EY665296

Overview
NameEY665296
Unique NameEY665296
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.604e-16
Identity = 40/96 (41.67%), Postives = 62/96 (64.58%), Query Frame = 3
Query:  132 QFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            + + +++  ATN F ND ++G GGFG+VYK  +   +  VAIK+L   S QG  EF  E+  + +++H +LV L+GYC  G E +LVY++M  G+L
Sbjct:  875 KLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSV-VAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSL 969          

HSP 2 Score: 26.5646 bits (57), Expect = 1.604e-16
Identity = 19/53 (35.85%), Postives = 29/53 (54.72%), Query Frame = 1
Query:  454 LPWNQRLEICIGAPRGPPYLLLGQTRLYSFIGK-WKTTNILLEKKGGAKVSQF 609
            L W  R +I IGA RG  +  L    +   I +  K++N+LL++   A+VS F
Sbjct:  983 LNWPARRKIAIGAARGLAF--LHHNCIPHIIHRDMKSSNVLLDENLEARVSDF 1033          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.615e-16
Identity = 40/96 (41.67%), Postives = 60/96 (62.50%), Query Frame = 3
Query:  132 QFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            +F+ SE+   T N    L  G GGFG VY G +NGS   VA+K L   S QG  EF+ E+ +L ++ H++LV+L+GYC++     L+Y++M+ G L
Sbjct:  555 RFTYSEVMEMTKNLQRPL--GEGGFGVVYHGDLNGSEQ-VAVKLLSQTSAQGYKEFKAEVELLLRVHHINLVNLVGYCDEQDHFALIYEYMSNGDL 647          

