EY665296

Overview
NameEY665296
Unique NameEY665296
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 4.803e-24
Identity = 52/117 (44.44%), Postives = 70/117 (59.83%), Query Frame = 3
Query:   96 SRGSFLPSDLCTQFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFIN---------GSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            + G  L +     FSLSE+++AT NF  D V+G GGFG V+KG+I+         G+   +A+KRL  E  QG  E+  EI  L QL H +LV LIGYC +    +LVY+FM RG+L
Sbjct:   43 TEGEILQNANLKNFSLSELKSATRNFRPDSVVGEGGFGCVFKGWIDESSLAPSKPGTGIVIAVKRLNQEGFQGHREWLAEINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFMTRGSL 159          

HSP 2 Score: 39.6614 bits (91), Expect = 4.803e-24
Identity = 24/68 (35.29%), Postives = 36/68 (52.94%), Query Frame = 1
Query:  412 GLYVDHLYRSDN--PPLPWNQRLEICIGAPRGPPYLLLGQTRLYSFIGKWKTTNILLEKKGGAKVSQF 609
            G   +HL+R      PL WN R+ + +GA RG  +L   Q ++      +K +NILL+    AK+S F
Sbjct:  157 GSLENHLFRRGTFYQPLSWNTRVRMALGAARGLAFLHNAQPQV--IYRDFKASNILLDSNYNAKLSDF 222          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.292e-23
Identity = 51/120 (42.50%), Postives = 76/120 (63.33%), Query Frame = 3
Query:   60 FFSSKTIKATKSSRGSFLPSDLCTQFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            +   K +   +  RG  L +     F+L +I+ ATNNFD +  IG GGFG VYKG +    T +A+K+L  +S+QG  EF TEIGM+S L+H +LV L G C +G+E++LVY+++   +L
Sbjct:  635 YLGGKEVDENEELRGLDLQTG---SFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMT-IAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSL 750          

HSP 2 Score: 35.039 bits (79), Expect = 2.292e-23
Identity = 21/52 (40.38%), Postives = 29/52 (55.77%), Query Frame = 1
Query:  454 LPWNQRLEICIGAPRGPPYLLLGQTRLYSFIGKWKTTNILLEKKGGAKVSQF 609
            L W+ R +ICIG  +G  Y L  ++RL       K TN+LL+    AK+S F
Sbjct:  764 LDWSTRNKICIGIAKGLAY-LHEESRLKIVHRDIKATNVLLDLSLNAKISDF 814          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.983e-23
Identity = 51/120 (42.50%), Postives = 76/120 (63.33%), Query Frame = 3
Query:   60 FFSSKTIKATKSSRGSFLPSDLCTQFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            +   K +   +  RG  L +     F+L +I+ ATNNFD +  IG GGFG VYKG +    T +A+K+L  +S+QG  EF TEIGM+S L+H +LV L G C +G+E++LVY+++   +L
Sbjct:  633 YLGGKEVDENEELRGLDLQTG---SFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMT-IAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSL 748          

HSP 2 Score: 34.6538 bits (78), Expect = 2.983e-23
Identity = 20/52 (38.46%), Postives = 29/52 (55.77%), Query Frame = 1
Query:  454 LPWNQRLEICIGAPRGPPYLLLGQTRLYSFIGKWKTTNILLEKKGGAKVSQF 609
            L W+ R ++CIG  +G  Y L  ++RL       K TN+LL+    AK+S F
Sbjct:  762 LDWSTRNKVCIGIAKGLAY-LHEESRLKIVHRDIKATNVLLDLSLNAKISDF 812          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 3.190e-22
Identity = 51/125 (40.80%), Postives = 74/125 (59.20%), Query Frame = 3
Query:   48 LLGTFFSSKTIKATKSSRGSFLPSDLC-TQFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            + GT +    +++       F   +L    FSL +I+ ATNNFD+   IG GGFG VYKG +   T  +A+K+L   S+QG  EF  EIGM+S L H +LV L G C +G +++LVY+F+   +L
Sbjct:  582 VFGTLWKKGYLRSKSQMEKDFKSLELMIASFSLRQIKIATNNFDSANRIGEGGFGPVYKGKLFDGTI-IAVKQLSTGSKQGNREFLNEIGMISALHHPNLVKLYGCCVEGGQLLLVYEFVENNSL 705          

HSP 2 Score: 36.965 bits (84), Expect = 3.190e-22
Identity = 22/52 (42.31%), Postives = 29/52 (55.77%), Query Frame = 1
Query:  454 LPWNQRLEICIGAPRGPPYLLLGQTRLYSFIGKWKTTNILLEKKGGAKVSQF 609
            L W  R +ICIG  RG  Y L  ++RL       K TN+LL+K+   K+S F
Sbjct:  719 LDWPTRRKICIGVARGLAY-LHEESRLKIVHRDIKATNVLLDKQLNPKISDF 769          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 4.150e-22
Identity = 55/118 (46.61%), Postives = 78/118 (66.10%), Query Frame = 3
Query:   69 SKTIKATKSSRGSFLPSDLCTQFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTLR 422
            S   +  +SS+ S L  +    F+ +E+  AT+NF++   IG GG+G VYKG + GS T VAIKR +  S QG  EF TEI +LS+L H +LVSL+G+C++  E +LVY++M  GTLR
Sbjct:  592 SAVARRKRSSKAS-LKIEGVKSFTYAELALATDNFNSSTQIGQGGYGKVYKGTL-GSGTVVAIKRAQEGSLQGEKEFLTEIELLSRLHHRNLVSLLGFCDEEGEQMLVYEYMENGTLR 707          

