EY665295

Overview
NameEY665295
Unique NameEY665295
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length962
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_XANC5 (L-lactate dehydrogenase [cytochrome] OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=lldD PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.736e-14
Identity = 47/158 (29.75%), Postives = 73/158 (46.20%), Query Frame = 1
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++  A+  LP   + +  GGA  EHTL+ NV     +  R R+L ++S + LST +    ++ P+ +AP  L  +    GEV  ARAAA+      LS                  ++QLYV K R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYRAAAQARLPPFLFHYIDGGAYAEHTLRRNVSDLADVALRQRVLRNMSDLRLSTELFGETLAMPVALAPVGLTGMYARRGEVQAARAAAARGIPFTLSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMRNALERAKAAGVTTLVFTVDMPTPGAR 164          
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_VIBCM (L-lactate dehydrogenase [cytochrome] OS=Vibrio cholerae serotype O1 (strain M66-2) GN=lldD PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.736e-14
Identity = 46/157 (29.30%), Postives = 73/157 (46.50%), Query Frame = 1
Query:   73 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            +++  A+  LP   + +  GG+  EHTL+ N +    I  R R+L D+S + L T +   K++ PI ++P  L  +    GEV  A+AA +      LS                  ++QLYV K R     +++RA+  G K LV   D P  G +
Sbjct:    8 DYRAAAKAKLPPFLFHYIDGGSYGEHTLRRNTDDLADIALRQRVLSDMSELSLETELFGEKMALPIALSPVGLTGMYARRGEVQAAQAAEAKGIPFTLSTVSVCPIEEVAPSIHRPIWFQLYVLKDRGFMKNVLERAKAAGVKNLVFTVDMPVPGAR 164          
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_VIBCH (L-lactate dehydrogenase [cytochrome] OS=Vibrio cholerae GN=lldD PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.736e-14
Identity = 46/157 (29.30%), Postives = 73/157 (46.50%), Query Frame = 1
Query:   73 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            +++  A+  LP   + +  GG+  EHTL+ N +    I  R R+L D+S + L T +   K++ PI ++P  L  +    GEV  A+AA +      LS                  ++QLYV K R     +++RA+  G K LV   D P  G +
Sbjct:    8 DYRAAAKAKLPPFLFHYIDGGSYGEHTLRRNTDDLADIALRQRVLSDMSELSLETELFGEKMALPIALSPVGLTGMYARRGEVQAAQAAEAKGIPFTLSTVSVCPIEEVAPSIHRPIWFQLYVLKDRGFMKNVLERAKAAGVKNLVFTVDMPVPGAR 164          
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_ECO27 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.736e-14
Identity = 46/158 (29.11%), Postives = 73/158 (46.20%), Query Frame = 1
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++  A+  LP   + +  GGA  E+TL  NVE    +  R RIL ++S + L TT+ + K+S P+ + P  L  +    GEV  A+AA +      LS                  ++QLYV + R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLHRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGAR 164          
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_BARHE (L-lactate dehydrogenase [cytochrome] OS=Bartonella henselae GN=lldD PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.736e-14
Identity = 47/157 (29.94%), Postives = 71/157 (45.22%), Query Frame = 1
Query:   73 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++ A+  LP   + +  GGA  E T++ N      +  R RIL  V  +DLST + D  +  PII+AP  L  +    GEV  ARAA +      LS                  ++QLYV K R     +++R+   G + LV   D P  G +
Sbjct:    8 DYRKAAKRRLPPFLFHYIDGGAYAEETMRRNYADLQALALRQRILRGVGEVDLSTKLFDQTLDLPIILAPVGLTGMYARRGEVQAARAAVAKGIPFTLSSVSVCPIAEVQKAVGSAFWFQLYVLKDRGFMRDVLERSWASGVRTLVFTVDMPVPGAR 164          
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_XANAC (L-lactate dehydrogenase [cytochrome] OS=Xanthomonas axonopodis pv. citri GN=lldD PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.573e-14
Identity = 47/158 (29.75%), Postives = 72/158 (45.57%), Query Frame = 1
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++  A   LP   + +  GGA  EHTL+ NV     +  R R+L ++S + LST +    ++ P+ +AP  L  +    GEV  ARAAA+      LS                  ++QLYV K R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYRAAAEARLPPFLFHYIDGGAYAEHTLRRNVSDLADVALRQRVLRNMSDLRLSTELFGETLAMPVALAPVGLTGMYARRGEVQAARAAAARGIPFTLSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMRNALERAKAAGVTTLVFTVDMPTPGAR 164          
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_ACIBY (L-lactate dehydrogenase [cytochrome] OS=Acinetobacter baumannii (strain AYE) GN=lldD PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.573e-14
Identity = 47/158 (29.75%), Postives = 71/158 (44.94%), Query Frame = 1
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            N+++  A+  LP   + +  GGA  E+TLK NV+    I  R R+L D+S + L T + +  +S P+ +AP  L  +    GEV  A AA        LS                  ++QLYV + R      ++RA+  G   LV   D P  G +