HSP 2 Score: 29.6462 bits (65), Expect = 1.615e-16
Identity = 20/52 (38.46%), Postives = 28/52 (53.85%), Query Frame = 1
Query:  454 LPWNQRLEICIGAPRGPPYLLLGQTRLYSFIGKWKTTNILLEKKGGAKVSQF 609
            L W  RL+I I A  G  YL  G  +        K+TNILL+++  AK++ F
Sbjct:  660 LNWGTRLQIAIEAALGLEYLHTG-CKPAMVHRDVKSTNILLDEEFKAKIADF 710          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.629e-16
Identity = 39/96 (40.62%), Postives = 61/96 (63.54%), Query Frame = 3
Query:  132 QFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            +F   ++  AT  F  + V+G GGFG VY+G I  S+  +A+K++ P S QG  EF  EI  L +LRH +LV+L G+C    +++L+YD++  G+L
Sbjct:  350 RFRYRDLYKATEGFKENRVVGTGGFGIVYRGNIRSSSDQIAVKKITPNSMQGVREFVAEIESLGRLRHKNLVNLQGWCKHRNDLLLIYDYIPNGSL 445          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: CRK6_ARATH (Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.629e-16
Identity = 53/125 (42.40%), Postives = 74/125 (59.20%), Query Frame = 3
Query:   60 FFSSKTIKATKSSRGSFLPSDLCTQFSLS----EIQAATNNFDNDLVIGVGGFGNVYKG-FINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            F + K  K   ++  S +  D+ T  SL      IQ ATN+F     IG GGFG VYKG F NG    VA+KRL   S+QG  EF+TE+ ++++L+H +LV L+G+   G E ILVY++M   +L
Sbjct:  310 FLAKKKKKTFDTASASEVGDDMATADSLQLDYRTIQTATNDFAESNKIGRGGFGEVYKGTFSNGKE--VAVKRLSKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSL 432          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.629e-16
Identity = 48/128 (37.50%), Postives = 77/128 (60.16%), Query Frame = 3
Query:   48 LLGTFFSSKTIKATKSSRGSFLPSDLCTQFSLS----EIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            + G  F ++  + +  +  +F   D+ T  SL      IQ AT++F     IG GGFG VYKG ++  T  VA+KRL   S QG +EF+ E+ ++++L+H +LV L+G+C DG E +LVY+++   +L
Sbjct:  292 IAGYCFLTRRARKSYYTPSAFAGDDITTADSLQLDYRTIQTATDDFVESNKIGQGGFGEVYKGTLSDGTE-VAVKRLSKSSGQGEVEFKNEVVLVAKLQHRNLVRLLGFCLDGEERVLVYEYVPNKSL 418          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.629e-16
Identity = 42/97 (43.30%), Postives = 65/97 (67.01%), Query Frame = 3
Query:  135 FSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKR--LEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            F+  E++ A + F  + ++G G F  VYKG +   TT VA+KR  +  + Q+ + EF+TE+ +LS+L H HL+SL+GYC +  E +LVY+FMA G+L
Sbjct:  500 FTYEELEKAADGFKEESIVGKGSFSCVYKGVLRDGTT-VAVKRAIMSSDKQKNSNEFRTELDLLSRLNHAHLLSLLGYCEECGERLLVYEFMAHGSL 595          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.128e-16
Identity = 46/111 (41.44%), Postives = 69/111 (62.16%), Query Frame = 3
Query:   87 TKSSRGSFLPSDLCTQFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            T+ ++ S        +F L  I  ATN F  +  +G GGFG+VYKG +  S   +A+KRL   S QG LEF+ E+ +L++L+H +LV L+G+CN+G E ILVY+ +   +L
Sbjct:  312 TEINKNSDSDGQATLRFDLGMILIATNEFSLENKLGQGGFGSVYKGILP-SGQEIAVKRLAGGSGQGELEFKNEVLLLTRLQHRNLVKLLGFCNEGNEEILVYEHVPNSSL 421          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: CRK18_ARATH (Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.779e-16
Identity = 45/104 (43.27%), Postives = 71/104 (68.27%), Query Frame = 3
Query:  111 LPSDLCTQFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFI-NGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            LP++   QF L  I++AT+NF     +G GGFG VYKG + NG  T +A+KRL   S QG +EF+ E+ ++++L+H++LV L+G+   G E +LVY+F++  +L
Sbjct:  320 LPTE-SVQFDLKTIESATSNFSERNKLGKGGFGEVYKGMLMNG--TEIAVKRLSKTSGQGEVEFKNEVVVVAKLQHINLVRLLGFSLQGEEKLLVYEFVSNKSL 420          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.779e-16
Identity = 45/97 (46.39%), Postives = 63/97 (64.95%), Query Frame = 3
Query:  132 QFSLSEIQAATNNFDNDLVIGVGGFGNVYKG-FINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            Q     I+ AT NF     +G GGFG VYKG  +NG  T VA+KRL   S+QGA EF+ E+ ++++L+H +LV L+GYC +  E ILVY+F+   +L
Sbjct:  354 QLDFKTIEVATENFAKTNKLGQGGFGEVYKGTLVNG--TEVAVKRLSKTSEQGAQEFKNEVVLVAKLQHRNLVKLLGYCLEPEEKILVYEFVPNKSL 448          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.779e-16
Identity = 43/98 (43.88%), Postives = 62/98 (63.27%), Query Frame = 3
Query:  132 QFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPES--QQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            +FS  E++ AT  F  D  +G G F  V+KG +   T  VA+KR    S  ++ + EF  E+ +LS+L H HL++L+GYC DG E +LVY+FMA G+L
Sbjct:  492 EFSYEELEQATGGFSEDSQVGKGSFSCVFKGILRDGTV-VAVKRAIKASDVKKSSKEFHNELDLLSRLNHAHLLNLLGYCEDGSERLLVYEFMAHGSL 588          
The following BLAST results are available for this feature:
BLAST of EY665296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 174
Match NameE-valueIdentityDescription
BRI1_SOLLC1.604e-1641.67Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
MEE39_ARATH1.615e-1641.67Probable LRR receptor-like serine/threonine-protei... [more]
LRKA3_ARATH1.629e-1640.63Lectin-domain containing receptor kinase A4.3 OS=A... [more]
CRK6_ARATH1.629e-1642.40Cysteine-rich receptor-like protein kinase 6 OS=Ar... [more]
CRK10_ARATH1.629e-1637.50Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
ACR4_ARATH1.629e-1643.30Serine/threonine-protein kinase-like protein ACR4 ... [more]
CRK36_ARATH2.128e-1641.44Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
CRK18_ARATH2.779e-1643.27Cysteine-rich receptor-like protein kinase 18 OS=A... [more]
CRK12_ARATH2.779e-1646.39Putative cysteine-rich receptor-like protein kinas... [more]
CRI4_MAIZE2.779e-1643.88Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-C08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665296 ID=EY665296; Name=EY665296; organism=Citrus sinensis; type=EST; length=932bp
CACGCGTCCGGAAAGTCAAGGACTCGGGTTCCCGTACAGGTACTTCACTT
TTGGGGACTTTTTTTTCTTCTAAGACTATCAAGGCAACCAAGTCATCACG
CGGCTCATTCCTTCCTTCCGATCTTTGTACCCAATTTTCACTATCTGAAA
TCCAAGCGGCTACAAACAACTTCGACAATGATCTCGTAATTGGAGTTGGA
GGGTTTGGTAATGTCTACAAAGGCTTCATCAATGGCAGCACTACCCCTGT
TGCCATTAAACGACTGGAACCAGAGTCGCAACAGGGCGCCCTGGAATTCC
AAACTGAGATAGGAATGCTCTCGCAGCTCCGGCATCTTCACTTAGTCTCT
CTCATCGGCTATTGCAACGATGGCAGGGAGATGATCCTTGTATACGATTT
CATGGCTCGTGGGACTCTACGTGGATCATCTCTACCGTAGCGACAATCCT
CCTCTTCCATGGAATCAAAGGCTTGAAATCTGCATTGGTGCACCTCGTGG
GCCTCCCTATTTGCTACTGGGGCAAACCAGGCTGTATTCATTCATCGGGA
AGTGGAAAACAACCAACATCTTGTTGGAAAAAAAAGGGGGGGCCAAGGTT
TCCCAATTCGAACCCCCCCAATTTGGAACAACTTCCGGGCCCAAAACCTC
TGGGGAGTACGGTTGTAAAGGGGGAGGCGCGGAAAACTAAAAATCCGGAA
AAACAACCCGACTTCCCACAGTTTAATGGGAAAAACCTAGAACCCACACC
CCTTCCGGGGGGTTGGGGTGTGTCGAAAATTATTGGGGGGGCCCCGGCCC
CCCCATTTTCCCGGGGGAAAACACAAAAAAAAAAAAAAAAATAGGAAGGT
TAACAGTTTGTTGGGGGGGGGCACCCAATGGTATTATAATCAAGAGGGAG
AAAAATTTTTTGTAAAAGAAATGTGTTGTAAC
back to top