EY665295

Overview
NameEY665295
Unique NameEY665295
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length962
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: HAOX2_MOUSE (Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.499e-25
Identity = 69/170 (40.59%), Postives = 93/170 (54.71%), Query Frame = 1
Query:   67 LNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVL-SFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKKEANIKKKIDL 573
            L +F+  A+  L K  +DF  G A+D  T  +N+ AF RI  R R L DVS+ID  TTI   +I+API I+PTA H +A  +GE +TA+AA   N   V+ S+                 ++QLYV    DI   +VQR E  GFKALV+  D P LG +  N +  +DL
Sbjct:    6 LADFKAQAQKQLSKTSWDFIEGEADDGITYNDNLAAFRRIRLRPRYLRDVSKIDTRTTIQGQEINAPICISPTAFHSIAWADGEKSTAKAAQKANICYVISSYASYTVEDIVAAAPGGLHWFQLYVQPDWDINKQMVQRIEALGFKALVVTVDAPVLGNRRGNKRSLLDL 175          
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: CYB2_YEAST (Cytochrome b2, mitochondrial OS=Saccharomyces cerevisiae GN=CYB2 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 8.484e-24
Identity = 67/174 (38.51%), Postives = 94/174 (54.02%), Query Frame = 1
Query:   61 VNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANP-EGEVATARAAASCNT-----IMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKKEANIKKK 564
            +NL +F+ LA   L K  + +Y+ GA DE T +EN  A+HRI F+ +ILVDV ++D+ST +L   +  P  ++ TAL KL NP EGE   AR      T     I  L+                 ++YQLYV   R IT  LV+  E+ G KAL +  D P LG++E ++K K
Sbjct:  203 INLYDFEYLASQTLTKQAWAYYSSGANDEVTHRENHNAYHRIFFKPKILVDVRKVDISTDMLGSHVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLK 376          
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: MDLB_PSEPU ((S)-mandelate dehydrogenase OS=Pseudomonas putida GN=mdlB PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.691e-20
Identity = 58/176 (32.95%), Postives = 91/176 (51.70%), Query Frame = 1
Query:   46 MAAEPVNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKKEANIKKKIDL 573
            M+    N+ ++++L +  LPKM YD+  GGAEDE+ +K N + F +  F+ + LVDVSR  L   +L  + S P++I PT L+    P+G++A ARAA       VLS                  ++QLYV   R+I   +V +A   G+  LVL  D    G +E ++  +  +
Sbjct:    1 MSQNLFNVEDYRKLRQKRLPKMVYDYLEGGAEDEYGVKHNRDVFQQWRFKPKRLVDVSRRSLQAEVLGKRQSMPLLIGPTGLNGALWPKGDLALARAATKAGIPFVLSTASNMSIEDLARQCDGDLWFQLYVI-HREIAQGMVLKALHTGYTTLVLTTDVAVNGYRERDLHNRFKI 175          
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_AGRVS (L-lactate dehydrogenase [cytochrome] OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=lldD PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.889e-17
Identity = 47/157 (29.94%), Postives = 76/157 (48.41%), Query Frame = 1
Query:   73 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            +++E AR  LP   + +  GGA  EHT++ N++    +  R R+L  V  +D+STT+ D +++ P+++AP  L  +    GEV  ARAA      + LS                  ++QLYV + R      ++RA   G + LV   D P  G +
Sbjct:    8 DYREAARRRLPPFLFHYIDGGAYSEHTMRRNIDDLADLALRQRVLKSVGTVDISTTLFDEELAMPVVLAPVGLTGMYARRGEVQAARAAEKKGIPLTLSTVSVCPIEEVQAASNRPIWFQLYVLRDRGFMKNALERAWAAGIRKLVFTVDMPVPGAR 164          
