EY665295

Overview
NameEY665295
Unique NameEY665295
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length962
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_ECO81 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O81 (strain ED1a) GN=lldD PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.228e-14
Identity = 46/158 (29.11%), Postives = 74/158 (46.84%), Query Frame = 1 
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ + P  L  +    GEV  A+AA +      LS                  ++QLYV + R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGAR 164
[Close]
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_ECO7I (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.228e-14
Identity = 46/158 (29.11%), Postives = 74/158 (46.84%), Query Frame = 1 
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ + P  L  +    GEV  A+AA +      LS                  ++QLYV + R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGAR 164
[Close]
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_ECO45 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.228e-14
Identity = 46/158 (29.11%), Postives = 74/158 (46.84%), Query Frame = 1 
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ + P  L  +    GEV  A+AA +      LS                  ++QLYV + R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGAR 164
[Close]
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_ACIAD (L-lactate dehydrogenase [cytochrome] OS=Acinetobacter sp. (strain ADP1) GN=lldD PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.228e-14
Identity = 47/158 (29.75%), Postives = 73/158 (46.20%), Query Frame = 1 
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            N+++E A+  LP   + +  GGA  E+TLK NVE   +I  R R+L D+S + L T + +  +S P+ ++P  L  +    GEV  A AA        +S                  ++QLYV + R      ++RA+  G   LV   D P  G +
Sbjct:    7 NDYREAAKRRLPPFLFHYIDGGAYAEYTLKRNVEDLSQIALRQRVLNDMSSLSLETKLFNETLSMPVALSPVGLTGMYARRGEVQAAVAADKKGIPFTMSTVSVCPIEEVTPAIKRPMWFQLYVLRDRGFMKNALERAKAAGCSTLVFTVDMPVPGAR 164
[Close]
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_XANCP (L-lactate dehydrogenase [cytochrome] OS=Xanthomonas campestris pv. campestris GN=lldD PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.604e-14
Identity = 48/158 (30.38%), Postives = 72/158 (45.57%), Query Frame = 1 
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++  A   LP   + +  GGA  EHTL+ NV     I  R R+L ++S + LST +    ++ P+ +AP  L  +    GEV  ARAAA+      LS                  ++QLYV K R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYRAAAEARLPPFLFHYIDGGAYAEHTLRRNVSDLADIALRQRVLRNMSDLSLSTELFGETLAMPVALAPVGLTGMYARRGEVQAARAAAARGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKTAGVTTLVFTVDMPTPGAR 164
[Close]
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_XANCB (L-lactate dehydrogenase [cytochrome] OS=Xanthomonas campestris pv. campestris (strain B100) GN=lldD PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.604e-14
Identity = 48/158 (30.38%), Postives = 72/158 (45.57%), Query Frame = 1 
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++  A   LP   + +  GGA  EHTL+ NV     I  R R+L ++S + LST +    ++ P+ +AP  L  +    GEV  ARAAA+      LS                  ++QLYV K R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYRAAAEARLPPFLFHYMDGGAYAEHTLRRNVSDLADIALRQRVLRNMSDLSLSTELFGETLAMPVALAPVGLTGMYARRGEVQAARAAAARGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGVTTLVFTVDMPTPGAR 164
[Close]
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_XANC8 (L-lactate dehydrogenase [cytochrome] OS=Xanthomonas campestris pv. campestris (strain 8004) GN=lldD PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.604e-14
Identity = 48/158 (30.38%), Postives = 72/158 (45.57%), Query Frame = 1 
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++  A   LP   + +  GGA  EHTL+ NV     I  R R+L ++S + LST +    ++ P+ +AP  L  +    GEV  ARAAA+      LS                  ++QLYV K R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYRAAAEARLPPFLFHYIDGGAYAEHTLRRNVSDLADIALRQRVLRNMSDLSLSTELFGETLAMPVALAPVGLTGMYARRGEVQAARAAAARGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKTAGVTTLVFTVDMPTPGAR 164
[Close]