HSP 2 Score: 28.1054 bits (61), Expect = 4.150e-22
Identity = 19/53 (35.85%), Postives = 28/53 (52.83%), Query Frame = 1
Query:  451 PLPWNQRLEICIGAPRGPPYLLLGQTRLYSFIGKWKTTNILLEKKGGAKVSQF 609
            PL +  RL I +G+ +G  YL   +     F    K +NILL+ +  AKV+ F
Sbjct:  717 PLDFAMRLRIALGSAKGILYLHT-EANPPIFHRDIKASNILLDSRFTAKVADF 768          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.617e-21
Identity = 45/96 (46.88%), Postives = 71/96 (73.96%), Query Frame = 3
Query:  138 SLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPE--SQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            S+  +++ TNNF +D ++G GGFG VYKG ++  T  +A+KR+E    + +G  EF++EI +L+++RH HLV+L+GYC DG E +LVY++M +GTL
Sbjct:  577 SIQVLRSVTNNFSSDNILGSGGFGVVYKGELHDGTK-IAVKRMENGVIAGKGFAEFKSEIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTL 671          

HSP 2 Score: 30.0314 bits (66), Expect = 2.617e-21
Identity = 21/55 (38.18%), Postives = 29/55 (52.73%), Query Frame = 1
Query:  451 PLPWNQRLEICIGAPRGPPYL--LLGQTRLYSFIGKWKTTNILLEKKGGAKVSQF 609
            PL W QRL + +   RG  YL  L  Q+ ++  +   K +NILL     AKV+ F
Sbjct:  685 PLLWKQRLTLALDVARGVEYLHGLAHQSFIHRDL---KPSNILLGDDMRAKVADF 736          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 4.432e-21
Identity = 47/112 (41.96%), Postives = 70/112 (62.50%), Query Frame = 3
Query:   87 TKSSRGSFLPSDLCTQFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTLR 422
            T+SS  S +  +   + +  E+   TNNF+   V+G GGFG VY G ++G+   VA+K L   S QG  EF+ E+ +L ++ H HLV L+GYC+DG  + L+Y++MA G LR
Sbjct:  560 TRSSNPSIITRE--RKITYPEVLKMTNNFER--VLGKGGFGTVYHGNLDGAE--VAVKMLSHSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMANGDLR 665          

HSP 2 Score: 33.8834 bits (76), Expect = 4.432e-21
Identity = 21/52 (40.38%), Postives = 29/52 (55.77%), Query Frame = 1
Query:  454 LPWNQRLEICIGAPRGPPYLLLGQTRLYSFIGKWKTTNILLEKKGGAKVSQF 609
            L W  R++I + A +G  YL  G  R        KTTNILL ++ GAK++ F
Sbjct:  677 LTWENRMQIAVEAAQGLEYLHNG-CRPPMVHRDVKTTNILLNERCGAKLADF 727          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.860e-20
Identity = 56/127 (44.09%), Postives = 77/127 (60.63%), Query Frame = 3
Query:   66 SSKTIKATKSSRGSFLPSDLCTQFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGST-TP--------VAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            SS T+ A + + G  L S     F+ +E++ AT NF  D VIG GGFG V+KG+++ ST TP        +A+K+L  E  QG  E+ TEI  L QL H +LV LIGYC +    +LVY+FM +G+L
Sbjct:   32 SSSTVAAAQKTEGEILSSTPVKSFTFNELKLATRNFRPDSVIGEGGFGCVFKGWLDESTLTPTKPGTGLVIAVKKLNQEGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEHRLLVYEFMQKGSL 158          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.631e-20
Identity = 42/97 (43.30%), Postives = 67/97 (69.07%), Query Frame = 3
Query:  132 QFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTLR 422
            +F+ SE++A T+NF+   V+G GGFG VY G +NG T P+A+K L   S QG  EF+ E+ +L ++ H++LVSL+GYC++   + L+Y++   G L+
Sbjct:  562 RFTYSEVEALTDNFER--VLGEGGFGVVYHGILNG-TQPIAVKLLSQSSVQGYKEFKAEVELLLRVHHVNLVSLVGYCDEESNLALLYEYAPNGDLK 655          