Sbjct:    7 NDYRAAAQRRLPPFLFHYIDGGAYAEYTLKRNVQDLSEIALRQRVLNDMSALSLETKLFNETLSMPVALAPVGLTGMYARRGEVQAAMAADKKGIPFTLSTVSVCPIEEVAPAINRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPVPGAR 164          
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_ACIBT (L-lactate dehydrogenase [cytochrome] OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=lldD PE=3 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 3.573e-14
Identity = 47/158 (29.75%), Postives = 71/158 (44.94%), Query Frame = 1
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            N+++  A+  LP   + +  GGA  E+TLK NV+    I  R R+L D+S + L T + +  +S P+ +AP  L  +    GEV  A AA        LS                  ++QLYV + R      ++RA+  G   LV   D P  G +
Sbjct:    7 NDYRAAAQRRLPPFLFHYIDGGAYAEYTLKRNVQDLSEIALRQRVLNDMSALSLETKLFNETLSMPVALAPVGLTGMYARRGEVQAAMAADKKGIPFTLSTVSVCPIEEVAPAINRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPVPGAR 164          
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_ACIBS (L-lactate dehydrogenase [cytochrome] OS=Acinetobacter baumannii (strain SDF) GN=lldD PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.573e-14
Identity = 47/158 (29.75%), Postives = 71/158 (44.94%), Query Frame = 1
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            N+++  A+  LP   + +  GGA  E+TLK NV+    I  R R+L D+S + L T + +  +S P+ +AP  L  +    GEV  A AA        LS                  ++QLYV + R      ++RA+  G   LV   D P  G +
Sbjct:    7 NDYRAAAQRRLPPFLFHYIDGGAYAEYTLKRNVQDLSEIALRQRVLNDMSALSLETKLFNETLSMPVALAPVGLTGMYARRGEVQAAMAADKKGIPFTLSTVSVCPIEEVAPAINRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPVPGAR 164          
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_ACIBC (L-lactate dehydrogenase [cytochrome] OS=Acinetobacter baumannii (strain ACICU) GN=lldD PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.573e-14
Identity = 47/158 (29.75%), Postives = 71/158 (44.94%), Query Frame = 1
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            N+++  A+  LP   + +  GGA  E+TLK NV+    I  R R+L D+S + L T + +  +S P+ +AP  L  +    GEV  A AA        LS                  ++QLYV + R      ++RA+  G   LV   D P  G +
Sbjct:    7 NDYRAAAQRRLPPFLFHYIDGGAYAEYTLKRNVQDLSEIALRQRVLNDMSALSLETKLFNETLSMPVALAPVGLTGMYARRGEVQAAMAADKKGIPFTLSTVSVCPIEEVAPAINRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPVPGAR 164          
The following BLAST results are available for this feature:
BLAST of EY665295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
LLDD_XANC52.736e-1429.75L-lactate dehydrogenase [cytochrome] OS=Xanthomona... [more]
LLDD_VIBCM2.736e-1429.30L-lactate dehydrogenase [cytochrome] OS=Vibrio cho... [more]
LLDD_VIBCH2.736e-1429.30L-lactate dehydrogenase [cytochrome] OS=Vibrio cho... [more]
LLDD_ECO272.736e-1429.11L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_BARHE2.736e-1429.94L-lactate dehydrogenase [cytochrome] OS=Bartonella... [more]
LLDD_XANAC3.573e-1429.75L-lactate dehydrogenase [cytochrome] OS=Xanthomona... [more]
LLDD_ACIBY3.573e-1429.75L-lactate dehydrogenase [cytochrome] OS=Acinetobac... [more]
LLDD_ACIBT3.573e-1429.75L-lactate dehydrogenase [cytochrome] OS=Acinetobac... [more]
LLDD_ACIBS3.573e-1429.75L-lactate dehydrogenase [cytochrome] OS=Acinetobac... [more]
LLDD_ACIBC3.573e-1429.75L-lactate dehydrogenase [cytochrome] OS=Acinetobac... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-C07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665295 ID=EY665295; Name=EY665295; organism=Citrus sinensis; type=EST; length=962bp
CGATCGACCTTCATCAGTTGAAATTTTTAGTCATTCGGGTTCCAAATGGC
AGCTGAACCTGTTAATTTGAATGAGTTCCAAGAATTGGCAAGGCTGGCCC
TTCCAAAAATGTATTATGATTTCTACGCTGGTGGAGCAGAAGATGAACAT
ACCCTAAAAGAGAATGTGGAAGCCTTTCATAGAATTACGTTTCGGTCAAG
AATTCTTGTCGATGTCAGCAGAATTGATTTATCGACTACCATACTTGATT
ACAAAATCTCGGCTCCCATTATCATTGCTCCAACGGCTTTGCATAAGCTT
GCAAACCCTGAAGGAGAGGTAGCCACAGCCAGAGCAGCAGCTTCATGTAA
CACCATAATGGTTTTATCCTTCACATCTAGCAGCTCCATAGAGGAGGTTG
CGGCCAGCTCCAATGCTGTTCGCTTCTATCAATTATATGTATTCAAGAAA
CGAGATATAACAGCTACTCTAGTGCAAAGAGCTGAAAGGAAGGGTTTTAA
GGCTCTTGTCCTACCGGCTGATACTCCAAAACTTGGGAAAAAGGAGGCAA
ATATAAAAAAAAAAATTGATTTAAACCCCCCCTTTGTAAAACATATGNAN
GGCCNCTNNNNNNNCNNNNNNCNCGCCCNNNNCCCNCNCCCAAATTCNCA
ACCCCCCCCCCCCCCCCCCCCCCCGCNNCCCCCCCCNNNCNNNCNCNNCG
GGNNNCCCAACGGCCCCNNCCCCCCNCCCCCCCCCTCCCCCCTTTTTTTT
CCCCGGGGGTATTCTTTTCCCCCGGGGAAAAAAGGGCAAAAAAAAACCGT
GGGGGGAAAATAAGGGGGGTTGTGGTGGGGGATTTTTTTTGGCCCCCCCA
ATCCCCCGGGGCACCCCCCCCCCAACAGTTTAATTAAATTATTTTCACCC
CCCCCGCCCCCCCTTTTTTTTCTTCTCTCGGCCCCCGTGGGGAAAAAAAA
AGAGGGGTGGGG
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