EY665295

Overview
NameEY665295
Unique NameEY665295
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length962
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_KLEP7 (L-lactate dehydrogenase [cytochrome] OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=lldD PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.959e-14
Identity = 47/158 (29.75%), Postives = 72/158 (45.57%), Query Frame = 1
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++  A+  LP   + +  GGA  EHTL+ NVE    +  R RIL ++S + L TT+ + K++ P  +AP  L  +    GEV  A AA        LS                  ++QLYV + R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYRAAAQRILPPFLFHYIDGGAYAEHTLRRNVEDLSDVALRQRILRNMSDLSLETTLFNEKLAMPTALAPVGLCGMYARRGEVQAAGAADDKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGAR 164          
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_KLEP3 (L-lactate dehydrogenase [cytochrome] OS=Klebsiella pneumoniae (strain 342) GN=lldD PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.959e-14
Identity = 47/158 (29.75%), Postives = 72/158 (45.57%), Query Frame = 1
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++  A+  LP   + +  GGA  EHTL+ NVE    +  R RIL ++S + L TT+ + K++ P  +AP  L  +    GEV  A AA        LS                  ++QLYV + R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYRAAAQRILPPFLFHYIDGGAYAEHTLRRNVEDLSDVALRQRILRNMSDLSLETTLFNEKLAMPTALAPVGLCGMYARRGEVQAAGAADDKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGAR 164          
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_HAEIN (L-lactate dehydrogenase [cytochrome] OS=Haemophilus influenzae GN=lldD PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.959e-14
Identity = 47/158 (29.75%), Postives = 70/158 (44.30%), Query Frame = 1
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++E AR  +P   + +  GG+  E TL  NV     I  R R+L D+S +D S  +   K+S P I+AP     +    GEV  A+AA +      LS                  ++QLYV K R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYREAARRRVPPFMFHYADGGSYAEQTLARNVSDLENIALRQRVLKDMSELDTSIELFGEKLSMPTILAPVGACGMYARRGEVQAAQAADNKGVPFTLSTVSICPIEEVAPAIKRPMWFQLYVLKDRGFMKNALERAKAAGCSTLVFTVDMPTPGAR 164          
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_HAEIG (L-lactate dehydrogenase [cytochrome] OS=Haemophilus influenzae (strain PittGG) GN=lldD PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.959e-14
Identity = 47/158 (29.75%), Postives = 70/158 (44.30%), Query Frame = 1
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++E AR  +P   + +  GG+  E TL  NV     I  R R+L D+S +D S  +   K+S P I+AP     +    GEV  A+AA +      LS                  ++QLYV K R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYREAARRRVPPFMFHYADGGSYAEQTLARNVSDLENIALRQRVLKDMSELDTSIELFGEKLSMPTILAPVGACGMYARRGEVQAAQAADNKGVPFTLSTVSICPIEEVAPAIKRPMWFQLYVLKDRGFMKNALERAKAAGCSTLVFTVDMPTPGAR 164          
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_HAEIE (L-lactate dehydrogenase [cytochrome] OS=Haemophilus influenzae (strain PittEE) GN=lldD PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.959e-14