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_CAUSK (L-lactate dehydrogenase [cytochrome] OS=Caulobacter sp. (strain K31) GN=lldD PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.923e-16
Identity = 53/157 (33.76%), Postives = 74/157 (47.13%), Query Frame = 1
Query:   73 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            +F+E AR  LP+  +D+  GGA  E TL  NV     I+ R R+L DVSR+   TT+   + + P+ +AP  L  +    GEV  ARAAA+      LS                  ++QLY+ + R     L+ RA   G  ALV   D P  G +
Sbjct:    8 DFREAARRQLPRFLFDYIDGGAYAERTLARNVSDLADISLRQRVLKDVSRVSTRTTLFGVEQTLPVALAPVGLTGMYARRGEVQAARAAAAKGVPFCLSTVSVCDLAEVSRASSAPIWFQLYMLRDRGFMRDLLARAADAGATALVFTVDMPVPGAR 164          
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_PSEPG (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas putida (strain GB-1) GN=lldD PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.817e-16
Identity = 50/157 (31.85%), Postives = 74/157 (47.13%), Query Frame = 1
Query:   73 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            +++  A+  LP   + +  GGA  EHTL+ NV     I  R R+L ++S + LST + D  +S P+ +AP  L  +    GEV  ARAAA+      +S                  ++QLYV K R      ++RA+  G K LV   D P  G +
Sbjct:    8 DYRAAAQRKLPPFLFHYADGGAYAEHTLRHNVSDLASIALRQRVLNNMSELSLSTRLFDETLSMPVALAPVGLTGMYARRGEVQAARAAAAHGIPFTMSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGVKTLVFTVDMPVPGAR 164          
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_CAUCR (L-lactate dehydrogenase [cytochrome] OS=Caulobacter crescentus GN=lldD PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.817e-16
Identity = 51/157 (32.48%), Postives = 74/157 (47.13%), Query Frame = 1
Query:   73 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            +F+E AR  LP+  +D+  GGA  E T+  N++    I  R R+L+DVS +D STT+   + + P+ +AP  L  +    GE   ARAAA+      LS                  ++QLYV + R     L+ RA   G   LV   D P  G +
Sbjct:    8 DFREAARRRLPRFLFDYIDGGAYAERTMARNIDDLADIALRQRVLMDVSVVDPSTTLFGVRQALPVALAPVGLTGMYARRGECQAARAAAAKGVPFCLSTVSVCDVDEVRAASATPFWFQLYVLRDRGFMRDLLARASAAGATTLVFTVDMPVPGAR 164          
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_CAUCN (L-lactate dehydrogenase [cytochrome] OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=lldD PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.817e-16
Identity = 51/157 (32.48%), Postives = 74/157 (47.13%), Query Frame = 1
Query:   73 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            +F+E AR  LP+  +D+  GGA  E T+  N++    I  R R+L+DVS +D STT+   + + P+ +AP  L  +    GE   ARAAA+      LS                  ++QLYV + R     L+ RA   G   LV   D P  G +
Sbjct:    8 DFREAARRRLPRFLFDYIDGGAYAERTMARNIDDLADIALRQRVLMDVSVVDPSTTLFGVRQALPVALAPVGLTGMYARRGECQAARAAAAKGVPFCLSTVSVCDVDEVRAASATPFWFQLYVLRDRGFMRDLLARASAAGATTLVFTVDMPVPGAR 164          
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_XANP2 (L-lactate dehydrogenase [cytochrome] OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=lldD PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.985e-16
Identity = 51/158 (32.28%), Postives = 74/158 (46.84%), Query Frame = 1
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++E AR  LP   + +  GGA  E TL+ NVE    +  R R+L  V  +DLSTT+L  ++S P+ +AP  L  +    GEV  A+AA        LS                  ++QLYV K R      ++RA   G + LV   D P  G +
