EY665296

Overview
NameEY665296
Unique NameEY665296
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY665296_ssr108 microsatellite EY665296_ssr108:108..119. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: ACCR3_ARATH (Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana GN=CCR3 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.779e-16
Identity = 49/120 (40.83%), Postives = 68/120 (56.67%), Query Frame = 3
Query:   75 TIKATKSSRGSFLPSDLCTQFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPES-----QQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            +++  +S   S   +D   +FS SE+ +AT NF  +  IG G FG VY+G +N     VAIKR E  +     Q+    F +EI  LS+L H HLV L+GYC +  E +LVYD+M  G L
Sbjct:  464 SMRRQRSGTSSMKHADKAEEFSFSELASATGNFSLENKIGSGSFGVVYRGKLNDGRE-VAIKRGEVNAKMKKFQEKETAFDSEIAFLSRLHHKHLVRLVGYCEEREEKLLVYDYMKNGAL 582          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.570e-16
Identity = 40/96 (41.67%), Postives = 60/96 (62.50%), Query Frame = 3
Query:  135 FSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRL-EPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            F+  E+  AT+ F +  ++G GGFGNVY+G   G  T VA+KRL +     G  +F+TE+ M+S   H +L+ LIGYC    E +LVY +M+ G++
Sbjct:  287 FTFRELHVATDGFSSKSILGAGGFGNVYRGKF-GDGTVVAVKRLKDVNGTSGNSQFRTELEMISLAVHRNLLRLIGYCASSSERLLVYPYMSNGSV 381          

HSP 2 Score: 28.1054 bits (61), Expect = 3.570e-16
Identity = 13/22 (59.09%), Postives = 14/22 (63.64%), Query Frame = 1
Query:  448 PPLPWNQRLEICIGAPRGPPYL 513
            P L WN R +I IGA RG  YL
Sbjct:  389 PALDWNTRKKIAIGAARGLFYL 410          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: CRK31_ARATH (Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana GN=CRK31 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.629e-16
Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = 3
Query:   72 KTIKATKSSRGSFLPSDLCTQFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            ++ K  K      + S    QF  + I+ AT+NF  +  +G GGFG VYKG +   T  +A+KRL   S QG  EF+ E+ ++++L+H +LV L+G+C +  E ILVY+F++  +L
Sbjct:  306 QSYKTLKYHTDDDMTSPQSLQFDFTTIEVATDNFSRNNKLGQGGFGEVYKGMLPNETE-IAVKRLSSNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCIERDEQILVYEFVSNKSL 420          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.629e-16
Identity = 44/96 (45.83%), Postives = 65/96 (67.71%), Query Frame = 3
Query:  132 QFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            QF + +I+AAT+NF     IG GGFG VYKG ++  T  VA+KRL   S QG LEF+ E+ ++++L+H +LV L+G+   G E ILV++F+   +L
Sbjct:  333 QFDIKDIEAATSNFLASNKIGQGGFGEVYKGTLSNGTE-VAVKRLSRTSDQGELEFKNEVLLVAKLQHRNLVRLLGFALQGEEKILVFEFVPNKSL 427          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.629e-16
Identity = 52/128 (40.62%), Postives = 76/128 (59.38%), Query Frame = 3