Identity = 47/158 (29.75%), Postives = 70/158 (44.30%), Query Frame = 1
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++E AR  +P   + +  GG+  E TL  NV     I  R R+L D+S +D S  +   K+S P I+AP     +    GEV  A+AA +      LS                  ++QLYV K R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYREAARRRVPPFMFHYADGGSYAEQTLARNVSDLENIALRQRVLKDMSELDTSIELFGEKLSMPTILAPVGACGMYARRGEVQAAQAADNKGVPFTLSTVSICPIEEVAPAIKRPMWFQLYVLKDRGFMKNALERAKAAGCSTLVFTVDMPTPGAR 164          
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_HAEI8 (L-lactate dehydrogenase [cytochrome] OS=Haemophilus influenzae (strain 86-028NP) GN=lldD PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.959e-14
Identity = 47/158 (29.75%), Postives = 70/158 (44.30%), Query Frame = 1
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++E AR  +P   + +  GG+  E TL  NV     I  R R+L D+S +D S  +   K+S P I+AP     +    GEV  A+AA +      LS                  ++QLYV K R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYREAARRRVPPFMFHYADGGSYAEQTLARNVSDLENIALRQRVLKDMSELDTSIELFGEKLSMPTILAPVGACGMYARRGEVQAAQAADNKGVPFTLSTVSICPIEEVAPAIKRPMWFQLYVLKDRGFMKNALERAKAAGCSTLVFTVDMPTPGAR 164          
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_HAEDU (L-lactate dehydrogenase [cytochrome] OS=Haemophilus ducreyi GN=lldD PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.959e-14
Identity = 45/158 (28.48%), Postives = 73/158 (46.20%), Query Frame = 1
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            N+++E AR  +P   + +  GG+  E TL  NV     +  R R+L D+S+++    +   K++ PI++AP     +    GEV  A+AA +      LS                  +YQLYV K R    ++++RA+  G   LV   D P  G +
Sbjct:    7 NDYREAARRRVPPFMFHYADGGSFSERTLARNVSDLADLALRQRVLKDMSQLNTEIELFGEKLAMPIVLAPVGALGMYARRGEVQAAQAAENKGLPFTLSTVSVCPIEEVTPAIKRPMWYQLYVLKDRGFMKSVLERAKAAGCSTLVFTVDMPTPGAR 164          
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_BARQU (L-lactate dehydrogenase [cytochrome] OS=Bartonella quintana GN=lldD PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.959e-14
Identity = 45/157 (28.66%), Postives = 72/157 (45.86%), Query Frame = 1
Query:   73 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++ A+  LP   + +  GGA  E T++ N      +  R RIL  V  +DLS  + D +++ PI++AP  L  +    GEV  ARAA +      LS                  ++QLYV K R     +++R+   G + LV   D P  G +
Sbjct:    8 DYRKAAKRRLPPFLFHYIDGGAYAEETMRRNYADLQALALRQRILRQVGEVDLSIKLFDQRLNLPIVLAPVGLTGMYARRGEVKAARAAVAKGIPFTLSSVSVCSLAEVHAEVGSGFWFQLYVLKDRGFMRDVLERSWLAGVRTLVFTVDMPVPGAR 164          
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_STRMK (L-lactate dehydrogenase [cytochrome] OS=Stenotrophomonas maltophilia (strain K279a) GN=lldD PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.040e-13
Identity = 48/157 (30.57%), Postives = 69/157 (43.95%), Query Frame = 1
Query:   73 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            +++  A   LP   + +  GGA  EHTLK NV     I  R RIL ++S + L T +    ++ P+ +AP  L  +    GEV  ARAA S      LS                  ++QLYV + R      ++RA+  G   LV   D P  G +
