EY665296

Overview
NameEY665296
Unique NameEY665296
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.005e-15
Identity = 39/96 (40.62%), Postives = 60/96 (62.50%), Query Frame = 3
Query:  132 QFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            + + + +  ATN F  D +IG GGFG+VYK  +   +  VAIK+L   + QG  EF  E+  + +++H +LV L+GYC  G E +LVY++M  G+L
Sbjct:  845 KLTFAHLLEATNGFSADSMIGSGGFGDVYKAKLADGSV-VAIKKLIQVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKYGSL 939          

HSP 2 Score: 28.1054 bits (61), Expect = 1.005e-15
Identity = 19/53 (35.85%), Postives = 31/53 (58.49%), Query Frame = 1
Query:  454 LPWNQRLEICIGAPRGPPYLLLGQTRLYSFIGK-WKTTNILLEKKGGAKVSQF 609
            L W+ R +I IGA RG  +  L  + +   I +  K++N+LL++   A+VS F
Sbjct:  954 LDWSARKKIAIGAARGLAF--LHHSCIPHIIHRDMKSSNVLLDQDFVARVSDF 1004          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: IRAK1_MOUSE (Interleukin-1 receptor-associated kinase 1 OS=Mus musculus GN=Irak1 PE=1 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 1.016e-15
Identity = 49/134 (36.57%), Postives = 65/134 (48.51%), Query Frame = 3
Query:   51 LGTFFSSKTIKATKSSRGSFL-------PSDLCTQFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQ----QGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            LG    S    +TKSS  S +       PS  C  F   EI   T NF  +L IG GGFG VY+  +  +T   A+KRL+ E+          F TE+  LS+ RH ++V   GYC +     LVY F+  G+L
Sbjct:  167 LGPPLPSSAPSSTKSSPESPVSGLQRAHPSPFCWPFC--EISQGTCNFSEELRIGEGGFGCVYRAVMRNTT--YAVKRLKEEADLEWTMVKQSFLTEVEQLSRFRHPNIVDFAGYCAESGLYCLVYGFLPNGSL 296          

HSP 2 Score: 37.7354 bits (86), Expect = 1.016e-15
Identity = 24/75 (32.00%), Postives = 36/75 (48.00%), Query Frame = 1
Query:  427 HLYRSDNPPLPWNQRLEICIGAPRGPPYLLLGQTRLYSFIGKWKTTNILLEKKGGAKVSQFEPPQFGTTSGPKTS 651
            HL      PL W QRL+I +G  R   +L      L    G  K++N+LL+++   K+  F   +F   +G K S
Sbjct:  301 HLQTQACSPLSWPQRLDILLGTARAIQFLHQDSPSLIH--GDIKSSNVLLDERLMPKLGDFGLARFSRFAGAKAS 373          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.056e-15
Identity = 45/97 (46.39%), Postives = 65/97 (67.01%), Query Frame = 3
Query:  132 QFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPE-SQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            +FSL E+Q AT++F N  ++G GGFG VYKG +   T  VA+KRL+ E +  G L+FQTE+ M+S   H +L+ L G+C    E +LVY +MA G++
Sbjct:  292 RFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGTL-VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSV 387          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: CRK7_ARATH (Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana GN=CRK7 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.056e-15
Identity = 52/129 (40.31%), Postives = 75/129 (58.14%), Query Frame = 3
Query:   48 LLGTFFSSKTIKATKSSRGSFLPSDLCT----QFSLSEIQAATNNFDNDLVIGVGGFGNVYKG-FINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            + G  F +K  K T  +  +    D  T    Q     IQAATN+F  +  IG GGFG+VYKG F NG  T VA+KRL   S+QG  EF+ E+ +++ LRH +LV ++G+  +  E ILVY+++   +L