Query:   48 LLGTFFSSKTIKATKSSRGSFLPSDLCT---QFSLSEIQAATNNFDNDLVIGVGGFGNVYKG-FINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            L+  +  +K +K +  +  +F   D+ T   Q     I+AATN F  +  IG GGFG VYKG F NG  T VA+KRL   S QG  EF+ E+ ++++L+H +LV L+G+   G E ILVY++M   +L
Sbjct:  293 LIAGYCFAKRVKNSSDNAPAFDGDDITTESLQLDYRMIRAATNKFSENNKIGQGGFGEVYKGTFSNG--TEVAVKRLSKSSGQGDTEFKNEVVVVAKLQHRNLVRLLGFSIGGGERILVYEYMPNKSL 418          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 4.703e-16
Identity = 38/92 (41.30%), Postives = 58/92 (63.04%), Query Frame = 3
Query:  144 SEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            SE++ AT++F ++ +IG G +G VY G +N    P AIK+L+   Q    EF  ++ M+S+L+H + V L+GYC DG   IL Y+F   G+L
Sbjct:   64 SELKEATDDFGSNSLIGEGSYGRVYYGVLNNDL-PSAIKKLDSNKQPDN-EFLAQVSMVSRLKHDNFVQLLGYCVDGNSRILSYEFANNGSL 153          

HSP 2 Score: 32.7278 bits (73), Expect = 4.703e-16
Identity = 19/55 (34.55%), Postives = 31/55 (56.36%), Query Frame = 1
Query:  448 PPLPWNQRLEICIGAPRGPPYLLLGQTRLYSFIGKWKTTNILLEKKGGAKVSQFE 612
            P L W QR++I +GA RG  Y L  +   +      K++N+LL +   AK++ F+
Sbjct:  170 PVLSWYQRVKIAVGAARGLEY-LHEKANPHIIHRDIKSSNVLLFEDDVAKIADFD 223          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.740e-16
Identity = 41/96 (42.71%), Postives = 63/96 (65.62%), Query Frame = 3
Query:  132 QFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            Q+ L  I+AAT  F    ++G GGFG V+KG +   +  +A+KRL  ES QG  EFQ E  ++++L+H +LV ++G+C +G E ILVY+F+   +L
Sbjct:  308 QYDLKTIEAATCTFSKCNMLGQGGFGEVFKGVLQDGSE-IAVKRLSKESAQGVQEFQNETSLVAKLQHRNLVGVLGFCMEGEEKILVYEFVPNKSL 402          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.968e-16
Identity = 39/95 (41.05%), Postives = 62/95 (65.26%), Query Frame = 3
Query:  135 FSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            F+L +I+ AT++F+    IG GGFG V+KG +      VA+K+L  +S+QG  EF  EIG +S L+H +LV L G+C +  +++L Y++M   +L
Sbjct:  669 FTLRQIKFATDDFNPTNKIGEGGFGAVFKGVLADGRV-VAVKQLSSKSRQGNREFLNEIGAISCLQHPNLVKLHGFCVERAQLLLAYEYMENNSL 762          

HSP 2 Score: 31.187 bits (69), Expect = 5.968e-16
Identity = 19/54 (35.19%), Postives = 28/54 (51.85%), Query Frame = 1
Query:  451 PLPWNQRLEICIGAPRGPPYLLLGQTRLYSFIGK-WKTTNILLEKKGGAKVSQF 609
            P+ W  R +IC G  +G  +  L +     F+ +  K TNILL+K    K+S F
Sbjct:  775 PMDWPTRFKICCGIAKGLAF--LHEESPLKFVHRDIKATNILLDKDLTPKISDF 826          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.190e-16
Identity = 43/96 (44.79%), Postives = 65/96 (67.71%), Query Frame = 3
Query:  132 QFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            +F    I  AT++F  +  IG GGFG+VYKG + G    +A+KRL   S QG +EF+ E+ +L++L+H +LV L+G+CN+G E ILVY+F+   +L