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_AZOC5 (L-lactate dehydrogenase [cytochrome] OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=lldD PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.604e-14
Identity = 45/158 (28.48%), Postives = 73/158 (46.20%), Query Frame = 1 
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            N+++  A+  LP   + +  GGA  E+TL+ NVE    I  R ++L +V+ + L T +   K++ P+ +AP  L  +    GEV  A+AA +      LS                  ++QLYV K R      ++RA+  G   L+   D P  G +
Sbjct:    7 NDYRAAAKSRLPPFLFHYVDGGAYAEYTLRRNVEDLSHIALRQQVLRNVADLSLETELFGQKLTMPVALAPVGLTGMLARRGEVQAAKAAQAKGVPFTLSTVSVCPIEEVQSQCAKPIWFQLYVLKDRGFMRNALERAQAAGINTLIFTVDMPVPGAR 164
[Close]
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_ESCF3 (L-lactate dehydrogenase [cytochrome] OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=lldD PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.095e-14
Identity = 46/158 (29.11%), Postives = 75/158 (47.47%), Query Frame = 1 
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++  A+  LP   + +  GGA  E+TL+ NVE   ++  R R+L ++S + L TT+ + K+S P+ +AP  L  +    GEV  A AA +      LS                  ++QLYV + R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYRAAAQRILPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAGAADAHGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGAR 164
[Close]
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_CITK8 (L-lactate dehydrogenase [cytochrome] OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=lldD PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.095e-14
Identity = 46/158 (29.11%), Postives = 74/158 (46.84%), Query Frame = 1 
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R R+L ++S + L TT+ + K+S P+ +AP  L  +    GEV  A AA +      LS                  ++QLYV + R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYRAAAQRILPPFLFHYIDGGAYAEYTLRRNVEDLSEVALRQRVLKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGAR 164
The following BLAST results are available for this feature:
BLAST of EY665295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
LLDD_ECO811.228e-1429.11L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO7I1.228e-1429.11L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO451.228e-1429.11L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ACIAD1.228e-1429.75L-lactate dehydrogenase [cytochrome] OS=Acinetobac... [more]
LLDD_XANCP1.604e-1430.38L-lactate dehydrogenase [cytochrome] OS=Xanthomona... [more]
LLDD_XANCB1.604e-1430.38L-lactate dehydrogenase [cytochrome] OS=Xanthomona... [more]
LLDD_XANC81.604e-1430.38L-lactate dehydrogenase [cytochrome] OS=Xanthomona... [more]
LLDD_AZOC51.604e-1428.48L-lactate dehydrogenase [cytochrome] OS=Azorhizobi... [more]
LLDD_ESCF32.095e-1429.11L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_CITK82.095e-1429.11L-lactate dehydrogenase [cytochrome] OS=Citrobacte... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-C07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665295 ID=EY665295; Name=EY665295; organism=Citrus sinensis; type=EST; length=962bp
CGATCGACCTTCATCAGTTGAAATTTTTAGTCATTCGGGTTCCAAATGGC
AGCTGAACCTGTTAATTTGAATGAGTTCCAAGAATTGGCAAGGCTGGCCC
TTCCAAAAATGTATTATGATTTCTACGCTGGTGGAGCAGAAGATGAACAT
ACCCTAAAAGAGAATGTGGAAGCCTTTCATAGAATTACGTTTCGGTCAAG
AATTCTTGTCGATGTCAGCAGAATTGATTTATCGACTACCATACTTGATT
ACAAAATCTCGGCTCCCATTATCATTGCTCCAACGGCTTTGCATAAGCTT
GCAAACCCTGAAGGAGAGGTAGCCACAGCCAGAGCAGCAGCTTCATGTAA
CACCATAATGGTTTTATCCTTCACATCTAGCAGCTCCATAGAGGAGGTTG
CGGCCAGCTCCAATGCTGTTCGCTTCTATCAATTATATGTATTCAAGAAA
CGAGATATAACAGCTACTCTAGTGCAAAGAGCTGAAAGGAAGGGTTTTAA
GGCTCTTGTCCTACCGGCTGATACTCCAAAACTTGGGAAAAAGGAGGCAA
ATATAAAAAAAAAAATTGATTTAAACCCCCCCTTTGTAAAACATATGNAN
GGCCNCTNNNNNNNCNNNNNNCNCGCCCNNNNCCCNCNCCCAAATTCNCA
ACCCCCCCCCCCCCCCCCCCCCCCGCNNCCCCCCCCNNNCNNNCNCNNCG
GGNNNCCCAACGGCCCCNNCCCCCCNCCCCCCCCCTCCCCCCTTTTTTTT
CCCCGGGGGTATTCTTTTCCCCCGGGGAAAAAAGGGCAAAAAAAAACCGT
GGGGGGAAAATAAGGGGGGTTGTGGTGGGGGATTTTTTTTGGCCCCCCCA
ATCCCCCGGGGCACCCCCCCCCCAACAGTTTAATTAAATTATTTTCACCC
CCCCCGCCCCCCCTTTTTTTTCTTCTCTCGGCCCCCGTGGGGAAAAAAAA
AGAGGGGTGGGG
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