Sbjct:    7 SDYREAARRRLPPFLFHYIDGGAYAEATLRRNVEDLSDLALRQRVLKSVGEVDLSTTLLKQQLSMPVGLAPVGLTGMYARRGEVQAAQAATQKGIPFTLSTVSVCSIEEVQSQVGKPIWFQLYVLKDRGFMKNALERAWAAGIRTLVFTVDMPVPGAR 164          
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_CHRSD (L-lactate dehydrogenase [cytochrome] OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=lldD PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.985e-16
Identity = 50/157 (31.85%), Postives = 74/157 (47.13%), Query Frame = 1
Query:   73 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            +++  A+  LP   + +  GGA  EHTL+ NVE    I  R R+L D+S + L T +    ++ P+ +AP  L  +    GEV  ARAAAS      LS                  ++QLYV + R     +++RA+  G K LV   D P  G +
Sbjct:    8 DYRHAAKRRLPPFLFHYADGGAYAEHTLRRNVEDLAGIALRQRVLKDMSHLSLETELFGEPLAMPVALAPVGLAGMYARRGEVQAARAAASKGIPFTLSTVSVCPIAEVASAIERPLWFQLYVLRDRGFMKHVLERAKAAGVKTLVFTVDMPVPGAR 164          
The following BLAST results are available for this feature:
BLAST of EY665295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
HAOX2_MOUSE4.499e-2540.59Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2... [more]
CYB2_YEAST8.484e-2438.51Cytochrome b2, mitochondrial OS=Saccharomyces cere... [more]
MDLB_PSEPU5.691e-2032.95(S)-mandelate dehydrogenase OS=Pseudomonas putida ... [more]
LLDD_AGRVS5.889e-1729.94L-lactate dehydrogenase [cytochrome] OS=Agrobacter... [more]
LLDD_CAUSK2.923e-1633.76L-lactate dehydrogenase [cytochrome] OS=Caulobacte... [more]
LLDD_PSEPG3.817e-1631.85L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_CAUCR3.817e-1632.48L-lactate dehydrogenase [cytochrome] OS=Caulobacte... [more]
LLDD_CAUCN3.817e-1632.48L-lactate dehydrogenase [cytochrome] OS=Caulobacte... [more]
LLDD_XANP24.985e-1632.28L-lactate dehydrogenase [cytochrome] OS=Xanthobact... [more]
LLDD_CHRSD4.985e-1631.85L-lactate dehydrogenase [cytochrome] OS=Chromohalo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-C07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665295 ID=EY665295; Name=EY665295; organism=Citrus sinensis; type=EST; length=962bp
CGATCGACCTTCATCAGTTGAAATTTTTAGTCATTCGGGTTCCAAATGGC
AGCTGAACCTGTTAATTTGAATGAGTTCCAAGAATTGGCAAGGCTGGCCC
TTCCAAAAATGTATTATGATTTCTACGCTGGTGGAGCAGAAGATGAACAT
ACCCTAAAAGAGAATGTGGAAGCCTTTCATAGAATTACGTTTCGGTCAAG
AATTCTTGTCGATGTCAGCAGAATTGATTTATCGACTACCATACTTGATT
ACAAAATCTCGGCTCCCATTATCATTGCTCCAACGGCTTTGCATAAGCTT
GCAAACCCTGAAGGAGAGGTAGCCACAGCCAGAGCAGCAGCTTCATGTAA
CACCATAATGGTTTTATCCTTCACATCTAGCAGCTCCATAGAGGAGGTTG
CGGCCAGCTCCAATGCTGTTCGCTTCTATCAATTATATGTATTCAAGAAA
CGAGATATAACAGCTACTCTAGTGCAAAGAGCTGAAAGGAAGGGTTTTAA
GGCTCTTGTCCTACCGGCTGATACTCCAAAACTTGGGAAAAAGGAGGCAA
ATATAAAAAAAAAAATTGATTTAAACCCCCCCTTTGTAAAACATATGNAN
GGCCNCTNNNNNNNCNNNNNNCNCGCCCNNNNCCCNCNCCCAAATTCNCA
ACCCCCCCCCCCCCCCCCCCCCCCGCNNCCCCCCCCNNNCNNNCNCNNCG
GGNNNCCCAACGGCCCCNNCCCCCCNCCCCCCCCCTCCCCCCTTTTTTTT
CCCCGGGGGTATTCTTTTCCCCCGGGGAAAAAAGGGCAAAAAAAAACCGT
GGGGGGAAAATAAGGGGGGTTGTGGTGGGGGATTTTTTTTGGCCCCCCCA
ATCCCCCGGGGCACCCCCCCCCCAACAGTTTAATTAAATTATTTTCACCC
CCCCCGCCCCCCCTTTTTTTTCTTCTCTCGGCCCCCGTGGGGAAAAAAAA
AGAGGGGTGGGG
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