EY665295

Overview
NameEY665295
Unique NameEY665295
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length962
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_SALHS (L-lactate dehydrogenase [cytochrome] OS=Salmonella heidelberg (strain SL476) GN=lldD PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.094e-14
Identity = 45/158 (28.48%), Postives = 74/158 (46.84%), Query Frame = 1 
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++  A+  LP   + +  GGA  E+TL+ NVE   ++  R R+L ++S + L TT+ +  +S P+ +AP  L  +    GEV  A AA +      LS                  ++QLYV + R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIQRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGAR 164
[Close]
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_SALG2 (L-lactate dehydrogenase [cytochrome] OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=lldD PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.094e-14
Identity = 45/158 (28.48%), Postives = 74/158 (46.84%), Query Frame = 1 
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++  A+  LP   + +  GGA  E+TL+ NVE   ++  R R+L ++S + L TT+ +  +S P+ +AP  L  +    GEV  A AA +      LS                  ++QLYV + R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGAR 164
[Close]
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_SALEP (L-lactate dehydrogenase [cytochrome] OS=Salmonella enteritidis PT4 (strain P125109) GN=lldD PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.094e-14
Identity = 45/158 (28.48%), Postives = 74/158 (46.84%), Query Frame = 1 
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++  A+  LP   + +  GGA  E+TL+ NVE   ++  R R+L ++S + L TT+ +  +S P+ +AP  L  +    GEV  A AA +      LS                  ++QLYV + R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGAR 164
[Close]
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_SALDC (L-lactate dehydrogenase [cytochrome] OS=Salmonella dublin (strain CT_02021853) GN=lldD PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.094e-14
Identity = 45/158 (28.48%), Postives = 74/158 (46.84%), Query Frame = 1 
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++  A+  LP   + +  GGA  E+TL+ NVE   ++  R R+L ++S + L TT+ +  +S P+ +AP  L  +    GEV  A AA +      LS                  ++QLYV + R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGAR 164
[Close]
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_SALAR (L-lactate dehydrogenase [cytochrome] OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=lldD PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.094e-14
Identity = 45/158 (28.48%), Postives = 74/158 (46.84%), Query Frame = 1 
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++  A+  LP   + +  GGA  E+TL+ NVE   ++  R R+L ++S + L TT+ +  +S P+ +AP  L  +    GEV  A AA +      LS                  ++QLYV + R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTLKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGAR 164
[Close]
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_SALA4 (L-lactate dehydrogenase [cytochrome] OS=Salmonella agona (strain SL483) GN=lldD PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.094e-14
Identity = 45/158 (28.48%), Postives = 74/158 (46.84%), Query Frame = 1 
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++  A+  LP   + +  GGA  E+TL+ NVE   ++  R R+L ++S + L TT+ +  +S P+ +AP  L  +    GEV  A AA +      LS                  ++QLYV + R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGAR 164
[Close]
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_ENT38 (L-lactate dehydrogenase [cytochrome] OS=Enterobacter sp. (strain 638) GN=lldD PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.094e-14
Identity = 45/158 (28.48%), Postives = 72/158 (45.57%), Query Frame = 1 
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++  A+  LP   + +  GGA  EHTL+ NVE    +  R R+L ++S + L T + +  +S P+ +AP  L  +    GEV  A AA +      LS                  ++QLYV + R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYRAAAQRILPPFLFHYIDGGAYSEHTLRRNVEDLSEVALRQRVLKNMSDLSLETKLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADARGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGAR 164
[Close]