Sbjct:  326 RFDFRMILTATDDFSFENKIGQGGFGSVYKGKLPGGEE-IAVKRLTRGSGQGEIEFRNEVLLLTRLQHRNLVKLLGFCNEGDEEILVYEFVPNSSL 420          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: CRK24_ARATH (Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 8.085e-16
Identity = 48/97 (49.48%), Postives = 63/97 (64.95%), Query Frame = 3
Query:  132 QFSLSEIQAATNNFDNDLVIGVGGFGNVYKG-FINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            QF    I+AAT NF N   +G GGFG VYKG F NG  T VA+KRL   S QG  EF+ E+ ++++L+H +LV L+GY   G E ILVY+F+   +L
Sbjct:  299 QFEFKAIEAATCNFHNVNKLGHGGFGEVYKGTFPNG--TEVAVKRLSKTSGQGEEEFKNEVFLVAKLQHRNLVKLLGYAVKGDEKILVYEFLPNKSL 393          
The following BLAST results are available for this feature:
BLAST of EY665296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 174
Match NameE-valueIdentityDescription
ACCR3_ARATH2.779e-1640.83Putative serine/threonine-protein kinase-like prot... [more]
Y2239_ARATH3.570e-1641.67Probable LRR receptor-like serine/threonine-protei... [more]
CRK31_ARATH3.629e-1637.93Putative cysteine-rich receptor-like protein kinas... [more]
CRK30_ARATH3.629e-1645.83Putative cysteine-rich receptor-like protein kinas... [more]
CRK15_ARATH3.629e-1640.63Cysteine-rich receptor-like protein kinase 15 OS=A... [more]
Y2706_ARATH4.703e-1641.30Probable receptor-like protein kinase At2g47060 OS... [more]
CRK33_ARATH4.740e-1642.71Putative cysteine-rich receptor-like protein kinas... [more]
RKF1_ARATH5.968e-1641.05Probable LRR receptor-like serine/threonine-protei... [more]
CRK38_ARATH6.190e-1644.79Cysteine-rich receptor-like protein kinase 38 OS=A... [more]
CRK24_ARATH8.085e-1649.48Cysteine-rich receptor-like protein kinase 24 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-C08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665296 ID=EY665296; Name=EY665296; organism=Citrus sinensis; type=EST; length=932bp
CACGCGTCCGGAAAGTCAAGGACTCGGGTTCCCGTACAGGTACTTCACTT
TTGGGGACTTTTTTTTCTTCTAAGACTATCAAGGCAACCAAGTCATCACG
CGGCTCATTCCTTCCTTCCGATCTTTGTACCCAATTTTCACTATCTGAAA
TCCAAGCGGCTACAAACAACTTCGACAATGATCTCGTAATTGGAGTTGGA
GGGTTTGGTAATGTCTACAAAGGCTTCATCAATGGCAGCACTACCCCTGT
TGCCATTAAACGACTGGAACCAGAGTCGCAACAGGGCGCCCTGGAATTCC
AAACTGAGATAGGAATGCTCTCGCAGCTCCGGCATCTTCACTTAGTCTCT
CTCATCGGCTATTGCAACGATGGCAGGGAGATGATCCTTGTATACGATTT
CATGGCTCGTGGGACTCTACGTGGATCATCTCTACCGTAGCGACAATCCT
CCTCTTCCATGGAATCAAAGGCTTGAAATCTGCATTGGTGCACCTCGTGG
GCCTCCCTATTTGCTACTGGGGCAAACCAGGCTGTATTCATTCATCGGGA
AGTGGAAAACAACCAACATCTTGTTGGAAAAAAAAGGGGGGGCCAAGGTT
TCCCAATTCGAACCCCCCCAATTTGGAACAACTTCCGGGCCCAAAACCTC
TGGGGAGTACGGTTGTAAAGGGGGAGGCGCGGAAAACTAAAAATCCGGAA
AAACAACCCGACTTCCCACAGTTTAATGGGAAAAACCTAGAACCCACACC
CCTTCCGGGGGGTTGGGGTGTGTCGAAAATTATTGGGGGGGCCCCGGCCC
CCCCATTTTCCCGGGGGAAAACACAAAAAAAAAAAAAAAAATAGGAAGGT
TAACAGTTTGTTGGGGGGGGGCACCCAATGGTATTATAATCAAGAGGGAG
AAAAATTTTTTGTAAAAGAAATGTGTTGTAAC
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