Sbjct:    8 DYRAAAERRLPPFLFHYIDGGAYAEHTLKRNVSDLSDIALRQRILRNMSDLSLETELFGETLAMPVALAPVGLTGMYARRGEVQAARAADSRGIPFTLSTVSVCPIEEVAPAIQRPMWFQLYVLRDRGFMRNALERAQAAGVTTLVFTVDMPVPGAR 164          
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_STRM5 (L-lactate dehydrogenase [cytochrome] OS=Stenotrophomonas maltophilia (strain R551-3) GN=lldD PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.040e-13
Identity = 47/157 (29.94%), Postives = 70/157 (44.59%), Query Frame = 1
Query:   73 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            +++  A+  LP   + +  GGA  EHTLK NV     I  R R+L ++S + L T +    ++ P+ +AP  L  +    GEV  ARAA S      LS                  ++QLYV + R      ++RA+  G   LV   D P  G +
Sbjct:    8 DYRAAAQRRLPPFLFHYIDGGAYAEHTLKRNVSDLSDIALRQRVLRNMSDLSLETELFGETLAMPVALAPVGLTGMYARRGEVQAARAADSRGIPFTLSTVSVCPIEEVAPAIQRPMWFQLYVLRDRGFMRNALERAQAAGVTTLVFTVDMPVPGAR 164          
The following BLAST results are available for this feature:
BLAST of EY665295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
LLDD_KLEP77.959e-1429.75L-lactate dehydrogenase [cytochrome] OS=Klebsiella... [more]
LLDD_KLEP37.959e-1429.75L-lactate dehydrogenase [cytochrome] OS=Klebsiella... [more]
LLDD_HAEIN7.959e-1429.75L-lactate dehydrogenase [cytochrome] OS=Haemophilu... [more]
LLDD_HAEIG7.959e-1429.75L-lactate dehydrogenase [cytochrome] OS=Haemophilu... [more]
LLDD_HAEIE7.959e-1429.75L-lactate dehydrogenase [cytochrome] OS=Haemophilu... [more]
LLDD_HAEI87.959e-1429.75L-lactate dehydrogenase [cytochrome] OS=Haemophilu... [more]
LLDD_HAEDU7.959e-1428.48L-lactate dehydrogenase [cytochrome] OS=Haemophilu... [more]
LLDD_BARQU7.959e-1428.66L-lactate dehydrogenase [cytochrome] OS=Bartonella... [more]
LLDD_STRMK1.040e-1330.57L-lactate dehydrogenase [cytochrome] OS=Stenotroph... [more]
LLDD_STRM51.040e-1329.94L-lactate dehydrogenase [cytochrome] OS=Stenotroph... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-C07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665295 ID=EY665295; Name=EY665295; organism=Citrus sinensis; type=EST; length=962bp
CGATCGACCTTCATCAGTTGAAATTTTTAGTCATTCGGGTTCCAAATGGC
AGCTGAACCTGTTAATTTGAATGAGTTCCAAGAATTGGCAAGGCTGGCCC
TTCCAAAAATGTATTATGATTTCTACGCTGGTGGAGCAGAAGATGAACAT
ACCCTAAAAGAGAATGTGGAAGCCTTTCATAGAATTACGTTTCGGTCAAG
AATTCTTGTCGATGTCAGCAGAATTGATTTATCGACTACCATACTTGATT
ACAAAATCTCGGCTCCCATTATCATTGCTCCAACGGCTTTGCATAAGCTT
GCAAACCCTGAAGGAGAGGTAGCCACAGCCAGAGCAGCAGCTTCATGTAA
CACCATAATGGTTTTATCCTTCACATCTAGCAGCTCCATAGAGGAGGTTG
CGGCCAGCTCCAATGCTGTTCGCTTCTATCAATTATATGTATTCAAGAAA
CGAGATATAACAGCTACTCTAGTGCAAAGAGCTGAAAGGAAGGGTTTTAA
GGCTCTTGTCCTACCGGCTGATACTCCAAAACTTGGGAAAAAGGAGGCAA
ATATAAAAAAAAAAATTGATTTAAACCCCCCCTTTGTAAAACATATGNAN
GGCCNCTNNNNNNNCNNNNNNCNCGCCCNNNNCCCNCNCCCAAATTCNCA
ACCCCCCCCCCCCCCCCCCCCCCCGCNNCCCCCCCCNNNCNNNCNCNNCG
GGNNNCCCAACGGCCCCNNCCCCCCNCCCCCCCCCTCCCCCCTTTTTTTT
CCCCGGGGGTATTCTTTTCCCCCGGGGAAAAAAGGGCAAAAAAAAACCGT
GGGGGGAAAATAAGGGGGGTTGTGGTGGGGGATTTTTTTTGGCCCCCCCA
ATCCCCCGGGGCACCCCCCCCCCAACAGTTTAATTAAATTATTTTCACCC
CCCCCGCCCCCCCTTTTTTTTCTTCTCTCGGCCCCCGTGGGGAAAAAAAA
AGAGGGGTGGGG
back to top