Sbjct:  291 IAGYCFFAKRAKKTYGTTPALDEDDKTTIESLQLDYRAIQAATNDFSENNKIGRGGFGDVYKGTFSNG--TEVAVKRLSKTSEQGDTEFKNEVVVVANLRHKNLVRILGFSIEREERILVYEYVENKSL 417          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 1.056e-15
Identity = 42/90 (46.67%), Postives = 64/90 (71.11%), Query Frame = 3
Query:  150 IQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            ++AAT+NF  +  +G GGFG+VYKG  +G    +A+KRL   S QG  EF+ EI +L++L+H +LV L+G+C +G+E ILVY+F+   +L
Sbjct:  354 LKAATDNFSPENELGRGGFGSVYKGVFSGGQE-IAVKRLSCTSGQGDSEFKNEILLLAKLQHRNLVRLLGFCIEGQERILVYEFIKNASL 442          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 1.056e-15
Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = 3
Query:  132 QFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            QF    I+AATN F     +G GGFG VYKG ++ S   VA+KRL   S QG  EF+ E+ ++++L+H +LV L+GYC +G E ILVY+F+   +L
Sbjct:  313 QFDFKAIEAATNCFLPINKLGQGGFGEVYKGTLS-SGLQVAVKRLSKTSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSL 407          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 1.056e-15
Identity = 46/97 (47.42%), Postives = 64/97 (65.98%), Query Frame = 3
Query:  132 QFSLSEIQAATNNFDNDLVIGVGGFGNVYKG-FINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            QF    I+AATNNF     +G GGFG V+KG F NG  T VA+KRL   S QG  EF+ E+ ++++L+H +LV L+G+  +G E ILVY++M   +L
Sbjct:  322 QFDFKAIEAATNNFQKSNKLGHGGFGEVFKGTFPNG--TEVAVKRLSKISGQGEEEFKNEVLLVAKLQHRNLVRLLGFSVEGEEKILVYEYMPNKSL 416          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: IRAK4_BOVIN (Interleukin-1 receptor-associated kinase 4 OS=Bos taurus GN=IRAK4 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.334e-15
Identity = 39/105 (37.14%), Postives = 65/105 (61.90%), Query Frame = 3
Query:  135 FSLSEIQAATNNFDNDLV------IGVGGFGNVYKGFINGSTTPVAIKRL----EPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            FS  E++  TNNFD   +      +G GGFG VYKG++N  T  VA+K+L    +  +++   +F  EI ++++ +H +LV L+G+ +DG ++ LVY +M  G+L
Sbjct:  169 FSFFELKDVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNRT--VAVKKLAAMVDISTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL 271          

HSP 2 Score: 34.6538 bits (78), Expect = 1.334e-15
Identity = 25/67 (37.31%), Postives = 32/67 (47.76%), Query Frame = 1
Query:  412 GLYVDHLYRSDN-PPLPWNQRLEICIGAPRGPPYLLLGQTRLYSFIGKWKTTNILLEKKGGAKVSQF 609
            G  +D L   D  PPL WN R +I  GA  G  YL       +      K+ NILL++   AK+S F
Sbjct:  269 GSLLDRLSCLDGTPPLSWNMRCKIAQGAANGLSYL----HENHHIHRDIKSANILLDEDFTAKISDF 331          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.379e-15
Identity = 44/116 (37.93%), Postives = 68/116 (58.62%), Query Frame = 3
Query:   72 KTIKATKSSRGSFLPSDLCTQFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            ++ K  K      + S    QF    ++AAT+ F  +  +G GGFG VYKG +   T  VA+KRL   S QG  EF+ E+ ++++L+H +LV L+G+C +  E ILVY+F+   +L