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_XANOR (L-lactate dehydrogenase [cytochrome] OS=Xanthomonas oryzae pv. oryzae GN=lldD PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.959e-14
Identity = 46/158 (29.11%), Postives = 72/158 (45.57%), Query Frame = 1 
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++  A+  LP   + +  GGA  EHTL+ NV     +  R R+L ++S + LST +    ++ P+ + P  L  +    GEV  ARAAA+      LS                  ++QLYV K R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYRAAAQARLPPFLFHYIDGGAYAEHTLRRNVSDLADVALRQRVLRNMSDLRLSTELFGETLAMPVALGPVGLTGMYARRGEVQAARAAAARGIPFTLSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMRNALERAKAAGVTTLVFTVDMPTPGAR 164
[Close]
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_XANOP (L-lactate dehydrogenase [cytochrome] OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=lldD PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.959e-14
Identity = 46/158 (29.11%), Postives = 72/158 (45.57%), Query Frame = 1 
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++  A+  LP   + +  GGA  EHTL+ NV     +  R R+L ++S + LST +    ++ P+ + P  L  +    GEV  ARAAA+      LS                  ++QLYV K R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYRAAAQARLPPFLFHYIDGGAYAEHTLRRNVSDLADVALRQRVLRNMSDLRLSTELFGETLAMPVALGPVGLTGMYARRGEVQAARAAAARGIPFTLSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMRNALERAKAAGVTTLVFTVDMPTPGAR 164
[Close]
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_XANOM (L-lactate dehydrogenase [cytochrome] OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=lldD PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.959e-14
Identity = 46/158 (29.11%), Postives = 72/158 (45.57%), Query Frame = 1 
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++  A+  LP   + +  GGA  EHTL+ NV     +  R R+L ++S + LST +    ++ P+ + P  L  +    GEV  ARAAA+      LS                  ++QLYV K R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYRAAAQARLPPFLFHYIDGGAYAEHTLRRNVSDLADVALRQRVLRNMSDLRLSTELFGETLAMPVALGPVGLTGMYARRGEVQAARAAAARGIPFTLSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMRNALERAKAAGVTTLVFTVDMPTPGAR 164
The following BLAST results are available for this feature:
BLAST of EY665295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
LLDD_SALHS6.094e-1428.48L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALG26.094e-1428.48L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALEP6.094e-1428.48L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALDC6.094e-1428.48L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALAR6.094e-1428.48L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALA46.094e-1428.48L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_ENT386.094e-1428.48L-lactate dehydrogenase [cytochrome] OS=Enterobact... [more]
LLDD_XANOR7.959e-1429.11L-lactate dehydrogenase [cytochrome] OS=Xanthomona... [more]
LLDD_XANOP7.959e-1429.11L-lactate dehydrogenase [cytochrome] OS=Xanthomona... [more]
LLDD_XANOM7.959e-1429.11L-lactate dehydrogenase [cytochrome] OS=Xanthomona... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-C07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665295 ID=EY665295; Name=EY665295; organism=Citrus sinensis; type=EST; length=962bp
CGATCGACCTTCATCAGTTGAAATTTTTAGTCATTCGGGTTCCAAATGGC
AGCTGAACCTGTTAATTTGAATGAGTTCCAAGAATTGGCAAGGCTGGCCC
TTCCAAAAATGTATTATGATTTCTACGCTGGTGGAGCAGAAGATGAACAT
ACCCTAAAAGAGAATGTGGAAGCCTTTCATAGAATTACGTTTCGGTCAAG
AATTCTTGTCGATGTCAGCAGAATTGATTTATCGACTACCATACTTGATT
ACAAAATCTCGGCTCCCATTATCATTGCTCCAACGGCTTTGCATAAGCTT
GCAAACCCTGAAGGAGAGGTAGCCACAGCCAGAGCAGCAGCTTCATGTAA
CACCATAATGGTTTTATCCTTCACATCTAGCAGCTCCATAGAGGAGGTTG
CGGCCAGCTCCAATGCTGTTCGCTTCTATCAATTATATGTATTCAAGAAA
CGAGATATAACAGCTACTCTAGTGCAAAGAGCTGAAAGGAAGGGTTTTAA
GGCTCTTGTCCTACCGGCTGATACTCCAAAACTTGGGAAAAAGGAGGCAA
ATATAAAAAAAAAAATTGATTTAAACCCCCCCTTTGTAAAACATATGNAN
GGCCNCTNNNNNNNCNNNNNNCNCGCCCNNNNCCCNCNCCCAAATTCNCA
ACCCCCCCCCCCCCCCCCCCCCCCGCNNCCCCCCCCNNNCNNNCNCNNCG
GGNNNCCCAACGGCCCCNNCCCCCCNCCCCCCCCCTCCCCCCTTTTTTTT
CCCCGGGGGTATTCTTTTCCCCCGGGGAAAAAAGGGCAAAAAAAAACCGT
GGGGGGAAAATAAGGGGGGTTGTGGTGGGGGATTTTTTTTGGCCCCCCCA
ATCCCCCGGGGCACCCCCCCCCCAACAGTTTAATTAAATTATTTTCACCC
CCCCCGCCCCCCCTTTTTTTTCTTCTCTCGGCCCCCGTGGGGAAAAAAAA
AGAGGGGTGGGG
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