ NE LFY+L+ ++++E++PV+YTPTVG AC+++  I+RR +G++IS + +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GK
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGK 175
[Close]
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO1_SHIF8 (NAD-dependent malic enzyme OS=Shigella flexneri serotype 5b (strain 8401) GN=sfcA PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.938e-34
Identity = 69/160 (43.12%), Postives = 111/160 (69.38%), Query Frame = 2 
Query:  188 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            +G  LL  P  NKG AF+ +ER    L GLLP  V + + Q ++     + ++  + K++ +  +++ NE LFY+L+ ++++E++PV+YTPTVG AC+++  I+RR +G++IS + +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GK
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGK 175
[Close]
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO1_SHIBS (NAD-dependent malic enzyme OS=Shigella boydii serotype 4 (strain Sb227) GN=sfcA PE=3 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 4.938e-34
Identity = 69/160 (43.12%), Postives = 111/160 (69.38%), Query Frame = 2 
Query:  188 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            +G  LL  P  NKG AF+ +ER    L GLLP  V + + Q ++     + ++  + K++ +  +++ NE LFY+L+ ++++E++PV+YTPTVG AC+++  I+RR +G++IS + +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GK
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGK 175
[Close]
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO1_SHIB3 (NAD-dependent malic enzyme OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=sfcA PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.938e-34
Identity = 69/160 (43.12%), Postives = 111/160 (69.38%), Query Frame = 2 
Query:  188 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            +G  LL  P  NKG AF+ +ER    L GLLP  V + + Q ++     + ++  + K++ +  +++ NE LFY+L+ ++++E++PV+YTPTVG AC+++  I+RR +G++IS + +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GK
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGK 175
[Close]
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO1_ESCF3 (NAD-dependent malic enzyme OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=sfcA PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.938e-34
Identity = 69/160 (43.12%), Postives = 111/160 (69.38%), Query Frame = 2 
Query:  188 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            +G  LL  P  NKG AF+ +ER    L GLLP  V + + Q ++     + ++  + K++ +  +++ NE LFY+L+ ++++E++PV+YTPTVG AC+++  I+RR +G++IS + +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GK
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGK 175
[Close]
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO1_ENTS8 (NAD-dependent malic enzyme OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=sfcA PE=3 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 4.938e-34
Identity = 69/160 (43.12%), Postives = 108/160 (67.50%), Query Frame = 2 
Query:  188 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            +G  LL  P  NKG AF+ +ER    L GLLP  V + + Q ++       ++  + K++ +  +++ NE LFY+LL +++E ++P++YTPTVG AC+++  I+RR +G++IS   +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GK
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERSNFNLLGLLPEVVETIEEQAERAWRQFEDFKTDIDKHIYLRNIQDTNETLFYRLLENHLEVMMPIIYTPTVGSACERFSEIYRRARGVFISWPNRHNMDDILQNVPIHNIKVIVVTDGERILGLGDQGIGGMGIPIGK 175
[Close]
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO1_ECOUT (NAD-dependent malic enzyme OS=Escherichia coli (strain UTI89 / UPEC) GN=sfcA PE=3 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 4.938e-34
Identity = 69/160 (43.12%), Postives = 111/160 (69.38%), Query Frame = 2 
Query:  188 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            +G  LL  P  NKG AF+ +ER    L GLLP  V + + Q ++     + ++  + K++ +  +++ NE LFY+L+ ++++E++PV+YTPTVG AC+++  I+RR +G++IS + +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GK
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGK 175
[Close]
BLAST of CV884594 vs. ExPASy Swiss-Prot
Match: MAO1_ECOSM (NAD-dependent malic enzyme OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.938e-34
Identity = 69/160 (43.12%), Postives = 111/160 (69.38%), Query Frame = 2 
Query:  188 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGK 667
            +G  LL  P  NKG AF+ +ER    L GLLP  V + + Q ++     + ++  + K++ +  +++ NE LFY+L+ ++++E++PV+YTPTVG AC+++  I+RR +G++IS + +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GK
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGK 175
The following BLAST results are available for this feature:
BLAST of CV884594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO11_VIBVY2.895e-3442.50NAD-dependent malic enzyme 1 OS=Vibrio vulnificus ... [more]
MAO1_SHISS4.938e-3443.13NAD-dependent malic enzyme OS=Shigella sonnei (str... [more]
MAO1_SHIFL4.938e-3443.13NAD-dependent malic enzyme OS=Shigella flexneri GN... [more]
MAO1_SHIF84.938e-3443.13NAD-dependent malic enzyme OS=Shigella flexneri se... [more]
MAO1_SHIBS4.938e-3443.13NAD-dependent malic enzyme OS=Shigella boydii sero... [more]
MAO1_SHIB34.938e-3443.13NAD-dependent malic enzyme OS=Shigella boydii sero... [more]
MAO1_ESCF34.938e-3443.13NAD-dependent malic enzyme OS=Escherichia ferguson... [more]
MAO1_ENTS84.938e-3443.13NAD-dependent malic enzyme OS=Enterobacter sakazak... [more]
MAO1_ECOUT4.938e-3443.13NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOSM4.938e-3443.13NAD-dependent malic enzyme OS=Escherichia coli (st... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008D09_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T3_D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884594 ID=CV884594; Name=CV884594; organism=Citrus sinensis; type=EST; length=668bp
GTTTTTGTGAAAAGCAGAAAAAGTAAAAAGAGTGAGAATGGAGAGCACCA
TGAAGGAGATGAGAGACGGAGCTTCGGTTCTCGACTTCGACTCGAAATCC
ACCGTCGAAGGCGGCGTTGAAGACGTCTACGGTGAGGATCGTGCCACCGA
GGACCAGCTCGTCACTCCCTGGACCATCTCTGTTGCCAGCGGGTACTGTT
TGTTGAGGGATCCACGCCATAACAAAGGGCTTGCTTTCACTGAGAAAGAG
AGGGATGCCCACTACTTGCGCGGCCTTTTGCCTCCAGCTGTTATAAGTCA
ACAACTTCAGGAGAAGAAATTGATGAACAGCATCAGACAATATGAAGTTC
CGCTGCAAAAATATGTGGCCATGATGGAACTTGAGGAGAGAAATGAAAGA
CTGTTCTATAAGCTACTGATTGATAATGTTGAGGAACTTCTCCCAGTCGT
TTACACTCCAACTGTTGGTGAAGCTTGCCAGAAATATGGAAGTATCTTCA
GGCGTCCTCAGGGTCTATACATAAGTCTGAAAGAGAAGGGAAAGATTCTT
GAGGTTTTGAAGAACTGGCCTGAAAGGAGTATTCAGGTTATTGTTGTCAC
AGATGGTGAGCGCATTTTGGGACTTGGGGATCTTGGCTGTCAGGGGATGG
GAATTCCTGTTGGGAAAT
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