Sbjct:  288 QSYKTLKPKTDDDMTSPQSLQFDFMTLEAATDKFSRNNKLGKGGFGEVYKGMLPNETE-VAVKRLSSNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCLERDEQILVYEFVPNKSL 402          
BLAST of EY665296 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.379e-15
Identity = 46/96 (47.92%), Postives = 61/96 (63.54%), Query Frame = 3
Query:  132 QFSLSEIQAATNNFDNDLVIGVGGFGNVYKGFINGSTTPVAIKRLEPESQQGALEFQTEIGMLSQLRHLHLVSLIGYCNDGREMILVYDFMARGTL 419
            QF    I AATNNF     +G GGFG VYKG    S   VA+KRL   S QG  EF+ E+ ++++L+H +LV L+GYC +G E ILVY+F+   +L
Sbjct:  495 QFDFKAIVAATNNFLPINKLGQGGFGEVYKGTFP-SGVQVAVKRLSKTSGQGEREFENEVVVVAKLQHRNLVRLLGYCLEGEEKILVYEFVHNKSL 589          
The following BLAST results are available for this feature:
BLAST of EY665296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 174
Match NameE-valueIdentityDescription
BRL3_ARATH1.005e-1540.63Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
IRAK1_MOUSE1.016e-1536.57Interleukin-1 receptor-associated kinase 1 OS=Mus ... [more]
SERK2_ARATH1.056e-1546.39Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
CRK7_ARATH1.056e-1540.31Cysteine-rich receptor-like protein kinase 7 OS=Ar... [more]
CRK28_ARATH1.056e-1546.67Cysteine-rich receptor-like protein kinase 28 OS=A... [more]
CRK19_ARATH1.056e-1546.88Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
CRK16_ARATH1.056e-1547.42Putative cysteine-rich receptor-like protein kinas... [more]
IRAK4_BOVIN1.334e-1537.14Interleukin-1 receptor-associated kinase 4 OS=Bos ... [more]
CRK32_ARATH1.379e-1537.93Putative cysteine-rich receptor-like protein kinas... [more]
CRK23_ARATH1.379e-1547.92Putative cysteine-rich receptor-like protein kinas... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-C08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665296 ID=EY665296; Name=EY665296; organism=Citrus sinensis; type=EST; length=932bp
CACGCGTCCGGAAAGTCAAGGACTCGGGTTCCCGTACAGGTACTTCACTT
TTGGGGACTTTTTTTTCTTCTAAGACTATCAAGGCAACCAAGTCATCACG
CGGCTCATTCCTTCCTTCCGATCTTTGTACCCAATTTTCACTATCTGAAA
TCCAAGCGGCTACAAACAACTTCGACAATGATCTCGTAATTGGAGTTGGA
GGGTTTGGTAATGTCTACAAAGGCTTCATCAATGGCAGCACTACCCCTGT
TGCCATTAAACGACTGGAACCAGAGTCGCAACAGGGCGCCCTGGAATTCC
AAACTGAGATAGGAATGCTCTCGCAGCTCCGGCATCTTCACTTAGTCTCT
CTCATCGGCTATTGCAACGATGGCAGGGAGATGATCCTTGTATACGATTT
CATGGCTCGTGGGACTCTACGTGGATCATCTCTACCGTAGCGACAATCCT
CCTCTTCCATGGAATCAAAGGCTTGAAATCTGCATTGGTGCACCTCGTGG
GCCTCCCTATTTGCTACTGGGGCAAACCAGGCTGTATTCATTCATCGGGA
AGTGGAAAACAACCAACATCTTGTTGGAAAAAAAAGGGGGGGCCAAGGTT
TCCCAATTCGAACCCCCCCAATTTGGAACAACTTCCGGGCCCAAAACCTC
TGGGGAGTACGGTTGTAAAGGGGGAGGCGCGGAAAACTAAAAATCCGGAA
AAACAACCCGACTTCCCACAGTTTAATGGGAAAAACCTAGAACCCACACC
CCTTCCGGGGGGTTGGGGTGTGTCGAAAATTATTGGGGGGGCCCCGGCCC
CCCCATTTTCCCGGGGGAAAACACAAAAAAAAAAAAAAAAATAGGAAGGT
TAACAGTTTGTTGGGGGGGGGCACCCAATGGTATTATAATCAAGAGGGAG
AAAAATTTTTTGTAAAAGAAATGTGTTGTAAC
back to top