HSP 2 Score: 31.5722 bits (70), Expect = 3.631e-20
Identity = 20/53 (37.74%), Postives = 29/53 (54.72%), Query Frame = 1
Query:  451 PLPWNQRLEICIGAPRGPPYLLLGQTRLYSFIGKWKTTNILLEKKGGAKVSQF 609
            PL W+ RL+I +   +G  YL  G  +        KTTNILL++   AK++ F
Sbjct:  666 PLKWSSRLKIVVETAQGLEYLHTG-CKPPMVHRDVKTTNILLDEHFQAKLADF 717          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: PUB33_ARATH (U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 4.727e-20
Identity = 46/97 (47.42%), Postives = 68/97 (70.10%), Query Frame = 3
Query:  129 TQFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            T FS SEI+ ATN+FD+ L IG GG+G++Y G +    T VAIK L P S QG +E+Q E+ +LS++RH ++++LIG C +G    LVY+++  G+L
Sbjct:  467 TDFSFSEIEEATNHFDSTLKIGEGGYGSIYVGLLRH--TQVAIKMLNPNSSQGPVEYQQEVDVLSKMRHPNIITLIGACPEG--WSLVYEYLPGGSL 559          

HSP 2 Score: 28.4906 bits (62), Expect = 4.727e-20
Identity = 24/72 (33.33%), Postives = 32/72 (44.44%), Query Frame = 1
Query:  412 GLYVDHLYRSDN-PPLPWNQRL----EICIGAPRGPPYLLLGQTRLYSFI-GKWKTTNILLEKKGGAKVSQF 609
            G   D L   DN PPL W  R+    EIC         + L   + +S + G  K  NILL+    +K+S F
Sbjct:  557 GSLEDRLTCKDNSPPLSWQNRVRIATEICAA------LVFLHSNKAHSLVHGDLKPANILLDSNLVSKLSDF 622          
The following BLAST results are available for this feature:
BLAST of EY665296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 174
Match NameE-valueIdentityDescription
NAK_ARATH4.803e-2444.44Probable serine/threonine-protein kinase NAK OS=Ar... [more]
Y5343_ARATH2.292e-2342.50Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH2.983e-2342.50Probable LRR receptor-like serine/threonine-protei... [more]
Y1534_ARATH3.190e-2240.80Probable LRR receptor-like serine/threonine-protei... [more]
Y1684_ARATH4.150e-2246.61Probable LRR receptor-like serine/threonine-protei... [more]
TMK1_ARATH2.617e-2146.88Probable receptor protein kinase TMK1 OS=Arabidops... [more]
Y1518_ARATH4.432e-2141.96Probable LRR receptor-like serine/threonine-protei... [more]
BIK1_ARATH1.860e-2044.09Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
Y2289_ARATH3.631e-2043.30Probable LRR receptor-like serine/threonine-protei... [more]
PUB33_ARATH4.727e-2047.42U-box domain-containing protein 33 OS=Arabidopsis ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-C08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665296 ID=EY665296; Name=EY665296; organism=Citrus sinensis; type=EST; length=932bp
CACGCGTCCGGAAAGTCAAGGACTCGGGTTCCCGTACAGGTACTTCACTT
TTGGGGACTTTTTTTTCTTCTAAGACTATCAAGGCAACCAAGTCATCACG
CGGCTCATTCCTTCCTTCCGATCTTTGTACCCAATTTTCACTATCTGAAA
TCCAAGCGGCTACAAACAACTTCGACAATGATCTCGTAATTGGAGTTGGA
GGGTTTGGTAATGTCTACAAAGGCTTCATCAATGGCAGCACTACCCCTGT
TGCCATTAAACGACTGGAACCAGAGTCGCAACAGGGCGCCCTGGAATTCC
AAACTGAGATAGGAATGCTCTCGCAGCTCCGGCATCTTCACTTAGTCTCT
CTCATCGGCTATTGCAACGATGGCAGGGAGATGATCCTTGTATACGATTT
CATGGCTCGTGGGACTCTACGTGGATCATCTCTACCGTAGCGACAATCCT
CCTCTTCCATGGAATCAAAGGCTTGAAATCTGCATTGGTGCACCTCGTGG
GCCTCCCTATTTGCTACTGGGGCAAACCAGGCTGTATTCATTCATCGGGA
AGTGGAAAACAACCAACATCTTGTTGGAAAAAAAAGGGGGGGCCAAGGTT
TCCCAATTCGAACCCCCCCAATTTGGAACAACTTCCGGGCCCAAAACCTC
TGGGGAGTACGGTTGTAAAGGGGGAGGCGCGGAAAACTAAAAATCCGGAA
AAACAACCCGACTTCCCACAGTTTAATGGGAAAAACCTAGAACCCACACC
CCTTCCGGGGGGTTGGGGTGTGTCGAAAATTATTGGGGGGGCCCCGGCCC
CCCCATTTTCCCGGGGGAAAACACAAAAAAAAAAAAAAAAATAGGAAGGT
TAACAGTTTGTTGGGGGGGGGCACCCAATGGTATTATAATCAAGAGGGAG
AAAAATTTTTTGTAAAAGAAATGTGTTGTAAC
back to top