EY665296

Overview
NameEY665296
Unique NameEY665296
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: WAK5_ARATH (Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 7.722e-11
Identity = 32/95 (33.68%), Postives = 57/95 (60.00%), Query Frame = 3
Query:  135 FSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            F+   ++ AT+ ++   ++G GG G VYKG +  ++  VAIK+     +    +F  E+ +LSQ+ H ++V L+G C +    +LVY+F++ GTL
Sbjct:  396 FTEEGMKEATDGYNESRILGQGGQGTVYKGILQDNSI-VAIKKARLGDRSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFISSGTL 489          

HSP 2 Score: 26.1794 bits (56), Expect = 7.722e-11
Identity = 23/67 (34.33%), Postives = 29/67 (43.28%), Query Frame = 1
Query:  412 GLYVDHLYRSD-NPPLPWNQRLEICIGAPRGPPYLLLGQTRLYSFIGKWKTTNILLEKKGGAKVSQF 609
            G   DHL+ S  +  L W  RL I I       YL      +       KT NILL++   AKV+ F
Sbjct:  487 GTLFDHLHGSMFDSSLTWEHRLRIAIEVAGTLAYLH-SYASIPIIHRDVKTANILLDENLTAKVADF 552          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: Y5838_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.831e-11
Identity = 47/140 (33.57%), Postives = 74/140 (52.86%), Query Frame = 3
Query:    6 VRKVKDS--GSRTGTSLLGTFFSSKTIKATKSSRGSFLPSDLCTQFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            VRK +D   G+R   SL G     K +K        F+     ++  LS++  AT  F  D +I  G  G +YKG +   +  + IKRL+ +SQ+   EF  E+  L  +++ +LV L+GYC   +E +L+Y++MA G L
Sbjct:  257 VRKKQDDPEGNRWAKSLKG----QKGVKV-------FMFKKSVSKMKLSDLMKATEEFKKDNIIATGRTGTMYKGRLEDGSL-LMIKRLQ-DSQRSEKEFDAEMKTLGSVKNRNLVPLLGYCVANKERLLMYEYMANGYL 383          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: Y2242_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Arabidopsis thaliana GN=At2g24230 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.831e-11
Identity = 36/95 (37.89%), Postives = 56/95 (58.95%), Query Frame = 3
Query:  138 SLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTLR 422
            + S++ +AT+NFD D ++  G FG VY+GF+ G    VA+K L   S     E   E+  L +++H +LV L GYC  G + I +Y++M  G L+
Sbjct:  535 TFSDLLSATSNFDRDTLLADGKFGPVYRGFLPGGIH-VAVKVLVHGSTLSDQEAARELEFLGRIKHPNLVPLTGYCIAGDQRIAIYEYMENGNLQ 628          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 9.944e-11
Identity = 32/94 (34.04%), Postives = 50/94 (53.19%), Query Frame = 3
Query:  138 SLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            +  +I   T N D   +IG G    VYK   + ++ P+AIKR+  +      EF+TE+  +  +RH ++VSL GY       +L YD+M  G+L
Sbjct:  640 TFDDIMRVTENLDEKYIIGYGASSTVYK-CTSKTSRPIAIKRIYNQYPSNFREFETELETIGSIRHRNIVSLHGYALSPFGNLLFYDYMENGSL 732          

HSP 2 Score: 27.7202 bits (60), Expect = 9.944e-11
Identity = 20/54 (37.04%), Postives = 30/54 (55.56%), Query Frame = 1
Query:  454 LPWNQRLEICIGAPRGPPYLLLGQTR--LYSFIGKWKTTNILLEKKGGAKVSQF 609
            L W  RL+I +GA +G  YL    T   ++  I   K++NILL+    A++S F
Sbjct:  745 LDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDI---KSSNILLDGNFEARLSDF 795          
The following BLAST results are available for this feature:
BLAST of EY665296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 174
Match NameE-valueIdentityDescription
WAK5_ARATH7.722e-1133.68Wall-associated receptor kinase 5 OS=Arabidopsis t... [more]
Y5838_ARATH7.831e-1133.57Probably inactive leucine-rich repeat receptor-lik... [more]
Y2242_ARATH7.831e-1137.89Probable LRR receptor-like serine/threonine-protei... [more]
ERL2_ARATH9.944e-1134.04LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-C08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665296 ID=EY665296; Name=EY665296; organism=Citrus sinensis; type=EST; length=932bp
CACGCGTCCGGAAAGTCAAGGACTCGGGTTCCCGTACAGGTACTTCACTT
TTGGGGACTTTTTTTTCTTCTAAGACTATCAAGGCAACCAAGTCATCACG
CGGCTCATTCCTTCCTTCCGATCTTTGTACCCAATTTTCACTATCTGAAA
TCCAAGCGGCTACAAACAACTTCGACAATGATCTCGTAATTGGAGTTGGA
GGGTTTGGTAATGTCTACAAAGGCTTCATCAATGGCAGCACTACCCCTGT
TGCCATTAAACGACTGGAACCAGAGTCGCAACAGGGCGCCCTGGAATTCC
AAACTGAGATAGGAATGCTCTCGCAGCTCCGGCATCTTCACTTAGTCTCT
CTCATCGGCTATTGCAACGATGGCAGGGAGATGATCCTTGTATACGATTT
CATGGCTCGTGGGACTCTACGTGGATCATCTCTACCGTAGCGACAATCCT
CCTCTTCCATGGAATCAAAGGCTTGAAATCTGCATTGGTGCACCTCGTGG
GCCTCCCTATTTGCTACTGGGGCAAACCAGGCTGTATTCATTCATCGGGA
AGTGGAAAACAACCAACATCTTGTTGGAAAAAAAAGGGGGGGCCAAGGTT
TCCCAATTCGAACCCCCCCAATTTGGAACAACTTCCGGGCCCAAAACCTC
TGGGGAGTACGGTTGTAAAGGGGGAGGCGCGGAAAACTAAAAATCCGGAA
AAACAACCCGACTTCCCACAGTTTAATGGGAAAAACCTAGAACCCACACC
CCTTCCGGGGGGTTGGGGTGTGTCGAAAATTATTGGGGGGGCCCCGGCCC
CCCCATTTTCCCGGGGGAAAACACAAAAAAAAAAAAAAAAATAGGAAGGT
TAACAGTTTGTTGGGGGGGGGCACCCAATGGTATTATAATCAAGAGGGAG
AAAAATTTTTTGTAAAAGAAATGTGTTGTAAC
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